Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

Click here to switch to the map view.

The map label for this gene is 213692895

Identifier: 213692895

GI number: 213692895

Start: 2228759

End: 2230078

Strand: Reverse

Name: 213692895

Synonym: Blon_2036

Alternate gene names: NA

Gene position: 2230078-2228759 (Counterclockwise)

Preceding gene: 213692896

Following gene: 213692894

Centisome position: 78.72

GC content: 62.27

Gene sequence:

>1320_bases
GTGTCCACGACTCGCGCGGTTTCGAAGTCGTCCGCTGCCCACTCGCCCTACCAGCGCCTGTTCATGCTGCCCGGAGCCAA
GGCGTTCTGCCTGTCCGGCGCGGTGGCACGATTGCCGATCTCCATGATGAGTCTCGGCATCGTTCTGGCGCTCAACCATC
TCTACGACAATTGGACCATCGCCGGCACCATGAGCGCCGCCTACGTGCTGGCCATGAGCTGCGTCACCCCGTTCTACGCC
CGCGCCTTCGACCGTTTCGGCCAAGCCCGCGTGGGCCGGCTTGCGCTCGCCGTGCAGATCGTGGCCATGCTCGCCTTCGC
CTTCGCGGCGTTGGTGCGCGTGCCGATTCCGCTGCTGTTCGCCCTGGCCATCATCATGGGTCTGACGCAGTTCTCATTCG
GTGCATTGGTCCGAACCCGCTGGTCCTATGCGTTGCGCGGTGTGGAAGATGGCGAACAGCTGCTCAACACGGCCTACGCC
ATGGAAGCCGCCATTGACGAGATCGTCTTTATTCTAGGGCCGATTCTGGCGGCTTGGCTGGCCACCTCCGTGCATCCGGT
ATCCCAACTGTTCGTGCCCACCGTGGCATGCGGCATCGGCGGCACCATATTCTTCTCGCTGAAATCCACCCAGCCGCCGG
TCATCGTGGAACAGGTCACCGTGGCCGCTCACGATGACGGCAGCCCCGCTGCAAGCGAAGATGCCGACCAGCTGACCCTG
CGCCAGCTCAAACGCAGCGGTGCCAAGCCCAAAAGCGTATTGCTCTATACCGGCGTACTGCCGTTGCTCGCCGTGTTCAT
CGTGTTCAATATGAGCTTCACGTCCTTCGACGTGTCCATCACCGCCACCATGAAATCCATGGGACTTGAGCCCTTCCTCG
GTCTGCAATTGGCGATGTTCGCGGTCGGCTCGTGCATCGGCGCGCTGGTGTTCGGCTCTCGCCAACTCAAAGGCTCCCAT
TGGGCGCATATGGTGATGTTCCTGTCGCTGTTGACCGTCGGCTACGTGTTCTTCCGGCTGTCAATGGACAATCTCATCCT
GCTGGGCGTCTTCGAAATTCTCTCCGGCCTGACCGTCTCGCCGACGTTCGCCACCGGCAACCTCATCGTCAAGGATCTGG
TGCCGGCGGAATCCCTGACCGAAGGACTGAGCTGGGTAACCACCGCAGGCACGGTCGGCACCTCGATTGGCTCGTCCGTG
GCCGGTATTGTGCTTGACGCCTCCAACCCTCATGTGGGCATGATGCTGCCATTCATCTTCACGCTGGCGTCCGTGCCATT
GGCGTTGGCCGGATGGGCCTTGGCCAAGCGGCGTGGGTGA

Upstream 100 bases:

>100_bases
GGTTGAAACGCACCGCGTGACGTTGCTCGGGAACCGCTACCCTCGGATGGCACGTGTGGGCGGGCGCACGTGCCGGACAA
CGCACCAGTAAGGAGTTATT

Downstream 100 bases:

>100_bases
AACGGGATCGGGCTACGCCCGATGGATGGTTGGCGGCTTCGCCGGGGTCTCTCCCTCAGTCCGCTTCACGGCCAGCTCGA
ACGCAATTAAATGATGGCTT

Product: major facilitator superfamily MFS_1

Products: NA

Alternate protein names: Facilitator Transporter; Transmembrane Efflux Protein; ABC Transporter Permease Protein; ABC Transporter Permease; ABC Transporter; Facilitator Superfamily Transporter Permease; Facilitator Superfamily Permease; Transmembrane Transporter; MFS Family Transmembrane Protein; Arabinose Efflux Permease Family Protein; ABC Transporter Integral Membrane Protein; Integral Membrane Protein; MFS Superfamily Transporter; Permease; Mfs Transporter; Facilitator Superfamily Transporter; LOW QUALITY PROTEIN MFS Superfamily Transporter; Facilitator MFS1 Protein; Transporter-Like Membrane Protein; Efflux Protein; Permease Of Facilitator Superfamily; Transporter Facilitator Family Protein; MFS-Family Transporter; MFS Family Transporter; ABC Transporter Membrane Spanning Protein

Number of amino acids: Translated: 439; Mature: 438

Protein sequence:

>439_residues
MSTTRAVSKSSAAHSPYQRLFMLPGAKAFCLSGAVARLPISMMSLGIVLALNHLYDNWTIAGTMSAAYVLAMSCVTPFYA
RAFDRFGQARVGRLALAVQIVAMLAFAFAALVRVPIPLLFALAIIMGLTQFSFGALVRTRWSYALRGVEDGEQLLNTAYA
MEAAIDEIVFILGPILAAWLATSVHPVSQLFVPTVACGIGGTIFFSLKSTQPPVIVEQVTVAAHDDGSPAASEDADQLTL
RQLKRSGAKPKSVLLYTGVLPLLAVFIVFNMSFTSFDVSITATMKSMGLEPFLGLQLAMFAVGSCIGALVFGSRQLKGSH
WAHMVMFLSLLTVGYVFFRLSMDNLILLGVFEILSGLTVSPTFATGNLIVKDLVPAESLTEGLSWVTTAGTVGTSIGSSV
AGIVLDASNPHVGMMLPFIFTLASVPLALAGWALAKRRG

Sequences:

>Translated_439_residues
MSTTRAVSKSSAAHSPYQRLFMLPGAKAFCLSGAVARLPISMMSLGIVLALNHLYDNWTIAGTMSAAYVLAMSCVTPFYA
RAFDRFGQARVGRLALAVQIVAMLAFAFAALVRVPIPLLFALAIIMGLTQFSFGALVRTRWSYALRGVEDGEQLLNTAYA
MEAAIDEIVFILGPILAAWLATSVHPVSQLFVPTVACGIGGTIFFSLKSTQPPVIVEQVTVAAHDDGSPAASEDADQLTL
RQLKRSGAKPKSVLLYTGVLPLLAVFIVFNMSFTSFDVSITATMKSMGLEPFLGLQLAMFAVGSCIGALVFGSRQLKGSH
WAHMVMFLSLLTVGYVFFRLSMDNLILLGVFEILSGLTVSPTFATGNLIVKDLVPAESLTEGLSWVTTAGTVGTSIGSSV
AGIVLDASNPHVGMMLPFIFTLASVPLALAGWALAKRRG
>Mature_438_residues
STTRAVSKSSAAHSPYQRLFMLPGAKAFCLSGAVARLPISMMSLGIVLALNHLYDNWTIAGTMSAAYVLAMSCVTPFYAR
AFDRFGQARVGRLALAVQIVAMLAFAFAALVRVPIPLLFALAIIMGLTQFSFGALVRTRWSYALRGVEDGEQLLNTAYAM
EAAIDEIVFILGPILAAWLATSVHPVSQLFVPTVACGIGGTIFFSLKSTQPPVIVEQVTVAAHDDGSPAASEDADQLTLR
QLKRSGAKPKSVLLYTGVLPLLAVFIVFNMSFTSFDVSITATMKSMGLEPFLGLQLAMFAVGSCIGALVFGSRQLKGSHW
AHMVMFLSLLTVGYVFFRLSMDNLILLGVFEILSGLTVSPTFATGNLIVKDLVPAESLTEGLSWVTTAGTVGTSIGSSVA
GIVLDASNPHVGMMLPFIFTLASVPLALAGWALAKRRG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46645; Mature: 46513

Theoretical pI: Translated: 9.13; Mature: 9.13

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTTRAVSKSSAAHSPYQRLFMLPGAKAFCLSGAVARLPISMMSLGIVLALNHLYDNWTI
CCCCHHHHHCCCCCCHHHHHHCCCCCHHHHHCCHHHHCCHHHHHHHHHHHHHHHHCCCEE
AGTMSAAYVLAMSCVTPFYARAFDRFGQARVGRLALAVQIVAMLAFAFAALVRVPIPLLF
EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALAIIMGLTQFSFGALVRTRWSYALRGVEDGEQLLNTAYAMEAAIDEIVFILGPILAAWL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATSVHPVSQLFVPTVACGIGGTIFFSLKSTQPPVIVEQVTVAAHDDGSPAASEDADQLTL
HHCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEEEEEEECCCCCCCCCCCHHHHHH
RQLKRSGAKPKSVLLYTGVLPLLAVFIVFNMSFTSFDVSITATMKSMGLEPFLGLQLAMF
HHHHHCCCCCCCEEHHHHHHHHHHHHHHHHCCCCEEEEEEEEHHHHCCCCHHHHHHHHHH
AVGSCIGALVFGSRQLKGSHWAHMVMFLSLLTVGYVFFRLSMDNLILLGVFEILSGLTVS
HHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCC
PTFATGNLIVKDLVPAESLTEGLSWVTTAGTVGTSIGSSVAGIVLDASNPHVGMMLPFIF
CCCCCCCCHHHHCCCHHHHHHHHHHHHCCCHHHHHHCCCCEEEEEECCCCCCHHHHHHHH
TLASVPLALAGWALAKRRG
HHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
STTRAVSKSSAAHSPYQRLFMLPGAKAFCLSGAVARLPISMMSLGIVLALNHLYDNWTI
CCCHHHHHCCCCCCHHHHHHCCCCCHHHHHCCHHHHCCHHHHHHHHHHHHHHHHCCCEE
AGTMSAAYVLAMSCVTPFYARAFDRFGQARVGRLALAVQIVAMLAFAFAALVRVPIPLLF
EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALAIIMGLTQFSFGALVRTRWSYALRGVEDGEQLLNTAYAMEAAIDEIVFILGPILAAWL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATSVHPVSQLFVPTVACGIGGTIFFSLKSTQPPVIVEQVTVAAHDDGSPAASEDADQLTL
HHCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEEEEEEECCCCCCCCCCCHHHHHH
RQLKRSGAKPKSVLLYTGVLPLLAVFIVFNMSFTSFDVSITATMKSMGLEPFLGLQLAMF
HHHHHCCCCCCCEEHHHHHHHHHHHHHHHHCCCCEEEEEEEEHHHHCCCCHHHHHHHHHH
AVGSCIGALVFGSRQLKGSHWAHMVMFLSLLTVGYVFFRLSMDNLILLGVFEILSGLTVS
HHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCC
PTFATGNLIVKDLVPAESLTEGLSWVTTAGTVGTSIGSSVAGIVLDASNPHVGMMLPFIF
CCCCCCCCHHHHCCCHHHHHHHHHHHHCCCHHHHHHCCCCEEEEEECCCCCCHHHHHHHH
TLASVPLALAGWALAKRRG
HHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA