| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is dhfrIII [H]
Identifier: 213692994
GI number: 213692994
Start: 2367056
End: 2367610
Strand: Reverse
Name: dhfrIII [H]
Synonym: Blon_2141
Alternate gene names: 213692994
Gene position: 2367610-2367056 (Counterclockwise)
Preceding gene: 213692995
Following gene: 213692993
Centisome position: 83.58
GC content: 61.44
Gene sequence:
>555_bases GTGAATCTTATCTGGGCCGAAGCCCGCGACAAGGAAGGTCGCGCCGGTGCCATCGGCCTCAATGGCGGCATGCCTTGGCA CTGTGCCGAGGATATGAAGCATTTCAAGGAGCTGACCGTCTCCCATCCGGTGATTATGGGTCGTAAGACTTGGGAATCGC TGGGGGTCAAGTACCGGCCGCTGCCCAACCGCGACAACATCGTCGTTTCCCACGATCCGATGTACCGTGCGCCGGGGGCC ACTGTGGTCACCAGTCTTGACGACGCGCTCGATATGGCCCGTCAGGAGGCGATTCCGGACGACGGTCTGGACCGTTCGGA GATTTGGATCATCGGCGGTGCCCAGCTGTTCGCCGAGGCTTTGCCGTTCGCGGACAAAGCCTATGTGACTGATCTGGCCG CCACCGTGGATGCCGACAGCTACGCGCCCGATATGGCGTCGCTGGTCGAGGCCGGGATGTGGCGGGAAGCCGAAGTGGGC GAGTGGCATACGCCCGCCAAGGAGGAGTCCGGCATCGATTCCTATCGTTTCCGTATCTTGGCTAAAACCAAGTGA
Upstream 100 bases:
>100_bases TGACAGTAGCCGTAGCGGCTATCACGAACCCGAGCCCGGATCTGCCGGGCTGTCTGCCACTGAAGAAGACTGGGGTGACG ATTATCCCAAGACCTTCTCG
Downstream 100 bases:
>100_bases GCATGCGAATCCGGCTTATGCCCTTTATAGCGGCATGAGCCGGATTCATATTCATTCGACCCCAACAATACAGTCGGGCC GTGTGCGGCCCGTTGAAGTC
Product: Dihydrofolate reductase
Products: NA
Alternate protein names: Dihydrofolate reductase type III [H]
Number of amino acids: Translated: 184; Mature: 184
Protein sequence:
>184_residues MNLIWAEARDKEGRAGAIGLNGGMPWHCAEDMKHFKELTVSHPVIMGRKTWESLGVKYRPLPNRDNIVVSHDPMYRAPGA TVVTSLDDALDMARQEAIPDDGLDRSEIWIIGGAQLFAEALPFADKAYVTDLAATVDADSYAPDMASLVEAGMWREAEVG EWHTPAKEESGIDSYRFRILAKTK
Sequences:
>Translated_184_residues MNLIWAEARDKEGRAGAIGLNGGMPWHCAEDMKHFKELTVSHPVIMGRKTWESLGVKYRPLPNRDNIVVSHDPMYRAPGA TVVTSLDDALDMARQEAIPDDGLDRSEIWIIGGAQLFAEALPFADKAYVTDLAATVDADSYAPDMASLVEAGMWREAEVG EWHTPAKEESGIDSYRFRILAKTK >Mature_184_residues MNLIWAEARDKEGRAGAIGLNGGMPWHCAEDMKHFKELTVSHPVIMGRKTWESLGVKYRPLPNRDNIVVSHDPMYRAPGA TVVTSLDDALDMARQEAIPDDGLDRSEIWIIGGAQLFAEALPFADKAYVTDLAATVDADSYAPDMASLVEAGMWREAEVG EWHTPAKEESGIDSYRFRILAKTK
Specific function: Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis [H]
COG id: COG0262
COG function: function code H; Dihydrofolate reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 DHFR (dihydrofolate reductase) domain [H]
Homologues:
Organism=Homo sapiens, GI4503323, Length=181, Percent_Identity=30.3867403314917, Blast_Score=74, Evalue=7e-14, Organism=Escherichia coli, GI1786233, Length=182, Percent_Identity=36.8131868131868, Blast_Score=92, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17505899, Length=182, Percent_Identity=32.967032967033, Blast_Score=79, Evalue=1e-15, Organism=Saccharomyces cerevisiae, GI6324810, Length=169, Percent_Identity=29.585798816568, Blast_Score=77, Evalue=2e-15, Organism=Drosophila melanogaster, GI116008026, Length=178, Percent_Identity=28.6516853932584, Blast_Score=71, Evalue=4e-13, Organism=Drosophila melanogaster, GI24647458, Length=178, Percent_Identity=28.6516853932584, Blast_Score=71, Evalue=4e-13,
Paralogues:
None
Copy number: 640 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 10,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012259 - InterPro: IPR017925 - InterPro: IPR001796 [H]
Pfam domain/function: PF00186 DHFR_1 [H]
EC number: =1.5.1.3 [H]
Molecular weight: Translated: 20373; Mature: 20373
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: PS00075 DHFR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLIWAEARDKEGRAGAIGLNGGMPWHCAEDMKHFKELTVSHPVIMGRKTWESLGVKYRP CCEEECCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEECCCCHHHCCEEECC LPNRDNIVVSHDPMYRAPGATVVTSLDDALDMARQEAIPDDGLDRSEIWIIGGAQLFAEA CCCCCCEEEECCCCCCCCCCEEEHHHHHHHHHHHHHCCCCCCCCCCEEEEEECHHHHHHH LPFADKAYVTDLAATVDADSYAPDMASLVEAGMWREAEVGEWHTPAKEESGIDSYRFRIL CCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEE AKTK EECC >Mature Secondary Structure MNLIWAEARDKEGRAGAIGLNGGMPWHCAEDMKHFKELTVSHPVIMGRKTWESLGVKYRP CCEEECCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEECCCCHHHCCEEECC LPNRDNIVVSHDPMYRAPGATVVTSLDDALDMARQEAIPDDGLDRSEIWIIGGAQLFAEA CCCCCCEEEECCCCCCCCCCEEEHHHHHHHHHHHHHCCCCCCCCCCEEEEEECHHHHHHH LPFADKAYVTDLAATVDADSYAPDMASLVEAGMWREAEVGEWHTPAKEESGIDSYRFRIL CCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEE AKTK EECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2840679; 6371010 [H]