| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692768
Identifier: 213692768
GI number: 213692768
Start: 2077420
End: 2077827
Strand: Direct
Name: 213692768
Synonym: Blon_1903
Alternate gene names: NA
Gene position: 2077420-2077827 (Clockwise)
Preceding gene: 213692759
Following gene: 213692770
Centisome position: 73.34
GC content: 61.52
Gene sequence:
>408_bases GTGGCCGTGCCACGCAATCACGCACTGGCGAGACATGCACTACTCACATTGAAAGACCTCGAAGGCACACGCATCCGCAT CCTCAAACGCCATCGCGGCGCCAACGACACGGCCCGGGACCTGCTGGAACAATATCCGGCCATCGATCTGATCGACATCG ACCATTACGACCTCGACACGTTCAACGACTGCGCCGAATCCGGCGACCTGCTCATCTCCAAACCGATGTGGGCCGGCATT CACCCGCAGCTCGTCAACGTGGCCGTGGACTGGCCCGAACCGGTCGTCATGCACTACGGACTGCTCTACCCGCTCGACGC CACCCCGGTGATTCGCGCGTTCATCTCCCGCATCGCCGCATTATCCTGCCTCGTCAATGGCCCGCCACGTCAAGCCGACA TGATGTGA
Upstream 100 bases:
>100_bases GGAGGCGGAACCAGACGTCGATCTGATATCCACGGCCTTCGACACCGGCTATTGGAACGACACCTGCAACACCCTCGCCC TCGATTCCGAGCCACTATGC
Downstream 100 bases:
>100_bases GACTGTAGCCCAAGCTCATACGAGCCGGCCCGCACGGAGGCGAAATGTTCAGACCGGCTCATTGCCTGTGCACCCATACG TCGATTACGTTATTCCCACT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 135; Mature: 134
Protein sequence:
>135_residues MAVPRNHALARHALLTLKDLEGTRIRILKRHRGANDTARDLLEQYPAIDLIDIDHYDLDTFNDCAESGDLLISKPMWAGI HPQLVNVAVDWPEPVVMHYGLLYPLDATPVIRAFISRIAALSCLVNGPPRQADMM
Sequences:
>Translated_135_residues MAVPRNHALARHALLTLKDLEGTRIRILKRHRGANDTARDLLEQYPAIDLIDIDHYDLDTFNDCAESGDLLISKPMWAGI HPQLVNVAVDWPEPVVMHYGLLYPLDATPVIRAFISRIAALSCLVNGPPRQADMM >Mature_134_residues AVPRNHALARHALLTLKDLEGTRIRILKRHRGANDTARDLLEQYPAIDLIDIDHYDLDTFNDCAESGDLLISKPMWAGIH PQLVNVAVDWPEPVVMHYGLLYPLDATPVIRAFISRIAALSCLVNGPPRQADMM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15132; Mature: 15001
Theoretical pI: Translated: 6.22; Mature: 6.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVPRNHALARHALLTLKDLEGTRIRILKRHRGANDTARDLLEQYPAIDLIDIDHYDLDT CCCCCCHHHHHHHHHHHCCCCCCEEEEEHHHCCCCHHHHHHHHHCCCCEEEECCCCCCCC FNDCAESGDLLISKPMWAGIHPQLVNVAVDWPEPVVMHYGLLYPLDATPVIRAFISRIAA HHHHHCCCCEEEECCCCCCCCCEEEEEEECCCCHHHHHCCCCCCCCCCHHHHHHHHHHHH LSCLVNGPPRQADMM HHHHCCCCCCCCCCC >Mature Secondary Structure AVPRNHALARHALLTLKDLEGTRIRILKRHRGANDTARDLLEQYPAIDLIDIDHYDLDT CCCCCHHHHHHHHHHHCCCCCCEEEEEHHHCCCCHHHHHHHHHCCCCEEEECCCCCCCC FNDCAESGDLLISKPMWAGIHPQLVNVAVDWPEPVVMHYGLLYPLDATPVIRAFISRIAA HHHHHCCCCEEEECCCCCCCCCEEEEEEECCCCHHHHHCCCCCCCCCCHHHHHHHHHHHH LSCLVNGPPRQADMM HHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA