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The map label for this gene is ydiC [C]

Identifier: 21672405

GI number: 21672405

Start: 127660

End: 128049

Strand: Reverse

Name: ydiC [C]

Synonym: BUsg114

Alternate gene names: 21672405

Gene position: 128049-127660 (Counterclockwise)

Preceding gene: 30410816

Following gene: 21672395

Centisome position: 19.96

GC content: 22.56

Gene sequence:

>390_bases
ATGAAAATAGAAAAAATGAATTTTTATTCACCAAAAAAATATAAATGGAAAGGTATTAAAATAACTGAACAAGCTATAGA
ACAAATTTTATTTTTAATTAATAAGAATCCTAAAAATAAAGGCATAAGAATAGGTACAAAAAAGTCTGGATGTGCAGGAT
TTCGATATACAATGGAATTAGTTAAAAATAATACAATAGAAAAAGAAAATAAAAATGATATAGTATTTTACTATAACAAT
ATTCTAGTATACATCTCCTTAAAAGAAGCACCATTTTTAAACGGCATAAAAATTGATTTTGTAAAAGATAGTATTAATGA
AGTATTTAAATACTGCAATCCTAGAATAAAAACATTCTGTGGTTGTGGAGAAAGTTTTTCAATTGATTAA

Upstream 100 bases:

>100_bases
CTTAAAAACAAAAAACTTAATTTATAATATAATTGTTTTTTTATATACTTGATAATCTTAGTATGATTAACAATCTTATT
TCATATTTAAAGAGAAAAAC

Downstream 100 bases:

>100_bases
AATAGCAAAAATCAATTAAAATTCTATTTATTCCAATAAATAAGACAGTGATTTTTTTTTCCTCTAGAAAGTAAGGTAAA
TTGATTAAATAATTTATCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 129; Mature: 129

Protein sequence:

>129_residues
MKIEKMNFYSPKKYKWKGIKITEQAIEQILFLINKNPKNKGIRIGTKKSGCAGFRYTMELVKNNTIEKENKNDIVFYYNN
ILVYISLKEAPFLNGIKIDFVKDSINEVFKYCNPRIKTFCGCGESFSID

Sequences:

>Translated_129_residues
MKIEKMNFYSPKKYKWKGIKITEQAIEQILFLINKNPKNKGIRIGTKKSGCAGFRYTMELVKNNTIEKENKNDIVFYYNN
ILVYISLKEAPFLNGIKIDFVKDSINEVFKYCNPRIKTFCGCGESFSID
>Mature_129_residues
MKIEKMNFYSPKKYKWKGIKITEQAIEQILFLINKNPKNKGIRIGTKKSGCAGFRYTMELVKNNTIEKENKNDIVFYYNN
ILVYISLKEAPFLNGIKIDFVKDSINEVFKYCNPRIKTFCGCGESFSID

Specific function: Unknown

COG id: COG0316

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hesB/iscA family

Homologues:

Organism=Homo sapiens, GI52426768, Length=111, Percent_Identity=32.4324324324324, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI1787974, Length=120, Percent_Identity=34.1666666666667, Blast_Score=112, Evalue=8e-27,
Organism=Escherichia coli, GI1788877, Length=111, Percent_Identity=40.5405405405405, Blast_Score=87, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI25146411, Length=111, Percent_Identity=34.2342342342342, Blast_Score=71, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI193209025, Length=128, Percent_Identity=31.25, Blast_Score=71, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24642263, Length=111, Percent_Identity=31.5315315315315, Blast_Score=69, Evalue=9e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y114_BUCAP (Q8KA13)

Other databases:

- EMBL:   AE013218
- RefSeq:   NP_660472.1
- ProteinModelPortal:   Q8KA13
- SMR:   Q8KA13
- EnsemblBacteria:   EBBUCT00000000451
- GeneID:   1005931
- GenomeReviews:   AE013218_GR
- KEGG:   bas:BUsg114
- GeneTree:   EBGT00050000008089
- HOGENOM:   HBG730174
- OMA:   HACGCGE
- ProtClustDB:   CLSK315423
- BioCyc:   BAPH198804:BUSG114-MONOMER
- InterPro:   IPR000361
- InterPro:   IPR016092
- InterPro:   IPR017870
- Gene3D:   G3DSA:2.60.300.12
- PANTHER:   PTHR10072
- TIGRFAMs:   TIGR00049

Pfam domain/function: PF01521 Fe-S_biosyn; SSF89360 HesB_yadR_yfhF-like

EC number: NA

Molecular weight: Translated: 15056; Mature: 15056

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: PS01152 HESB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIEKMNFYSPKKYKWKGIKITEQAIEQILFLINKNPKNKGIRIGTKKSGCAGFRYTMEL
CCCCCCCCCCCCCEEEECEEEHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHH
VKNNTIEKENKNDIVFYYNNILVYISLKEAPFLNGIKIDFVKDSINEVFKYCNPRIKTFC
HHCCCCCCCCCCCEEEEECCEEEEEEECCCCCCCCEEEEEEHHHHHHHHHHCCCCHHHHC
GCGESFSID
CCCCCCCCC
>Mature Secondary Structure
MKIEKMNFYSPKKYKWKGIKITEQAIEQILFLINKNPKNKGIRIGTKKSGCAGFRYTMEL
CCCCCCCCCCCCCEEEECEEEHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHH
VKNNTIEKENKNDIVFYYNNILVYISLKEAPFLNGIKIDFVKDSINEVFKYCNPRIKTFC
HHCCCCCCCCCCCEEEEECCEEEEEEECCCCCCCCEEEEEEHHHHHHHHHHCCCCHHHHC
GCGESFSID
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12089438