| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is yegS [C]
Identifier: 213693032
GI number: 213693032
Start: 2416075
End: 2417256
Strand: Direct
Name: yegS [C]
Synonym: Blon_2179
Alternate gene names: 213693032
Gene position: 2416075-2417256 (Clockwise)
Preceding gene: 213693023
Following gene: 213693034
Centisome position: 85.29
GC content: 65.57
Gene sequence:
>1182_bases ATGCCTCAGCCTGCCCTCACCGTGTTTCTGATCATCGCCGCAATCGCCATTGTGGCGGCGCTCATCGCCGTCACCGTCAT CGCCCTGCGCGCGCAGCGCCGCCGCAAGCTGGCTCAGACGCTGGAGAAGCGCCGGGACGACGAGGTGCAGTACGCCTTCA TCGTGAATCCGTCCAAACCGCAGGCCGAAGCCCGCCGGCTGCATATCCAGAGGTTCTGCGAAGCCAAGGGGCTCAATCGC ATCCGCTTCTACGACACCCAGCTTGACAAGGACGGCAGAGTCTGCGCGCTTGAAGCGCTGGAGGACGGCGCCGACGTGGT GATCGCGGTCGGCGGCGACGGCACGGTGCGCACGGTGGCGAGCGCCGTCTCCGGCACCGGCCATGCGCTGGGCATCATCC CCATCGGCACCGGCAACCTGTTTGCCCGCAATATGGGCGTTCCCGTGGACGATATCGACGCCGCGCTGACCGTGGCCACC TCCCACGGCTCCCGCCTGGTGGACATGGGCCGTCTCACCCTGCTCGACCACCCGGAGGACGACCACGGCCACGCCTTCCT CATCATCGCCGGCATCGGCTTCGATGCGGCCATGATCGACGACACCAACCCCGAGCTCAAGGCGAACATCAGCTGGCTCG CCTACTTCGTGGGCGGCGTGAAGAACCTGTTCGCGCCGAAGTTCCGCGGCACGCTGACAGTCACCAGCGCCGACGGCTCG ACCCACACCATCAAGAATCTCGATTTCCGCACGGTGATGGCCGGCAACTGCGGCCAAATTCCCGTGTTCTCGCTGATGCC GGCGGCCTCCTATGACGACGGCCTGCTGGACTTCGAAATCATCGACACCACTGGCGGCATCCTCGGCTGGGCCAACCTGT TCGGCGACGTGGTGCACCAGACGATCATCGGCAAGCCCGAGCAGAACCCGCTGTCCACGAATTCGACCATCGAGCAGGTG CAGGGCGTCAGCGCCGAAATCACGCTGGAGAAGCCGGCCAAGGCACAAGTGGACGGCGACATGCTGCCGGAAACCCGCCA CATCCGTTTCTCGGTGGATCACCGCGCGCTGATCGTGCGCGTGCCCGACGCCTCCGCGTTGGAAAAGACCGCGCAGGCCG CCGCTTCGAACGCCACCTCGGATTTCGCCGAAATGACCGGCACACTTGAGCCGATTCGCTGA
Upstream 100 bases:
>100_bases TGAACCATGATCGCGTCCCACGGGCTGTTGCGTGCAGGAAATGTTCACGTACGGCGCACCATGGCCGTAAACGACCTCCC CACCGATAACAATAGGAGCC
Downstream 100 bases:
>100_bases TTCACTGGCTCATATGCGCCAGCCGCGGATGGTCGGGAATATCCGAGGAACGATTCTGATTCGTTTGATCCGTGACTCGT GCCACATGCAATGTCAGGTA
Product: diacylglycerol kinase, catalytic region
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 393; Mature: 392
Protein sequence:
>393_residues MPQPALTVFLIIAAIAIVAALIAVTVIALRAQRRRKLAQTLEKRRDDEVQYAFIVNPSKPQAEARRLHIQRFCEAKGLNR IRFYDTQLDKDGRVCALEALEDGADVVIAVGGDGTVRTVASAVSGTGHALGIIPIGTGNLFARNMGVPVDDIDAALTVAT SHGSRLVDMGRLTLLDHPEDDHGHAFLIIAGIGFDAAMIDDTNPELKANISWLAYFVGGVKNLFAPKFRGTLTVTSADGS THTIKNLDFRTVMAGNCGQIPVFSLMPAASYDDGLLDFEIIDTTGGILGWANLFGDVVHQTIIGKPEQNPLSTNSTIEQV QGVSAEITLEKPAKAQVDGDMLPETRHIRFSVDHRALIVRVPDASALEKTAQAAASNATSDFAEMTGTLEPIR
Sequences:
>Translated_393_residues MPQPALTVFLIIAAIAIVAALIAVTVIALRAQRRRKLAQTLEKRRDDEVQYAFIVNPSKPQAEARRLHIQRFCEAKGLNR IRFYDTQLDKDGRVCALEALEDGADVVIAVGGDGTVRTVASAVSGTGHALGIIPIGTGNLFARNMGVPVDDIDAALTVAT SHGSRLVDMGRLTLLDHPEDDHGHAFLIIAGIGFDAAMIDDTNPELKANISWLAYFVGGVKNLFAPKFRGTLTVTSADGS THTIKNLDFRTVMAGNCGQIPVFSLMPAASYDDGLLDFEIIDTTGGILGWANLFGDVVHQTIIGKPEQNPLSTNSTIEQV QGVSAEITLEKPAKAQVDGDMLPETRHIRFSVDHRALIVRVPDASALEKTAQAAASNATSDFAEMTGTLEPIR >Mature_392_residues PQPALTVFLIIAAIAIVAALIAVTVIALRAQRRRKLAQTLEKRRDDEVQYAFIVNPSKPQAEARRLHIQRFCEAKGLNRI RFYDTQLDKDGRVCALEALEDGADVVIAVGGDGTVRTVASAVSGTGHALGIIPIGTGNLFARNMGVPVDDIDAALTVATS HGSRLVDMGRLTLLDHPEDDHGHAFLIIAGIGFDAAMIDDTNPELKANISWLAYFVGGVKNLFAPKFRGTLTVTSADGST HTIKNLDFRTVMAGNCGQIPVFSLMPAASYDDGLLDFEIIDTTGGILGWANLFGDVVHQTIIGKPEQNPLSTNSTIEQVQ GVSAEITLEKPAKAQVDGDMLPETRHIRFSVDHRALIVRVPDASALEKTAQAAASNATSDFAEMTGTLEPIR
Specific function: Unknown
COG id: COG1597
COG function: function code IR; Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 DAGKc domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001206 - InterPro: IPR004363 - InterPro: IPR018148 - InterPro: IPR011607 [H]
Pfam domain/function: PF00781 DAGK_cat; PF02142 MGS [H]
EC number: NA
Molecular weight: Translated: 42127; Mature: 41995
Theoretical pI: Translated: 5.40; Mature: 5.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQPALTVFLIIAAIAIVAALIAVTVIALRAQRRRKLAQTLEKRRDDEVQYAFIVNPSKP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCC QAEARRLHIQRFCEAKGLNRIRFYDTQLDKDGRVCALEALEDGADVVIAVGGDGTVRTVA HHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEECCCCCCEEEEECCCCHHHHHH SAVSGTGHALGIIPIGTGNLFARNMGVPVDDIDAALTVATSHGSRLVDMGRLTLLDHPED HHHCCCCCEEEEEEECCCCEEEECCCCCCCCCCCEEEEEECCCCEEEECCCEEEECCCCC DHGHAFLIIAGIGFDAAMIDDTNPELKANISWLAYFVGGVKNLFAPKFRGTLTVTSADGS CCCEEEEEEEECCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCC THTIKNLDFRTVMAGNCGQIPVFSLMPAASYDDGLLDFEIIDTTGGILGWANLFGDVVHQ CEEEECCCEEEEECCCCCCCCHHHCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHH TIIGKPEQNPLSTNSTIEQVQGVSAEITLEKPAKAQVDGDMLPETRHIRFSVDHRALIVR HHCCCCCCCCCCCCCHHHHHCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEECCEEEEEE VPDASALEKTAQAAASNATSDFAEMTGTLEPIR CCCHHHHHHHHHHHHCCCHHHHHHHCCCCCCCC >Mature Secondary Structure PQPALTVFLIIAAIAIVAALIAVTVIALRAQRRRKLAQTLEKRRDDEVQYAFIVNPSKP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCC QAEARRLHIQRFCEAKGLNRIRFYDTQLDKDGRVCALEALEDGADVVIAVGGDGTVRTVA HHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEECCCCCCEEEEECCCCHHHHHH SAVSGTGHALGIIPIGTGNLFARNMGVPVDDIDAALTVATSHGSRLVDMGRLTLLDHPED HHHCCCCCEEEEEEECCCCEEEECCCCCCCCCCCEEEEEECCCCEEEECCCEEEECCCCC DHGHAFLIIAGIGFDAAMIDDTNPELKANISWLAYFVGGVKNLFAPKFRGTLTVTSADGS CCCEEEEEEEECCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCC THTIKNLDFRTVMAGNCGQIPVFSLMPAASYDDGLLDFEIIDTTGGILGWANLFGDVVHQ CEEEECCCEEEEECCCCCCCCHHHCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHH TIIGKPEQNPLSTNSTIEQVQGVSAEITLEKPAKAQVDGDMLPETRHIRFSVDHRALIVR HHCCCCCCCCCCCCCHHHHHCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEECCEEEEEE VPDASALEKTAQAAASNATSDFAEMTGTLEPIR CCCHHHHHHHHHHHHCCCHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]