| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692934
Identifier: 213692934
GI number: 213692934
Start: 2294583
End: 2295566
Strand: Direct
Name: 213692934
Synonym: Blon_2078
Alternate gene names: NA
Gene position: 2294583-2295566 (Clockwise)
Preceding gene: 213692933
Following gene: 213692935
Centisome position: 81.0
GC content: 59.96
Gene sequence:
>984_bases ATGTCGAAGCACGCTGAGCGAACCTCAATCGTCAAGACCCTATCTCGGGGTCAGTGGGCGAAGATCGCAGCGGCCGTAGC CGCAGTGGGTCTCATTGCCACTGCAGGCGTTATATCTCGCGACTTCTATCAGTCGAGCACCGCTACGCATCCCATCACCC CAACCTCATTCTCCGCCACCGACGGCGCAGCTTCCCGCTCGGCCTCCCGTGGTGCGCTCAAGAGCACCACCTACGTGACC GTCAAGGTCAACGGCAAGTCCCGCGTGGTCCTCGGCGAAAAAGACAACATGACCACCGTCAAGGATGTGCTGGAAACCGG CGATATCGTTCTCGATCCGGAAGATAGCGTGAGCCCAAGCCTGGATTCCAAGGTCACCGAGTCCACGGTCATTTCCATCG ACCGCGCCAACACCACGGTGGAGACCACTGACACCGATATCGCTTTCAATGAAGTACGCAAGGAGACCTCGAGCCTGCCC AATGGCCAGGAGAAGGTCGAGACCGAGGGTGAGAAGGGTGTGCTGGAGACCACGTCTCTGGTGACCCGCTCCGGCGATAA GGTCGTCTCCTCCAACGTGTTCACCTCATGGGTCAAGAAGGCACCGGTCGACAAGGTGATTCTGGTGGGTACCGCCACCG TGTCTTCGCCCAGCGCCGCCAGCATCGGCACTACCACGCCGGCCGGCGAGATTCAGTCCTGGGCGCATGACTACCTGATT TCCAACGGCTACTCCGAGGCCGACTTCACCGCCGCCAACTTCATCATCAGCCACGAATCCGGCTGGAGCCCCACCGCCAC GAACCCGTCTTCAGGTGCTTATGGCCTGCCGCAGGCGCTGCCGGGCAGCAAGATGGCTTCCGCAGGTGCAGACTGGCAGA CCAACTACCAGACCCAGTTCAAGTGGTTTGTGAATTATTGCAAAGACCGCTATGGTTCGATTTCCGGCGCGTACGCGTAT TGGCAGGCGCACAAGAGCTACTAA
Upstream 100 bases:
>100_bases ATATGCCATCCGTGGCGGGTCGAACACCCACCACGGATTTTTTATTCATCCACTCAACGTCCTATGATGGAGAGCAGTGT GTACCCAACCAAGGAGCGCA
Downstream 100 bases:
>100_bases GCCAGCCAAATCAACACGCACACAACAGGTTCCGCGCCGCAAGGAGGCTGAGTGAAACCCGGCCCAAACGCCGAGCGAAC TCATGCGCATGATGCCGGTT
Product: G5 domain protein
Products: NA
Alternate protein names: G5 Domain Protein; G5 Domain-Containing Protein; TraG-Related Protein; Membrane-Bound Transglycosylase; Transglycosylase; Transglycosylase Domain Protein; Peptidase S1 And S6 Chymotrypsin/Hap; TraG-Like Protein; Phage Tail Tape Mesure Protein; Phage Tail Tape Measure Protein; Immunogenic Secreted Protein
Number of amino acids: Translated: 327; Mature: 326
Protein sequence:
>327_residues MSKHAERTSIVKTLSRGQWAKIAAAVAAVGLIATAGVISRDFYQSSTATHPITPTSFSATDGAASRSASRGALKSTTYVT VKVNGKSRVVLGEKDNMTTVKDVLETGDIVLDPEDSVSPSLDSKVTESTVISIDRANTTVETTDTDIAFNEVRKETSSLP NGQEKVETEGEKGVLETTSLVTRSGDKVVSSNVFTSWVKKAPVDKVILVGTATVSSPSAASIGTTTPAGEIQSWAHDYLI SNGYSEADFTAANFIISHESGWSPTATNPSSGAYGLPQALPGSKMASAGADWQTNYQTQFKWFVNYCKDRYGSISGAYAY WQAHKSY
Sequences:
>Translated_327_residues MSKHAERTSIVKTLSRGQWAKIAAAVAAVGLIATAGVISRDFYQSSTATHPITPTSFSATDGAASRSASRGALKSTTYVT VKVNGKSRVVLGEKDNMTTVKDVLETGDIVLDPEDSVSPSLDSKVTESTVISIDRANTTVETTDTDIAFNEVRKETSSLP NGQEKVETEGEKGVLETTSLVTRSGDKVVSSNVFTSWVKKAPVDKVILVGTATVSSPSAASIGTTTPAGEIQSWAHDYLI SNGYSEADFTAANFIISHESGWSPTATNPSSGAYGLPQALPGSKMASAGADWQTNYQTQFKWFVNYCKDRYGSISGAYAY WQAHKSY >Mature_326_residues SKHAERTSIVKTLSRGQWAKIAAAVAAVGLIATAGVISRDFYQSSTATHPITPTSFSATDGAASRSASRGALKSTTYVTV KVNGKSRVVLGEKDNMTTVKDVLETGDIVLDPEDSVSPSLDSKVTESTVISIDRANTTVETTDTDIAFNEVRKETSSLPN GQEKVETEGEKGVLETTSLVTRSGDKVVSSNVFTSWVKKAPVDKVILVGTATVSSPSAASIGTTTPAGEIQSWAHDYLIS NGYSEADFTAANFIISHESGWSPTATNPSSGAYGLPQALPGSKMASAGADWQTNYQTQFKWFVNYCKDRYGSISGAYAYW QAHKSY
Specific function: Unknown
COG id: COG3583
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34753; Mature: 34621
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: PS51109 G5
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKHAERTSIVKTLSRGQWAKIAAAVAAVGLIATAGVISRDFYQSSTATHPITPTSFSAT CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC DGAASRSASRGALKSTTYVTVKVNGKSRVVLGEKDNMTTVKDVLETGDIVLDPEDSVSPS CCCHHCCCCCCCCCCEEEEEEEECCCEEEEEECCCCCHHHHHHHHCCCEEECCCCCCCCC LDSKVTESTVISIDRANTTVETTDTDIAFNEVRKETSSLPNGQEKVETEGEKGVLETTSL CCCHHCCCEEEEEECCCCEEECCCCCHHHHHHHHHHHCCCCCHHHHHCCCCCCEEHHHHH VTRSGDKVVSSNVFTSWVKKAPVDKVILVGTATVSSPSAASIGTTTPAGEIQSWAHDYLI HHCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHH SNGYSEADFTAANFIISHESGWSPTATNPSSGAYGLPQALPGSKMASAGADWQTNYQTQF HCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHH KWFVNYCKDRYGSISGAYAYWQAHKSY HHHHHHHHHHHCCCCCHHHEEEECCCC >Mature Secondary Structure SKHAERTSIVKTLSRGQWAKIAAAVAAVGLIATAGVISRDFYQSSTATHPITPTSFSAT CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC DGAASRSASRGALKSTTYVTVKVNGKSRVVLGEKDNMTTVKDVLETGDIVLDPEDSVSPS CCCHHCCCCCCCCCCEEEEEEEECCCEEEEEECCCCCHHHHHHHHCCCEEECCCCCCCCC LDSKVTESTVISIDRANTTVETTDTDIAFNEVRKETSSLPNGQEKVETEGEKGVLETTSL CCCHHCCCEEEEEECCCCEEECCCCCHHHHHHHHHHHCCCCCHHHHHCCCCCCEEHHHHH VTRSGDKVVSSNVFTSWVKKAPVDKVILVGTATVSSPSAASIGTTTPAGEIQSWAHDYLI HHCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHH SNGYSEADFTAANFIISHESGWSPTATNPSSGAYGLPQALPGSKMASAGADWQTNYQTQF HCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHH KWFVNYCKDRYGSISGAYAYWQAHKSY HHHHHHHHHHHCCCCCHHHEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA