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The map label for this gene is yraL

Identifier: 21672375

GI number: 21672375

Start: 93737

End: 94594

Strand: Reverse

Name: yraL

Synonym: BUsg083

Alternate gene names: 21672375

Gene position: 94594-93737 (Counterclockwise)

Preceding gene: 21672380

Following gene: 21672373

Centisome position: 14.75

GC content: 24.83

Gene sequence:

>858_bases
GTGAATTCATTGAATAAAACTGGTCTTCTTTACATTGTTCCAACACCTATTGGAAATTTATCTGATATTACTTATCGAGC
TGTAGAAACACTAAAAAATGTTAATTTAATAGCAGCTGAAAATATTCATCATACTAATATTTTACTACAACATTACAACG
TTAAAAATATTTTAATATCTTTAAATAAAAATAATGAAAAAAAACAAAGTGATTATGTAATTAACGAACTAAAAAAAGGA
AAAAAAATTGCCTTAGTATCTGATGCAGGGACACCAGTTATTAACGATCCAGGTTATTTTTTAGTAAAAAAATGCTGTTT
TTTAAACATTAAAATCATTCCTCTCCCAGGACCTTGTGCAGCTATTACAGCACTGAGTGCTTCTGGAATATCTACTAATC
GTTTTTGCTATGAAGGATTTCTGCCTTCTAAAAAAAAAATAAGACGTGATTTATTAAAATCTTTAAAAAAAGAAATAAGG
ACAATAATTTTTTATGAATCGAAACATAGAATACTTGAAAGTATAAAAGATATTATAGAAACAATAGATGAAAATAGATA
TTTAGTAATCGCAAGAGAAATTACAAAAAAATGGGAGTATATATACGGTGCAAAAGCTAATATAATTCTGTCTTGGCTGA
AAGAAGATCAAAGTCGTTATAAAAAAGGCGAAATAGTAATTATTATAGATGGTTTTAAAGAATTAAAAAATAAAGATATT
TCAGCAAAAGCAATAAATACATTGACAATCTTAAGAAATTTTCTTTCATTAAAACAATCAGTATTTATTACTTCTAAAAT
ACATAAAATAAAAAAAAATGATTTATATCAACATGCAATAAAAGAAAAAGATAAGTGA

Upstream 100 bases:

>100_bases
TCTTTAACATCAAATTTACATATAAAAACAACTTAAATTTAATATTACTTATATAATAAATTATTATTTTTTTTTATTAC
AAAAAATATCTGGAAAAAAA

Downstream 100 bases:

>100_bases
CATTTCTATTAAAATAATATACAATTTATTATTTTGAAGTTGACTAAACAGTCGCTGTTTAGTTTTAAAACTAAAGAGAG
GAAAGTCCGGGCTCCATAGA

Product: hypothetical protein

Products: NA

Alternate protein names: 16S rRNA 2'-O-ribose C1402 methyltransferase; rRNA (cytidine-2'-O-)-methyltransferase RsmI

Number of amino acids: Translated: 285; Mature: 285

Protein sequence:

>285_residues
MNSLNKTGLLYIVPTPIGNLSDITYRAVETLKNVNLIAAENIHHTNILLQHYNVKNILISLNKNNEKKQSDYVINELKKG
KKIALVSDAGTPVINDPGYFLVKKCCFLNIKIIPLPGPCAAITALSASGISTNRFCYEGFLPSKKKIRRDLLKSLKKEIR
TIIFYESKHRILESIKDIIETIDENRYLVIAREITKKWEYIYGAKANIILSWLKEDQSRYKKGEIVIIIDGFKELKNKDI
SAKAINTLTILRNFLSLKQSVFITSKIHKIKKNDLYQHAIKEKDK

Sequences:

>Translated_285_residues
MNSLNKTGLLYIVPTPIGNLSDITYRAVETLKNVNLIAAENIHHTNILLQHYNVKNILISLNKNNEKKQSDYVINELKKG
KKIALVSDAGTPVINDPGYFLVKKCCFLNIKIIPLPGPCAAITALSASGISTNRFCYEGFLPSKKKIRRDLLKSLKKEIR
TIIFYESKHRILESIKDIIETIDENRYLVIAREITKKWEYIYGAKANIILSWLKEDQSRYKKGEIVIIIDGFKELKNKDI
SAKAINTLTILRNFLSLKQSVFITSKIHKIKKNDLYQHAIKEKDK
>Mature_285_residues
MNSLNKTGLLYIVPTPIGNLSDITYRAVETLKNVNLIAAENIHHTNILLQHYNVKNILISLNKNNEKKQSDYVINELKKG
KKIALVSDAGTPVINDPGYFLVKKCCFLNIKIIPLPGPCAAITALSASGISTNRFCYEGFLPSKKKIRRDLLKSLKKEIR
TIIFYESKHRILESIKDIIETIDENRYLVIAREITKKWEYIYGAKANIILSWLKEDQSRYKKGEIVIIIDGFKELKNKDI
SAKAINTLTILRNFLSLKQSVFITSKIHKIKKNDLYQHAIKEKDK

Specific function: Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA

COG id: COG0313

COG function: function code R; Predicted methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmI family

Homologues:

Organism=Escherichia coli, GI1789535, Length=279, Percent_Identity=52.6881720430108, Blast_Score=326, Evalue=1e-90,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RSMI_BUCAP (Q8KA29)

Other databases:

- EMBL:   AE013218
- RefSeq:   NP_660442.1
- ProteinModelPortal:   Q8KA29
- EnsemblBacteria:   EBBUCT00000000423
- GeneID:   1005900
- GenomeReviews:   AE013218_GR
- KEGG:   bas:BUsg083
- GeneTree:   EBGT00050000008212
- HOGENOM:   HBG529058
- OMA:   ASDRFCF
- ProtClustDB:   CLSK315242
- BioCyc:   BAPH198804:BUSG083-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01877
- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR008189
- InterPro:   IPR018063
- Gene3D:   G3DSA:3.40.1010.10
- TIGRFAMs:   TIGR00096

Pfam domain/function: PF00590 TP_methylase; SSF53790 Cor/por_Metransf

EC number: NA

Molecular weight: Translated: 32630; Mature: 32630

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: PS01296 RSMI

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSLNKTGLLYIVPTPIGNLSDITYRAVETLKNVNLIAAENIHHTNILLQHYNVKNILIS
CCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCEEEECCCEEHEEEEEEECEEEEEEE
LNKNNEKKQSDYVINELKKGKKIALVSDAGTPVINDPGYFLVKKCCFLNIKIIPLPGPCA
ECCCCCCHHHHHHHHHHCCCCEEEEEECCCCCEECCCCHHHHHHHHHEEEEEEECCCCHH
AITALSASGISTNRFCYEGFLPSKKKIRRDLLKSLKKEIRTIIFYESKHRILESIKDIIE
HHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHEEEECHHHHHHHHHHHHHH
TIDENRYLVIAREITKKWEYIYGAKANIILSWLKEDQSRYKKGEIVIIIDGFKELKNKDI
HHCCCCEEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEECCHHHHCCCCC
SAKAINTLTILRNFLSLKQSVFITSKIHKIKKNDLYQHAIKEKDK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNSLNKTGLLYIVPTPIGNLSDITYRAVETLKNVNLIAAENIHHTNILLQHYNVKNILIS
CCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCEEEECCCEEHEEEEEEECEEEEEEE
LNKNNEKKQSDYVINELKKGKKIALVSDAGTPVINDPGYFLVKKCCFLNIKIIPLPGPCA
ECCCCCCHHHHHHHHHHCCCCEEEEEECCCCCEECCCCHHHHHHHHHEEEEEEECCCCHH
AITALSASGISTNRFCYEGFLPSKKKIRRDLLKSLKKEIRTIIFYESKHRILESIKDIIE
HHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHEEEECHHHHHHHHHHHHHH
TIDENRYLVIAREITKKWEYIYGAKANIILSWLKEDQSRYKKGEIVIIIDGFKELKNKDI
HHCCCCEEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEECCHHHHCCCCC
SAKAINTLTILRNFLSLKQSVFITSKIHKIKKNDLYQHAIKEKDK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12089438