| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213693329
Identifier: 213693329
GI number: 213693329
Start: 2812168
End: 2813700
Strand: Direct
Name: 213693329
Synonym: Blon_2483
Alternate gene names: NA
Gene position: 2812168-2813700 (Clockwise)
Preceding gene: 213693328
Following gene: 213693330
Centisome position: 99.27
GC content: 58.19
Gene sequence:
>1533_bases ATGGCACGGCGTTGGACCCCGCAGCGGTTTGTTACACTGCGTCGCATCCGCGTAATCGCCTGTATCGCGGCGACCAGTAT CGCGCTGGCTGGATCATTCGCGTTCACCGCGCGTAAATCCGTAGCCCTGAACATCAACGGGCAAACCACCCAAGTCACCA CATATGCGATGACGGCCACCCGTCTTCTGGAGGAACAAGGGGTGGATATCAAGACCCACGATATCGTCACTACCTCGTCC GGCGACCAACTCGCCAATCATGCCGTGGTCACCGTACAGTCCGCCTACCAGACCACTATCAACATCGACGGCACGTCCGT TCCCTTCTGGACCGTGGCCACCAGTGCCGACCAGCTGCTGGGATTTTTCGAGGAAAACCAGAACAACGCCACAAAAATCA CCGTCGACATCAACAATGTGTACAACCAGCTCACCGGCGGACTGGTCATCAATCAGGATGGCCCGGTCACCGTCATTGCG GACGGCAAGACTTCCGTGGCCCCCAACGGCAAACTGCCCGCGGCCTCCATTCTTGACTCCAAAGGCATCGTGCTGAACAA AGAGGACCGTGTGAGCGTCGAAAAGGACGGCGATACCACTATCCTGCGCGTACGGCGCGTGACGCATGGCGAGGAAACAC GCACAGCCATAGTGCCATACTCCACACAAACCATCATCGACTCCAATCTTCCTGAAGGCCAGTCGGAGATCCGTCAGCAA GGCGTCAATGGCGAGAAAACCCAGGTGTATAACGTCACGTATGTCGATGGCGTGGCCGAATCGGAGACGCTGAAATCCGA AACCGTCACCACGATGGCCATCGACCAGATCATCGCCGTAGGCGCCGCCAAGTCTGATACCGATAAGGGTTCCGATAAAG GTTCCGACAAAAAATCCGACTCCGCCGATAACGGCAAGGCCGATTCCGGTTTCAACAATCAGCACGAGTCGTCCGGTAAC AATGCCAACAACACAGGCGACAAGAACAACAGCAGCTCTGGCAACAACACGAACACCGATACCAACAACAATGCCGGCAA CACCGGCGGCAACACCGGCGGCAACAACTCCGGTAACACCGGCAACACCGGCAACACCGGCAACACCGGCAATTCCGGTA ACACTGGTAATTCCGGTAACACCGGCGGCGGTACGAACAACAATTCCGGCTCTTCCGGCTCCGATTCAGGAACAACCACC ACGCCCTCCGGCCGACTCTGGCACGCCACCGTAGCCCAGGCTCAGGCCTATGCCGCCGGTGCCGCCGCGCAGCGCGGGTG GACAGGCAACGACTGGGATTGCCTGGTCAAACTATGGAACCGCGAGTCCCGTTGGCTGTGGTATGCCGAAAACGCGAGCT CCGGTGCCTACGGCATTCCTCAGTCGCGACCAGCAGACAAAATGGCTGCGTTCGGCGCCAATTACCGTGACGATGCCGCC GTACAGATCGATTGGGGTCTGTGGTACATCGCACAAACCTACGGCAGCCCGTCCAAGGCATGGCAACATTCCGAACAAAT CGGTTGGTACTGA
Upstream 100 bases:
>100_bases GAGCAGGAATGGTGACGGTGGCCGGTGAAACCGCAGTACGGGTCCGAACAACCGTTACGATGGGTGGCGTAATCGTTCAC CCAGCAGGAAGAGTATGGCA
Downstream 100 bases:
>100_bases TCGGTTACGAAGCCCACAAGGAACACACGCTTATGAACGACACCATTCCCGCCACCGGTCACCTGTTAGGTGCCGCCGAT ATCCGTCGTATCGCGGCCGA
Product: G5 domain protein
Products: NA
Alternate protein names: G5 Domain Protein; Transglycosylase Domain-Containing Protein; Transglycosylase Domain Protein; G5 Domain-Containing Protein; TraG-Related Protein; Membrane-Bound Transglycosylase; Transglycosylase; 3D Domain-Containing Protein; Peptidase S1 And S6 Chymotrypsin/Hap; Transglycosylase Domain Containing Protein; TraG-Like Protein; Transglycosylase-Like Domain Protein; Resuscitation-Promoting Factor RpfB; Immunogenic Secreted Protein
Number of amino acids: Translated: 510; Mature: 509
Protein sequence:
>510_residues MARRWTPQRFVTLRRIRVIACIAATSIALAGSFAFTARKSVALNINGQTTQVTTYAMTATRLLEEQGVDIKTHDIVTTSS GDQLANHAVVTVQSAYQTTINIDGTSVPFWTVATSADQLLGFFEENQNNATKITVDINNVYNQLTGGLVINQDGPVTVIA DGKTSVAPNGKLPAASILDSKGIVLNKEDRVSVEKDGDTTILRVRRVTHGEETRTAIVPYSTQTIIDSNLPEGQSEIRQQ GVNGEKTQVYNVTYVDGVAESETLKSETVTTMAIDQIIAVGAAKSDTDKGSDKGSDKKSDSADNGKADSGFNNQHESSGN NANNTGDKNNSSSGNNTNTDTNNNAGNTGGNTGGNNSGNTGNTGNTGNTGNSGNTGNSGNTGGGTNNNSGSSGSDSGTTT TPSGRLWHATVAQAQAYAAGAAAQRGWTGNDWDCLVKLWNRESRWLWYAENASSGAYGIPQSRPADKMAAFGANYRDDAA VQIDWGLWYIAQTYGSPSKAWQHSEQIGWY
Sequences:
>Translated_510_residues MARRWTPQRFVTLRRIRVIACIAATSIALAGSFAFTARKSVALNINGQTTQVTTYAMTATRLLEEQGVDIKTHDIVTTSS GDQLANHAVVTVQSAYQTTINIDGTSVPFWTVATSADQLLGFFEENQNNATKITVDINNVYNQLTGGLVINQDGPVTVIA DGKTSVAPNGKLPAASILDSKGIVLNKEDRVSVEKDGDTTILRVRRVTHGEETRTAIVPYSTQTIIDSNLPEGQSEIRQQ GVNGEKTQVYNVTYVDGVAESETLKSETVTTMAIDQIIAVGAAKSDTDKGSDKGSDKKSDSADNGKADSGFNNQHESSGN NANNTGDKNNSSSGNNTNTDTNNNAGNTGGNTGGNNSGNTGNTGNTGNTGNSGNTGNSGNTGGGTNNNSGSSGSDSGTTT TPSGRLWHATVAQAQAYAAGAAAQRGWTGNDWDCLVKLWNRESRWLWYAENASSGAYGIPQSRPADKMAAFGANYRDDAA VQIDWGLWYIAQTYGSPSKAWQHSEQIGWY >Mature_509_residues ARRWTPQRFVTLRRIRVIACIAATSIALAGSFAFTARKSVALNINGQTTQVTTYAMTATRLLEEQGVDIKTHDIVTTSSG DQLANHAVVTVQSAYQTTINIDGTSVPFWTVATSADQLLGFFEENQNNATKITVDINNVYNQLTGGLVINQDGPVTVIAD GKTSVAPNGKLPAASILDSKGIVLNKEDRVSVEKDGDTTILRVRRVTHGEETRTAIVPYSTQTIIDSNLPEGQSEIRQQG VNGEKTQVYNVTYVDGVAESETLKSETVTTMAIDQIIAVGAAKSDTDKGSDKGSDKKSDSADNGKADSGFNNQHESSGNN ANNTGDKNNSSSGNNTNTDTNNNAGNTGGNTGGNNSGNTGNTGNTGNTGNSGNTGNSGNTGGGTNNNSGSSGSDSGTTTT PSGRLWHATVAQAQAYAAGAAAQRGWTGNDWDCLVKLWNRESRWLWYAENASSGAYGIPQSRPADKMAAFGANYRDDAAV QIDWGLWYIAQTYGSPSKAWQHSEQIGWY
Specific function: Unknown
COG id: COG3583
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53951; Mature: 53820
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: PS51109 G5
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARRWTPQRFVTLRRIRVIACIAATSIALAGSFAFTARKSVALNINGQTTQVTTYAMTAT CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCEEEEEECCCEEEEEEEHHHHH RLLEEQGVDIKTHDIVTTSSGDQLANHAVVTVQSAYQTTINIDGTSVPFWTVATSADQLL HHHHHCCCCEEECEEEEECCCCHHHCCEEEEEECCEEEEEEECCCCCCEEEEECCHHHHH GFFEENQNNATKITVDINNVYNQLTGGLVINQDGPVTVIADGKTSVAPNGKLPAASILDS HHHHCCCCCEEEEEEEHHHHHHHHHCCEEEECCCCEEEEECCCCCCCCCCCCCHHHHHCC KGIVLNKEDRVSVEKDGDTTILRVRRVTHGEETRTAIVPYSTQTIIDSNLPEGQSEIRQQ CCCEECCCCCEEEECCCCEEEEEEEECCCCCCCCEEEECCCCCEEECCCCCCCHHHHHHC GVNGEKTQVYNVTYVDGVAESETLKSETVTTMAIDQIIAVGAAKSDTDKGSDKGSDKKSD CCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC SADNGKADSGFNNQHESSGNNANNTGDKNNSSSGNNTNTDTNNNAGNTGGNTGGNNSGNT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GNTGNTGNTGNSGNTGNSGNTGGGTNNNSGSSGSDSGTTTTPSGRLWHATVAQAQAYAAG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCEEEHHHHHHHHHHHH AAAQRGWTGNDWDCLVKLWNRESRWLWYAENASSGAYGIPQSRPADKMAAFGANYRDDAA HHHHCCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHCCCCCCCCE VQIDWGLWYIAQTYGSPSKAWQHSEQIGWY EEEECCEEEEEECCCCHHHHHHCCHHCCCC >Mature Secondary Structure ARRWTPQRFVTLRRIRVIACIAATSIALAGSFAFTARKSVALNINGQTTQVTTYAMTAT CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCEEEEEECCCEEEEEEEHHHHH RLLEEQGVDIKTHDIVTTSSGDQLANHAVVTVQSAYQTTINIDGTSVPFWTVATSADQLL HHHHHCCCCEEECEEEEECCCCHHHCCEEEEEECCEEEEEEECCCCCCEEEEECCHHHHH GFFEENQNNATKITVDINNVYNQLTGGLVINQDGPVTVIADGKTSVAPNGKLPAASILDS HHHHCCCCCEEEEEEEHHHHHHHHHCCEEEECCCCEEEEECCCCCCCCCCCCCHHHHHCC KGIVLNKEDRVSVEKDGDTTILRVRRVTHGEETRTAIVPYSTQTIIDSNLPEGQSEIRQQ CCCEECCCCCEEEECCCCEEEEEEEECCCCCCCCEEEECCCCCEEECCCCCCCHHHHHHC GVNGEKTQVYNVTYVDGVAESETLKSETVTTMAIDQIIAVGAAKSDTDKGSDKGSDKKSD CCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC SADNGKADSGFNNQHESSGNNANNTGDKNNSSSGNNTNTDTNNNAGNTGGNTGGNNSGNT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GNTGNTGNTGNSGNTGNSGNTGGGTNNNSGSSGSDSGTTTTPSGRLWHATVAQAQAYAAG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCEEEHHHHHHHHHHHH AAAQRGWTGNDWDCLVKLWNRESRWLWYAENASSGAYGIPQSRPADKMAAFGANYRDDAA HHHHCCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHCCCCCCCCE VQIDWGLWYIAQTYGSPSKAWQHSEQIGWY EEEECCEEEEEECCCCHHHHHHCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA