| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is narP [C]
Identifier: 213692722
GI number: 213692722
Start: 2023416
End: 2024117
Strand: Direct
Name: narP [C]
Synonym: Blon_1856
Alternate gene names: 213692722
Gene position: 2023416-2024117 (Clockwise)
Preceding gene: 213692715
Following gene: 213692723
Centisome position: 71.43
GC content: 47.72
Gene sequence:
>702_bases ATGAATAATGAGCCGAGAGAAGAGGACTCTTCCGTGGAATGCTACCATAGCACGGCGGTTGCATCAGCCGCCACCCATAT TGCACTGCTGGATAATGACGCAATTGTGTTAAAAGGATTACAACAGATTATCGAATACAATCACTTAGGAAGCATTACGT GGACCACTCGGAGCGGGAGAGAGGCTGTACAAAGATGCTCAAGTGCCGTAGATACACCGCATTTGCTGCTGTTCGATATG TCTCTTGACGGAATGTCTGGTATAGACGTATGCCGTCAGATTCGCAAAAGAAGCGCATCCGTGCTGCTACTTGGCATCAC GGCTTTCCCCCTAGAACGGTACATTTCTCGGCTGATTCAGGCTGGGGCACAAGGACTAGTTGCAAAAGACGAAGAAAGAC AAATCGCTGAAGTTACGCGTTGGGTATTAAATAAGGGGGGCTGCGGAAATGGGTTCGAAACGGCCCGTAATGCGCATATG CGACTGAAACACGAGACAAATGACATCCGCATGCTGTTATCCGACAGAGAAGAAGAAATCATGATTCTTCTCAGCAAAGG ACTATCCATATCAGAAGCCGCGAATCGCATGCAAATTGGACAGGCTAGTGCAGCAACATATCTTAATAGAGCTCGTCGTA AGCTCAAAGCGGAAACAGTGCGCCAAGCAGTAGCTATCTGGACAGGTGATTATGAACAGTAA
Upstream 100 bases:
>100_bases ATCAAAATATGACCAGCGGCTATCTGTGCCTATCCAACGAATAGGTCGTTGCAACCTATTCATAAAAAGAGACATACCAT AACTATATATTATCGACAAG
Downstream 100 bases:
>100_bases CATCAAAAAACATCCATTCAGATTAATTATAGTGTTACTCTCCTTATTTTTTTCGATAATTGATTGGACAGAGAGACCCA CCACATCTGCGTATGAAATA
Product: two component transcriptional regulator, LuxR family
Products: NA
Alternate protein names: Two Component LuxR Family Transcriptional Regulator; LuxR Family Two Component Transcriptional Regulator; Two-Component System Response Regulator; Two-Component Response Regulator; Response Regulator Of Two-Component System; Response Regulator; Response Regulator Receiver Domain Protein; Luxr Family Two Component System Response Regulator; Response Regulator Receiver Domain-Containing Protein; Transcriptional Regulator UhpA; Transcriptional Regulator LuxR Family; Response Regulatorof Two-Component System; Response Regulator Of Two Component System; LuxR Family Response Regulator; Two Component Transcriptional Regulator Luxr Family; Two-Component System Regulator; Response Regulator Receiver Protein
Number of amino acids: Translated: 233; Mature: 233
Protein sequence:
>233_residues MNNEPREEDSSVECYHSTAVASAATHIALLDNDAIVLKGLQQIIEYNHLGSITWTTRSGREAVQRCSSAVDTPHLLLFDM SLDGMSGIDVCRQIRKRSASVLLLGITAFPLERYISRLIQAGAQGLVAKDEERQIAEVTRWVLNKGGCGNGFETARNAHM RLKHETNDIRMLLSDREEEIMILLSKGLSISEAANRMQIGQASAATYLNRARRKLKAETVRQAVAIWTGDYEQ
Sequences:
>Translated_233_residues MNNEPREEDSSVECYHSTAVASAATHIALLDNDAIVLKGLQQIIEYNHLGSITWTTRSGREAVQRCSSAVDTPHLLLFDM SLDGMSGIDVCRQIRKRSASVLLLGITAFPLERYISRLIQAGAQGLVAKDEERQIAEVTRWVLNKGGCGNGFETARNAHM RLKHETNDIRMLLSDREEEIMILLSKGLSISEAANRMQIGQASAATYLNRARRKLKAETVRQAVAIWTGDYEQ >Mature_233_residues MNNEPREEDSSVECYHSTAVASAATHIALLDNDAIVLKGLQQIIEYNHLGSITWTTRSGREAVQRCSSAVDTPHLLLFDM SLDGMSGIDVCRQIRKRSASVLLLGITAFPLERYISRLIQAGAQGLVAKDEERQIAEVTRWVLNKGGCGNGFETARNAHM RLKHETNDIRMLLSDREEEIMILLSKGLSISEAANRMQIGQASAATYLNRARRKLKAETVRQAVAIWTGDYEQ
Specific function: This Protein Activates The Expression Of The Nitrate Reductase (Narghji) And Formate Dehydrogenase-N (Fdnghi) Operons And Represses The Transcription Of The Fumarate Reductase (Frdabcd) Operon In Response To A Nitrate/Nitrite Induction Signal Transmitted
COG id: COG2197
COG function: function code TK; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25913; Mature: 25913
Theoretical pI: Translated: 7.11; Mature: 7.11
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNEPREEDSSVECYHSTAVASAATHIALLDNDAIVLKGLQQIIEYNHLGSITWTTRSGR CCCCCCCCCCCCHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHCCCCEEEECCCHH EAVQRCSSAVDTPHLLLFDMSLDGMSGIDVCRQIRKRSASVLLLGITAFPLERYISRLIQ HHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHH AGAQGLVAKDEERQIAEVTRWVLNKGGCGNGFETARNAHMRLKHETNDIRMLLSDREEEI HCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHEEEEECCCHHHHHHCCCCHHE MILLSKGLSISEAANRMQIGQASAATYLNRARRKLKAETVRQAVAIWTGDYEQ EEHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MNNEPREEDSSVECYHSTAVASAATHIALLDNDAIVLKGLQQIIEYNHLGSITWTTRSGR CCCCCCCCCCCCHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHCCCCEEEECCCHH EAVQRCSSAVDTPHLLLFDMSLDGMSGIDVCRQIRKRSASVLLLGITAFPLERYISRLIQ HHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHH AGAQGLVAKDEERQIAEVTRWVLNKGGCGNGFETARNAHMRLKHETNDIRMLLSDREEEI HCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHEEEEECCCHHHHHHCCCCHHE MILLSKGLSISEAANRMQIGQASAATYLNRARRKLKAETVRQAVAIWTGDYEQ EEHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA