Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

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The map label for this gene is epsK [H]

Identifier: 213692953

GI number: 213692953

Start: 2319093

End: 2320628

Strand: Reverse

Name: epsK [H]

Synonym: Blon_2099

Alternate gene names: 213692953

Gene position: 2320628-2319093 (Counterclockwise)

Preceding gene: 213692954

Following gene: 213692952

Centisome position: 81.92

GC content: 51.56

Gene sequence:

>1536_bases
ATGGGAGATAAGAAACAACTGCTTGTGAACATGGTCGCAAGTTTGGTGAATTTCACGGTTTCCGTTGGAATCGGTCTGGT
GCTTACGCCATATATCGTGCGTAGCATCGGCGCTGAAGCCTATGGGTTCGTCGGATTGGCGAACACGTTCGTGAGCTATG
CGCAGCTGCTTACCATCGCATTGAATTCGGTGGCCGGGCGCTTCATCACGGTCGCATACCATGAAGGCGATGATTCCAAG
GCGAACGGGTATTATTCGTCTACGCTTGCGGCAAACGGCGTCATGGTCGCCATACTGGTGGTCGTCGCGGTTCCGGTGGT
GACGTTCCTTGACAAGCTGGTGAACATCTCTCCACATCTTGTGGGAGACGTGAAGGCTCTGTTCGTCTTCATATTCCTGA
ATTTCATGCTTTCGACCATCGCCACGGTGTATTCCGTCGCCACATTCGTGAAGAACAAGCTGTATCTGAGCAGTATCGCG
AATCTCGCGTTTTCCTTGGTACGTGTGGTGGCCATGGTCGCGCTTTTCGGGATTCTGCCGCCAAAGGTCTACTACGTGGG
CTTGGCCGTATGCTTGGCGACGGCGGTGATGACGCTGATGAATCGCTCGTATACGCGCAGATTACTTCCCGACATTTCCT
TCGACAGGAAATCGGTATCGTGGACGAGCATTCGTGAGATGCTTTCCGCCGGCGTGTGGAACGTGGTCACGAAACTCCAG
CAGATTATGATGTTCGGATTGCAGTTGCTGGTGGCGAACCTGATGATCAGCCCGTATCTTATGGGTATGCTCTCCATCGC
CCAGACCGTTCCGAACCAGATCAGCGGACTAATGTGGACTGTGTCGAGCCTGTTTTATCCTGAACAGACGAAATACTATG
CGCAGGGCAAGCATAAGGAACTCATCGAAGACCTCAAATCGGGCATGAAGGTGACCGGTTTCTTCACGAATATTATTTTT
GTGGCGATGCTTGTTGCAGGATATGATTTCATGAGTTTGTGGCAGCATGGTCAGGATACGGAGCTGTTGTATCAGTTGCT
TACCCTTACCATGCTGGGCTTGCTGATTTCCGGTGTCGCTACGACGTTGCAGAATCTGCCGCTGATCGTCAACCGTTTGA
AGAAGTATTCTATCGGATGGCTCGTCTACAGTGCGATATCCATGGTCGTGCTGATTGCCTTTATCGAGGTTCTTCCGAAG
TGGGGCGTTTTCCTCGTGGCGGCGATTCCGCCTCTGTTTGAGATTTTGGCAAATGTGACATTCGTGCCCGTTTATGCCTC
CAGATGCTTGGGCATCGGGAAATTCGAGTTCTATCCCATCTATATTCGGTACTTCGCCTCCACAGCGGTGGCTGCCGCCG
TCTGCTGGGGAATCAGGCATGTGTTCGCGCTGGTCGCCAATGGCTGGGTCTCGTTGATTCTGACGTGTTGCCTGTATGCA
TTGGTCACAATGCTTTTGGATGTAGTGTTGTTGCTCGGAAAGAAAGAACGTTCCATGTTGGTAGGTATGCTGAAGAAGAA
GCTACATATCAACTAG

Upstream 100 bases:

>100_bases
AATCGATGTCGCAGGCGGCGTTGCTGCATTCGCGGAAATTTACGGAAGAATCCTTTTATCGGGAATTCGTGGAGAAGATA
GGCGAGTAATAGGCTGAATT

Downstream 100 bases:

>100_bases
CGAGGTGGTGGCGTTTTCTTGGACTCTCCGACCGGGAGGAGACCCCCTAGGGTGGTATACAGCAAGGAACAACGCGACCG
CGTCCACAGCTCTGCGTTTC

Product: polysaccharide biosynthesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 511; Mature: 510

Protein sequence:

>511_residues
MGDKKQLLVNMVASLVNFTVSVGIGLVLTPYIVRSIGAEAYGFVGLANTFVSYAQLLTIALNSVAGRFITVAYHEGDDSK
ANGYYSSTLAANGVMVAILVVVAVPVVTFLDKLVNISPHLVGDVKALFVFIFLNFMLSTIATVYSVATFVKNKLYLSSIA
NLAFSLVRVVAMVALFGILPPKVYYVGLAVCLATAVMTLMNRSYTRRLLPDISFDRKSVSWTSIREMLSAGVWNVVTKLQ
QIMMFGLQLLVANLMISPYLMGMLSIAQTVPNQISGLMWTVSSLFYPEQTKYYAQGKHKELIEDLKSGMKVTGFFTNIIF
VAMLVAGYDFMSLWQHGQDTELLYQLLTLTMLGLLISGVATTLQNLPLIVNRLKKYSIGWLVYSAISMVVLIAFIEVLPK
WGVFLVAAIPPLFEILANVTFVPVYASRCLGIGKFEFYPIYIRYFASTAVAAAVCWGIRHVFALVANGWVSLILTCCLYA
LVTMLLDVVLLLGKKERSMLVGMLKKKLHIN

Sequences:

>Translated_511_residues
MGDKKQLLVNMVASLVNFTVSVGIGLVLTPYIVRSIGAEAYGFVGLANTFVSYAQLLTIALNSVAGRFITVAYHEGDDSK
ANGYYSSTLAANGVMVAILVVVAVPVVTFLDKLVNISPHLVGDVKALFVFIFLNFMLSTIATVYSVATFVKNKLYLSSIA
NLAFSLVRVVAMVALFGILPPKVYYVGLAVCLATAVMTLMNRSYTRRLLPDISFDRKSVSWTSIREMLSAGVWNVVTKLQ
QIMMFGLQLLVANLMISPYLMGMLSIAQTVPNQISGLMWTVSSLFYPEQTKYYAQGKHKELIEDLKSGMKVTGFFTNIIF
VAMLVAGYDFMSLWQHGQDTELLYQLLTLTMLGLLISGVATTLQNLPLIVNRLKKYSIGWLVYSAISMVVLIAFIEVLPK
WGVFLVAAIPPLFEILANVTFVPVYASRCLGIGKFEFYPIYIRYFASTAVAAAVCWGIRHVFALVANGWVSLILTCCLYA
LVTMLLDVVLLLGKKERSMLVGMLKKKLHIN
>Mature_510_residues
GDKKQLLVNMVASLVNFTVSVGIGLVLTPYIVRSIGAEAYGFVGLANTFVSYAQLLTIALNSVAGRFITVAYHEGDDSKA
NGYYSSTLAANGVMVAILVVVAVPVVTFLDKLVNISPHLVGDVKALFVFIFLNFMLSTIATVYSVATFVKNKLYLSSIAN
LAFSLVRVVAMVALFGILPPKVYYVGLAVCLATAVMTLMNRSYTRRLLPDISFDRKSVSWTSIREMLSAGVWNVVTKLQQ
IMMFGLQLLVANLMISPYLMGMLSIAQTVPNQISGLMWTVSSLFYPEQTKYYAQGKHKELIEDLKSGMKVTGFFTNIIFV
AMLVAGYDFMSLWQHGQDTELLYQLLTLTMLGLLISGVATTLQNLPLIVNRLKKYSIGWLVYSAISMVVLIAFIEVLPKW
GVFLVAAIPPLFEILANVTFVPVYASRCLGIGKFEFYPIYIRYFASTAVAAAVCWGIRHVFALVANGWVSLILTCCLYAL
VTMLLDVVLLLGKKERSMLVGMLKKKLHIN

Specific function: May be involved in the production of the exopolysaccharide (EPS) component of the extracellular matrix during biofilm formation. EPS is responsible for the adhesion of chains of cells into bundles [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002797 [H]

Pfam domain/function: PF01943 Polysacc_synt [H]

EC number: NA

Molecular weight: Translated: 56319; Mature: 56188

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GDKKQLLVNMVASLVNFTVSVGIGLVLTPYIVRSIGAEAYGFVGLANTFVSYAQLLTIA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH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HHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969506; 9384377 [H]