| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692939
Identifier: 213692939
GI number: 213692939
Start: 2301280
End: 2302671
Strand: Direct
Name: 213692939
Synonym: Blon_2083
Alternate gene names: NA
Gene position: 2301280-2302671 (Clockwise)
Preceding gene: 213692936
Following gene: 213692940
Centisome position: 81.24
GC content: 48.99
Gene sequence:
>1392_bases ATGTCCACACCGAACAATACGCAGCTCAGCAACAAGTCAGTTCAAGAAAAACGCAGAAACTCCGGTCATTGCCCCGCGCT ACAGCGTGGGGCAATGACCGAGACGCTGACTCGTATCACCATCACCCCATCAGACATGTTGGTGTTTGCCGCAGTGGCCA TGCTGCCATTTGATGGCACAAAAATTGGCATTCCACTCCCCTATTGGACGCCAATCTCCCCCTGGTTGTTCACCCTGTAC ACAATCATCAACTGGCGATACTTGCGCGATACCGCACGCCGCTTCCTGCCGTTCTTCCTCTTTCCCCTGCTACTAGTGCT CACATCCGTATACGGCTGGCAGTCATATGGAATACACGCCAGCGCAACCGCAAAGTCATTCATCTCCATATTGTTAGGGC TGGCGTGCTTGGCTTCGCTCGACATCGCGATCCGCATTAAACGTGTACCTGTACGAACATTGTTAACTACGCTATTCACC GCATATGTAGTGGCATTCCTCATTGGGATACTGCAATATATCGCTTTGGAACGACATCTGAACTGGCAGCCAGTACGAGC ATATTTTTGGGGTGCTCTGTATAGAAACTATGCGAGCGTTCGTCCTCAATTCATGTTCGCAGAACCTAGCTATATCGGCA TGCATTTGTTCGGCGTACTCCTGCCAGTTTTCTGGCTGACCCGCGACCGCAAGATTGGCATATTGATACCGATATTTGCC GCTGGAGCAATTGCGATGGGCTCCGGCACCCGAATCATACTGGATACAGTGGTAGCTACATTTATCTGGCTGATAGCGAC AATCAACTTCCACTCACGTAAGGCAACAGCTGGGTTCGTCGGTGCTTTAGGACTTCTTGGAGCAGGTGGGTTGAGCGCAA TTATCATCAATCCGCGTCTAAACTCTTTAGTCACCAATGGATTACTTGCTGGTGACGGATCGATGAGTGCAAGAATCTTC CATATGCTCGCTCCCATGTGGTCATGGAAACATGATCTACCTCACTTCATGTTTGGATGGGGCGCAGGCAATATCTCTAA TGCAGTGCGTACTGGTTACGCCGGTGCCCGCCAATGGTATGACGCCCATGGCGGTGCGCCCAATACCGAAATCGACGGTT TAGCAAATCCCCCAGCGGATACTTTCACAATGAGCATCTATGCCAGCTTCATTACCGAATTTGGTCTATTTTGCTTTTTG ACCTTCTTGCTCTTGGTATTAGCACATGTAGCGGTCCATCATGGATGGAGCCGACGGAACATATGCTGGTTCATTCTTCT CGCATACCTATATATTCAGTTTGAATCATACGCATTCTATGCAATTCCACTGTTCATATGGGCTGTCTGCACAATAATGA ATCGAGGAAAAAACAACATCAATTCTCTTTAG
Upstream 100 bases:
>100_bases AAAGTACTTCATGAAAGTGAACGGTTGACCGAACCCCCATCACCTCACCCACACATGCAACTGGTACAGTTCTCACGGAG GATATGGGAGGGAACCAAGT
Downstream 100 bases:
>100_bases AATGCGAGAATCGCAATTCGCTACTCTCTATCATGCCGATAAAGAGTGCGCATACGGAATGATCGGTCAGGCGTTTTAGG ATACAGATGCGGACGGTATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 463; Mature: 462
Protein sequence:
>463_residues MSTPNNTQLSNKSVQEKRRNSGHCPALQRGAMTETLTRITITPSDMLVFAAVAMLPFDGTKIGIPLPYWTPISPWLFTLY TIINWRYLRDTARRFLPFFLFPLLLVLTSVYGWQSYGIHASATAKSFISILLGLACLASLDIAIRIKRVPVRTLLTTLFT AYVVAFLIGILQYIALERHLNWQPVRAYFWGALYRNYASVRPQFMFAEPSYIGMHLFGVLLPVFWLTRDRKIGILIPIFA AGAIAMGSGTRIILDTVVATFIWLIATINFHSRKATAGFVGALGLLGAGGLSAIIINPRLNSLVTNGLLAGDGSMSARIF HMLAPMWSWKHDLPHFMFGWGAGNISNAVRTGYAGARQWYDAHGGAPNTEIDGLANPPADTFTMSIYASFITEFGLFCFL TFLLLVLAHVAVHHGWSRRNICWFILLAYLYIQFESYAFYAIPLFIWAVCTIMNRGKNNINSL
Sequences:
>Translated_463_residues MSTPNNTQLSNKSVQEKRRNSGHCPALQRGAMTETLTRITITPSDMLVFAAVAMLPFDGTKIGIPLPYWTPISPWLFTLY TIINWRYLRDTARRFLPFFLFPLLLVLTSVYGWQSYGIHASATAKSFISILLGLACLASLDIAIRIKRVPVRTLLTTLFT AYVVAFLIGILQYIALERHLNWQPVRAYFWGALYRNYASVRPQFMFAEPSYIGMHLFGVLLPVFWLTRDRKIGILIPIFA AGAIAMGSGTRIILDTVVATFIWLIATINFHSRKATAGFVGALGLLGAGGLSAIIINPRLNSLVTNGLLAGDGSMSARIF HMLAPMWSWKHDLPHFMFGWGAGNISNAVRTGYAGARQWYDAHGGAPNTEIDGLANPPADTFTMSIYASFITEFGLFCFL TFLLLVLAHVAVHHGWSRRNICWFILLAYLYIQFESYAFYAIPLFIWAVCTIMNRGKNNINSL >Mature_462_residues STPNNTQLSNKSVQEKRRNSGHCPALQRGAMTETLTRITITPSDMLVFAAVAMLPFDGTKIGIPLPYWTPISPWLFTLYT IINWRYLRDTARRFLPFFLFPLLLVLTSVYGWQSYGIHASATAKSFISILLGLACLASLDIAIRIKRVPVRTLLTTLFTA YVVAFLIGILQYIALERHLNWQPVRAYFWGALYRNYASVRPQFMFAEPSYIGMHLFGVLLPVFWLTRDRKIGILIPIFAA GAIAMGSGTRIILDTVVATFIWLIATINFHSRKATAGFVGALGLLGAGGLSAIIINPRLNSLVTNGLLAGDGSMSARIFH MLAPMWSWKHDLPHFMFGWGAGNISNAVRTGYAGARQWYDAHGGAPNTEIDGLANPPADTFTMSIYASFITEFGLFCFLT FLLLVLAHVAVHHGWSRRNICWFILLAYLYIQFESYAFYAIPLFIWAVCTIMNRGKNNINSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51757; Mature: 51626
Theoretical pI: Translated: 10.14; Mature: 10.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTPNNTQLSNKSVQEKRRNSGHCPALQRGAMTETLTRITITPSDMLVFAAVAMLPFDGT CCCCCCCCCCCHHHHHHHCCCCCCCHHHHCCHHHHHEEEEECCHHHHHHHHHHHCCCCCC KIGIPLPYWTPISPWLFTLYTIINWRYLRDTARRFLPFFLFPLLLVLTSVYGWQSYGIHA EECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCC SATAKSFISILLGLACLASLDIAIRIKRVPVRTLLTTLFTAYVVAFLIGILQYIALERHL HHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NWQPVRAYFWGALYRNYASVRPQFMFAEPSYIGMHLFGVLLPVFWLTRDRKIGILIPIFA CCCHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEHHH AGAIAMGSGTRIILDTVVATFIWLIATINFHSRKATAGFVGALGLLGAGGLSAIIINPRL CCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCH NSLVTNGLLAGDGSMSARIFHMLAPMWSWKHDLPHFMFGWGAGNISNAVRTGYAGARQWY HHHHHCCEEECCCCHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHCCHHHHHHH DAHGGAPNTEIDGLANPPADTFTMSIYASFITEFGLFCFLTFLLLVLAHVAVHHGWSRRN HCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC ICWFILLAYLYIQFESYAFYAIPLFIWAVCTIMNRGKNNINSL HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure STPNNTQLSNKSVQEKRRNSGHCPALQRGAMTETLTRITITPSDMLVFAAVAMLPFDGT CCCCCCCCCCHHHHHHHCCCCCCCHHHHCCHHHHHEEEEECCHHHHHHHHHHHCCCCCC KIGIPLPYWTPISPWLFTLYTIINWRYLRDTARRFLPFFLFPLLLVLTSVYGWQSYGIHA EECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCC SATAKSFISILLGLACLASLDIAIRIKRVPVRTLLTTLFTAYVVAFLIGILQYIALERHL HHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NWQPVRAYFWGALYRNYASVRPQFMFAEPSYIGMHLFGVLLPVFWLTRDRKIGILIPIFA CCCHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEHHH AGAIAMGSGTRIILDTVVATFIWLIATINFHSRKATAGFVGALGLLGAGGLSAIIINPRL CCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCH NSLVTNGLLAGDGSMSARIFHMLAPMWSWKHDLPHFMFGWGAGNISNAVRTGYAGARQWY HHHHHCCEEECCCCHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHCCHHHHHHH DAHGGAPNTEIDGLANPPADTFTMSIYASFITEFGLFCFLTFLLLVLAHVAVHHGWSRRN HCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC ICWFILLAYLYIQFESYAFYAIPLFIWAVCTIMNRGKNNINSL HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA