Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

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The map label for this gene is 213693017

Identifier: 213693017

GI number: 213693017

Start: 2395036

End: 2397096

Strand: Direct

Name: 213693017

Synonym: Blon_2164

Alternate gene names: NA

Gene position: 2395036-2397096 (Clockwise)

Preceding gene: 213693016

Following gene: 213693018

Centisome position: 84.55

GC content: 58.9

Gene sequence:

>2061_bases
ATGGCCGATGATGCGATGGACGCGCGGCTGGAGCAGGCACTGCTCGGCATGCAGGCGAAACACGCACATGATTTCGATGC
GCCTGAAAACGGCCCGGCGGCTCAGGGCGGCAACGAACTGCATGACTTTGACGTGAACGAATTCCTCCACGGCCTCGACG
CCATCTTCGACGCCCACAACGCCGCAGAAAAGGCGGGCCCGTATCTTGAACAAGCGGCGGTCGACGCGGAAAACGCCGGA
GACGAAGCCGGACTGCTGACCGTACTCAACGAGACGATGGGGTTCTACCGCTCGCAAGGCCGTCACAAGGAGAACCAGTG
GATCGTGCAGCGCGCGCTTGAGTTGGCCCTGCACATGGGGCTTGAGGGTACCGAAAGCTGGGCCACTACGCTGATCAATT
GTGCCACTGCCATGCGCGCGGCCAAGCGGTACGATCAGGCCGAGGATCTGTATCATCAAGCGTTGGATTGCGCCAATAAG
AACTTCGCTCCCAACGACCGACGCCTGGCTGCGCTGCATAATAACCTCTCCATGTTGTACAGCGAAACGAACCGATTGCC
ACAGGCGGAAATCGAGCTCAGGCAGGCGTTGCACATCGTCGAGGCGGCGAGCGTGAATCCTGATGCCGACATCGACGTGG
CCTCGTCGAACACCAATCTGGCTCTGGTACTGCTGCAGGAGAGCAAGCTCAAGGAAGCGCACATCCATGCCACCAAAGCG
TTGACCATCTATGAGACTGGCAAGCTGACGCACTCGGCGCATTATGCCTCCGCATTGGCTGGCTGTGCGCAAGTGCTGTA
TGTCGAACACCGATATGGCGAGGCGGCCTCTCATTACCGCAGCGCTTTGGCGGTGATCGCCGAATGCTATGGCAAGGACA
CCGATTACTATCGCGTCACCGAGGCGAACCTGCGCGAAGCCGAGGCGCAAATCGGTAACGATGACGTGCATGCAGCGAAC
AGCGCCGATGCAACCAGCACCGAAACTAATACCAACACCGATGCCACTGCCGAAATCGCTGTGTCCGGTCTCAAATTGGC
ACGCGCGTTCTGGACACAGGTGGGCAAGCCGATGATTACGGCACAGTATCCGCAATACGTGGGCCGCATTGCCGCCGGAC
TGGTGGGGCATGGTTCGGAATGCTATGGCTTTGACGACGCCTATTCTCAAGACCATGATTTTGGCCCACGCTTCTGTCTA
TGGCTTACCGATGATGATTATGAGGCAATCGGCGAGCAGCTCGAGGCCGATTATGAAGCACTGCCACGCGGGTTCACGAT
GGACGCGCAAGGCCGTGTGACATTTATCGATATACCGTTCTCCCCCACCACGCCCCGCGCACAAGGTGCCAACCGCCGTG
ACGGCGTGTTCCGCATCGGTGACTTCTTTGAGTCGATCACCGGGTATCGCACTGCGCCCGCGCAAACCGCGCCGCACGAG
TGGCTGATGCTGGCTGAATCGACTCTGGCCGCAGCCACCAATGGCGAAGTATTCGCAGACCCCACTGGGCAGTTCTCCAA
AACACGCCAAGGGTTCAAGGATATGCCCGACGACGTGCGGCTTGCCTTGATTTCCAAGCGATTGGGCATGATCGCCCAGG
CCGGTCAATATAATCTTCCGCGTTCGTTGAAACGCGGCGACAGCGCGGCCGCATGGCTGTCCATCCACGAGTTCGTGCAG
GCCACCGCCTCGTTGGTGTTCCTGGTTAACGTGCCGATGGTGGTGGGCTATATGCCGTATTACAAGTGGCAGTTCGCAGC
ATTGCGCAAGCTGTCTGGCTCGATGTTCGCGCTGTTGCCGAACGTGGGCGAACAGTTGGAAACCGTGATGCGATTGAGTT
CGGCAGCCTGCTATGGCGGGGCCGGATTCGGCGAAGGCGGCAAGGGCGCGGCTACAGCAATCAAGAAAATCAACGATATC
GTGGAGCAGATTGCGGCGGATATCGTCAAGGAACTCAAACGCGAACACCTGACCACGTCCGGCGAGACCTTCCTCGAATG
GCAGCGCCCGTATGTCGAGGACCACATCGCCTCTGATGATCCGGTGCTTAAAAGTTTGTAG

Upstream 100 bases:

>100_bases
GCCGCACACTGTAACGACACTCACATCGGCGGTCTCCAAATCGTTCACAGTACGCTGGAACCTAGCAATAATCGGTATCT
CACGACGAAGGAGATTATGT

Downstream 100 bases:

>100_bases
ATTCAAGCTCCCTCTGTCACGGCTTCGCCGTGCCATCTCCCTCATCAGAGGATTAGTGAAAGGAACGTCGATGACCAACG
AACTGACTGATGATGAACTG

Product: Tetratricopeptide TPR_2 repeat protein

Products: NA

Alternate protein names: Tetratricopeptide Repeat Family; Tetratricopeptide TPR_2 Repeat Protein; NB-ARC Domain-Containing Protein; TPR-Repeat-Containing Protein; Tetratricopeptide Repeats Containing Protein; Tetratricopeptide Repeat-Containing Protein; Tetratricopeptide Domain-Containing Protein; Tetratricopeptide Repeat Protein

Number of amino acids: Translated: 686; Mature: 685

Protein sequence:

>686_residues
MADDAMDARLEQALLGMQAKHAHDFDAPENGPAAQGGNELHDFDVNEFLHGLDAIFDAHNAAEKAGPYLEQAAVDAENAG
DEAGLLTVLNETMGFYRSQGRHKENQWIVQRALELALHMGLEGTESWATTLINCATAMRAAKRYDQAEDLYHQALDCANK
NFAPNDRRLAALHNNLSMLYSETNRLPQAEIELRQALHIVEAASVNPDADIDVASSNTNLALVLLQESKLKEAHIHATKA
LTIYETGKLTHSAHYASALAGCAQVLYVEHRYGEAASHYRSALAVIAECYGKDTDYYRVTEANLREAEAQIGNDDVHAAN
SADATSTETNTNTDATAEIAVSGLKLARAFWTQVGKPMITAQYPQYVGRIAAGLVGHGSECYGFDDAYSQDHDFGPRFCL
WLTDDDYEAIGEQLEADYEALPRGFTMDAQGRVTFIDIPFSPTTPRAQGANRRDGVFRIGDFFESITGYRTAPAQTAPHE
WLMLAESTLAAATNGEVFADPTGQFSKTRQGFKDMPDDVRLALISKRLGMIAQAGQYNLPRSLKRGDSAAAWLSIHEFVQ
ATASLVFLVNVPMVVGYMPYYKWQFAALRKLSGSMFALLPNVGEQLETVMRLSSAACYGGAGFGEGGKGAATAIKKINDI
VEQIAADIVKELKREHLTTSGETFLEWQRPYVEDHIASDDPVLKSL

Sequences:

>Translated_686_residues
MADDAMDARLEQALLGMQAKHAHDFDAPENGPAAQGGNELHDFDVNEFLHGLDAIFDAHNAAEKAGPYLEQAAVDAENAG
DEAGLLTVLNETMGFYRSQGRHKENQWIVQRALELALHMGLEGTESWATTLINCATAMRAAKRYDQAEDLYHQALDCANK
NFAPNDRRLAALHNNLSMLYSETNRLPQAEIELRQALHIVEAASVNPDADIDVASSNTNLALVLLQESKLKEAHIHATKA
LTIYETGKLTHSAHYASALAGCAQVLYVEHRYGEAASHYRSALAVIAECYGKDTDYYRVTEANLREAEAQIGNDDVHAAN
SADATSTETNTNTDATAEIAVSGLKLARAFWTQVGKPMITAQYPQYVGRIAAGLVGHGSECYGFDDAYSQDHDFGPRFCL
WLTDDDYEAIGEQLEADYEALPRGFTMDAQGRVTFIDIPFSPTTPRAQGANRRDGVFRIGDFFESITGYRTAPAQTAPHE
WLMLAESTLAAATNGEVFADPTGQFSKTRQGFKDMPDDVRLALISKRLGMIAQAGQYNLPRSLKRGDSAAAWLSIHEFVQ
ATASLVFLVNVPMVVGYMPYYKWQFAALRKLSGSMFALLPNVGEQLETVMRLSSAACYGGAGFGEGGKGAATAIKKINDI
VEQIAADIVKELKREHLTTSGETFLEWQRPYVEDHIASDDPVLKSL
>Mature_685_residues
ADDAMDARLEQALLGMQAKHAHDFDAPENGPAAQGGNELHDFDVNEFLHGLDAIFDAHNAAEKAGPYLEQAAVDAENAGD
EAGLLTVLNETMGFYRSQGRHKENQWIVQRALELALHMGLEGTESWATTLINCATAMRAAKRYDQAEDLYHQALDCANKN
FAPNDRRLAALHNNLSMLYSETNRLPQAEIELRQALHIVEAASVNPDADIDVASSNTNLALVLLQESKLKEAHIHATKAL
TIYETGKLTHSAHYASALAGCAQVLYVEHRYGEAASHYRSALAVIAECYGKDTDYYRVTEANLREAEAQIGNDDVHAANS
ADATSTETNTNTDATAEIAVSGLKLARAFWTQVGKPMITAQYPQYVGRIAAGLVGHGSECYGFDDAYSQDHDFGPRFCLW
LTDDDYEAIGEQLEADYEALPRGFTMDAQGRVTFIDIPFSPTTPRAQGANRRDGVFRIGDFFESITGYRTAPAQTAPHEW
LMLAESTLAAATNGEVFADPTGQFSKTRQGFKDMPDDVRLALISKRLGMIAQAGQYNLPRSLKRGDSAAAWLSIHEFVQA
TASLVFLVNVPMVVGYMPYYKWQFAALRKLSGSMFALLPNVGEQLETVMRLSSAACYGGAGFGEGGKGAATAIKKINDIV
EQIAADIVKELKREHLTTSGETFLEWQRPYVEDHIASDDPVLKSL

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 75060; Mature: 74929

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADDAMDARLEQALLGMQAKHAHDFDAPENGPAAQGGNELHDFDVNEFLHGLDAIFDAHN
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
AAEKAGPYLEQAAVDAENAGDEAGLLTVLNETMGFYRSQGRHKENQWIVQRALELALHMG
HHHHHCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC
LEGTESWATTLINCATAMRAAKRYDQAEDLYHQALDCANKNFAPNDRRLAALHNNLSMLY
CCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
SETNRLPQAEIELRQALHIVEAASVNPDADIDVASSNTNLALVLLQESKLKEAHIHATKA
HHHCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCEEEEEEECCCCHHHHHHHHEE
LTIYETGKLTHSAHYASALAGCAQVLYVEHRYGEAASHYRSALAVIAECYGKDTDYYRVT
EEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCEEEEE
EANLREAEAQIGNDDVHAANSADATSTETNTNTDATAEIAVSGLKLARAFWTQVGKPMIT
CCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEE
AQYPQYVGRIAAGLVGHGSECYGFDDAYSQDHDFGPRFCLWLTDDDYEAIGEQLEADYEA
EHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHCCHHH
LPRGFTMDAQGRVTFIDIPFSPTTPRAQGANRRDGVFRIGDFFESITGYRTAPAQTAPHE
CCCCCEECCCCCEEEEEECCCCCCCCCCCCCCCCCEEEHHHHHHHHCCCCCCCCCCCCHH
WLMLAESTLAAATNGEVFADPTGQFSKTRQGFKDMPDDVRLALISKRLGMIAQAGQYNLP
HHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCC
RSLKRGDSAAAWLSIHEFVQATASLVFLVNVPMVVGYMPYYKWQFAALRKLSGSMFALLP
HHHHCCCCHHHHHHHHHHHHHHHHHHHEEHHHHHHHCCCHHHHHHHHHHHHCCCCEEHHH
NVGEQLETVMRLSSAACYGGAGFGEGGKGAATAIKKINDIVEQIAADIVKELKREHLTTS
HHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GETFLEWQRPYVEDHIASDDPVLKSL
CCHHHHHCCCHHHHHCCCCCCHHHCC
>Mature Secondary Structure 
ADDAMDARLEQALLGMQAKHAHDFDAPENGPAAQGGNELHDFDVNEFLHGLDAIFDAHN
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
AAEKAGPYLEQAAVDAENAGDEAGLLTVLNETMGFYRSQGRHKENQWIVQRALELALHMG
HHHHHCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC
LEGTESWATTLINCATAMRAAKRYDQAEDLYHQALDCANKNFAPNDRRLAALHNNLSMLY
CCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
SETNRLPQAEIELRQALHIVEAASVNPDADIDVASSNTNLALVLLQESKLKEAHIHATKA
HHHCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCEEEEEEECCCCHHHHHHHHEE
LTIYETGKLTHSAHYASALAGCAQVLYVEHRYGEAASHYRSALAVIAECYGKDTDYYRVT
EEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCEEEEE
EANLREAEAQIGNDDVHAANSADATSTETNTNTDATAEIAVSGLKLARAFWTQVGKPMIT
CCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEE
AQYPQYVGRIAAGLVGHGSECYGFDDAYSQDHDFGPRFCLWLTDDDYEAIGEQLEADYEA
EHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHCCHHH
LPRGFTMDAQGRVTFIDIPFSPTTPRAQGANRRDGVFRIGDFFESITGYRTAPAQTAPHE
CCCCCEECCCCCEEEEEECCCCCCCCCCCCCCCCCEEEHHHHHHHHCCCCCCCCCCCCHH
WLMLAESTLAAATNGEVFADPTGQFSKTRQGFKDMPDDVRLALISKRLGMIAQAGQYNLP
HHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCC
RSLKRGDSAAAWLSIHEFVQATASLVFLVNVPMVVGYMPYYKWQFAALRKLSGSMFALLP
HHHHCCCCHHHHHHHHHHHHHHHHHHHEEHHHHHHHCCCHHHHHHHHHHHHCCCCEEHHH
NVGEQLETVMRLSSAACYGGAGFGEGGKGAATAIKKINDIVEQIAADIVKELKREHLTTS
HHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GETFLEWQRPYVEDHIASDDPVLKSL
CCHHHHHCCCHHHHHCCCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA