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The map label for this gene is yjeK [C]

Identifier: 21672314

GI number: 21672314

Start: 20390

End: 21403

Strand: Reverse

Name: yjeK [C]

Synonym: BUsg020

Alternate gene names: 21672314

Gene position: 21403-20390 (Counterclockwise)

Preceding gene: 21672316

Following gene: 21672306

Centisome position: 3.34

GC content: 23.77

Gene sequence:

>1014_bases
ATGAAACATTACAACACAAAAAAATTAAATAGAGAAAAAGATTCATGGTTATATGAAATTTCAAATTCTATTGTTGAACC
AAAAAAACTGTTAAAATTTCTTCATTTAGAAAAGTATCCAAAATATTACGATTCTAAACCAAAAAAAGTTTTTCCATTTC
GTGTTCCTTATTCTTTTGCATCAAGAATGAAAAAAAACGACCCTAAAGATCCATTATTATTACAAGTTATTACAAAAAAT
CAAGAATTTTTAAATAATTTACAATTTAACGAAGATCCTGTAAAAGAAAAAAAAGACATTGTTTTACCAGGACTATTACA
TAAATATAAAGATAGAGTATTATGGATATTAAAAACAAATTGTGCTATTAATTGTAGATATTGTTTTAGAAAACATTTTC
CATATGAAAAAAATAAAGGGAATAAAAAAAACTGGATTCAGATACTTCATTATATTAGTCAAAACATAGAGTTAAATGAA
GTCATTTTGTCAGGAGGAGATCCGTTAATGGCAAAAGATCATGAATTACTATGGCTTATTACATCTTTATCTAAAATAAA
ACACATAAAAAGATTAAGAATTCATACCAGACTACCTATTGTAATACCAAATCGAATAACTTCTGATCTCTGTCAAATTT
TTTCAAATTCTGTTTTAAAAATCATTATTGTTACTCATATTAATCATCCTCAAGAAATTAATGAACAATTAAGCGATAGT
CTATTGAAATTAAAAAAATCTAACGTTATTTTACTTAATCAAAGTGTTTTACTAAAAAACATAAACGATAATGCTATTAT
TTTAGCAGAACTGAGCAGTCGTTTATGTGAAAATAATATTATTCCATATTATTTACATATTTTAGATAAAGTTAAAGGAA
CGTCACATTTTTTAGTTTCAAATAAAAAAGCTAAATCTATCATATCAGATTTAATGAAAATGATATCAGGTTTTTTAGTA
CCGAGATTAGTTTTTGATAATGGATCGAAAGATAACAAGTTAATTATCATTTAG

Upstream 100 bases:

>100_bases
CTCTATTAAACAAGGTTCTTTTTCAAAAATAATTTTACGACCTGAACGAAAGTTATTACTATGATATACTCTCATAAAAA
CCTCTACTTTTAATAAATTT

Downstream 100 bases:

>100_bases
TATAAATAGTTAATTTTAATTTTTTTATTCTTAATAAAAAAATTAAAATCTTTCCTCAGACAAATATATCTGAGGAAAGA
TATCTTTAAATTAATTTAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 337; Mature: 337

Protein sequence:

>337_residues
MKHYNTKKLNREKDSWLYEISNSIVEPKKLLKFLHLEKYPKYYDSKPKKVFPFRVPYSFASRMKKNDPKDPLLLQVITKN
QEFLNNLQFNEDPVKEKKDIVLPGLLHKYKDRVLWILKTNCAINCRYCFRKHFPYEKNKGNKKNWIQILHYISQNIELNE
VILSGGDPLMAKDHELLWLITSLSKIKHIKRLRIHTRLPIVIPNRITSDLCQIFSNSVLKIIIVTHINHPQEINEQLSDS
LLKLKKSNVILLNQSVLLKNINDNAIILAELSSRLCENNIIPYYLHILDKVKGTSHFLVSNKKAKSIISDLMKMISGFLV
PRLVFDNGSKDNKLIII

Sequences:

>Translated_337_residues
MKHYNTKKLNREKDSWLYEISNSIVEPKKLLKFLHLEKYPKYYDSKPKKVFPFRVPYSFASRMKKNDPKDPLLLQVITKN
QEFLNNLQFNEDPVKEKKDIVLPGLLHKYKDRVLWILKTNCAINCRYCFRKHFPYEKNKGNKKNWIQILHYISQNIELNE
VILSGGDPLMAKDHELLWLITSLSKIKHIKRLRIHTRLPIVIPNRITSDLCQIFSNSVLKIIIVTHINHPQEINEQLSDS
LLKLKKSNVILLNQSVLLKNINDNAIILAELSSRLCENNIIPYYLHILDKVKGTSHFLVSNKKAKSIISDLMKMISGFLV
PRLVFDNGSKDNKLIII
>Mature_337_residues
MKHYNTKKLNREKDSWLYEISNSIVEPKKLLKFLHLEKYPKYYDSKPKKVFPFRVPYSFASRMKKNDPKDPLLLQVITKN
QEFLNNLQFNEDPVKEKKDIVLPGLLHKYKDRVLWILKTNCAINCRYCFRKHFPYEKNKGNKKNWIQILHYISQNIELNE
VILSGGDPLMAKDHELLWLITSLSKIKHIKRLRIHTRLPIVIPNRITSDLCQIFSNSVLKIIIVTHINHPQEINEQLSDS
LLKLKKSNVILLNQSVLLKNINDNAIILAELSSRLCENNIIPYYLHILDKVKGTSHFLVSNKKAKSIISDLMKMISGFLV
PRLVFDNGSKDNKLIII

Specific function: Unknown

COG id: COG1509

COG function: function code E; Lysine 2,3-aminomutase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the KamA family

Homologues:

Organism=Escherichia coli, GI1790589, Length=322, Percent_Identity=50, Blast_Score=360, Evalue=1e-101,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y020_BUCAP (Q44634)

Other databases:

- EMBL:   AE013218
- EMBL:   AF008210
- EMBL:   D85628
- RefSeq:   NP_660381.1
- ProteinModelPortal:   Q44634
- SMR:   Q44634
- EnsemblBacteria:   EBBUCT00000000105
- GeneID:   1005836
- GenomeReviews:   AE013218_GR
- KEGG:   bas:BUsg020
- GeneTree:   EBGT00050000008202
- HOGENOM:   HBG687451
- OMA:   ILVTHIN
- ProtClustDB:   CLSK380370
- BioCyc:   BAPH198804:BUSG020-MONOMER
- InterPro:   IPR013785
- InterPro:   IPR003739
- InterPro:   IPR022462
- InterPro:   IPR007197
- Gene3D:   G3DSA:3.20.20.70
- PIRSF:   PIRSF004911
- TIGRFAMs:   TIGR03821
- TIGRFAMs:   TIGR00238

Pfam domain/function: PF04055 Radical_SAM

EC number: NA

Molecular weight: Translated: 39502; Mature: 39502

Theoretical pI: Translated: 10.34; Mature: 10.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHYNTKKLNREKDSWLYEISNSIVEPKKLLKFLHLEKYPKYYDSKPKKVFPFRVPYSFA
CCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHCCCCCEEEEEECCHHHH
SRMKKNDPKDPLLLQVITKNQEFLNNLQFNEDPVKEKKDIVLPGLLHKYKDRVLWILKTN
HHHHCCCCCCCEEEEEECCCHHHHHCCCCCCCCCCCCCCEECHHHHHHHHCCEEEEEECC
CAINCRYCFRKHFPYEKNKGNKKNWIQILHYISQNIELNEVILSGGDPLMAKDHELLWLI
CEEEEHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCHHHHHH
TSLSKIKHIKRLRIHTRLPIVIPNRITSDLCQIFSNSVLKIIIVTHINHPQEINEQLSDS
HHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHH
LLKLKKSNVILLNQSVLLKNINDNAIILAELSSRLCENNIIPYYLHILDKVKGTSHFLVS
HHHHHCCCEEEEECCEEEECCCCCEEEHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEC
NKKAKSIISDLMKMISGFLVPRLVFDNGSKDNKLIII
CHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCEEEEC
>Mature Secondary Structure
MKHYNTKKLNREKDSWLYEISNSIVEPKKLLKFLHLEKYPKYYDSKPKKVFPFRVPYSFA
CCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHCCCCCEEEEEECCHHHH
SRMKKNDPKDPLLLQVITKNQEFLNNLQFNEDPVKEKKDIVLPGLLHKYKDRVLWILKTN
HHHHCCCCCCCEEEEEECCCHHHHHCCCCCCCCCCCCCCEECHHHHHHHHCCEEEEEECC
CAINCRYCFRKHFPYEKNKGNKKNWIQILHYISQNIELNEVILSGGDPLMAKDHELLWLI
CEEEEHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCHHHHHH
TSLSKIKHIKRLRIHTRLPIVIPNRITSDLCQIFSNSVLKIIIVTHINHPQEINEQLSDS
HHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHH
LLKLKKSNVILLNQSVLLKNINDNAIILAELSSRLCENNIIPYYLHILDKVKGTSHFLVS
HHHHHCCCEEEEECCEEEECCCCCEEEHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEC
NKKAKSIISDLMKMISGFLVPRLVFDNGSKDNKLIII
CHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12089438; 9516544