| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is thrC [H]
Identifier: 213692715
GI number: 213692715
Start: 2016318
End: 2017808
Strand: Direct
Name: thrC [H]
Synonym: Blon_1848
Alternate gene names: 213692715
Gene position: 2016318-2017808 (Clockwise)
Preceding gene: 213692710
Following gene: 213692722
Centisome position: 71.18
GC content: 64.19
Gene sequence:
>1491_bases GTGACAACCACCTTCCATTCCACCCGCAGCACCACCGATTCGCTGACCGCCAAGCAGGCGATTCGTAAGGGCATCGCCGA TGACGGCGGCCTGTTCGTTTCGGACGCGTTGGGCAAGACCAAGGTGGACGTGGCCTCCCTGCCGGGCAAGTCGTACCAGC AAATCGCCGCCGAGGTGCTGGGCGCGCTGCTGCCGGACTTCACGGCCGAGGAGCTGGGCCAGTGCATCGCCGACGCCTAC GGCAAACAGTGGTCCGATGAGCGCATCACCCCACTCAAGCCCCTGGGTGACGATTACGTGCTCGAACTGTTCAACGGTCC GACTTCCGCGTTCAAGGACGTGGCGCTGCAGATCCTGCCGCGCTTCATGGCGCACACCACGCCGGCCGATGGCAACGCGG ACGAGAAAATCATGATCCTCACCGCCACCTCCGGCGACACCGGCAAGGCCGCGCTGGCCGGCTTCGCGGACGCCCCGGGC ACCGCGATCACCGTCTTCTACCCGGAAGGCAAGGTCTCCCAGGTCCAGGAGCTGCAGATGACCACGCAGGCCGGCGCCAA CGTGCATGTGGCCGCCGTGGAAGGCAACTTCGACGACGCCCAGTCCGCGGTCAAACGCATCTTCGGCGACCGCGCCCTGG CCGAGCGTCTCGCCGGCAATTCGCACGTGGTACTTTCCTCCGCCAACTCCATCAACGTGGGCCGTCTGGTGCCGCAGGTC GTCTACTACTTCTCCGCTTACGCCCAGCTGCTCGCCGACCAGGTGATCAATGTCGGCGATGAGGTCGAGTTTGTGGTCCC GACCGGCAATTTCGGCGATATCCTCGCCGGCTACTATGCCAAGCTGCTCGGTCTGCCGGTCAAGCACCTCGTGGTGGCTT CCGACAAGAACAACGTGCTGTTCGACTTCCTGACCACCGGTACCTACAACCGCCAGCGCCCGTTCTTCCAGACCATCTCC CCCTCGATGGACATCCTCATCTCCTCCAACCTGGAGCGCATGCTGTACTACTTGTCCGAGGGCGACACCCGTCTGATCTC CATGCTGATGAACGACCTCAACAAGTGGGGCACGTACGAGATCCCGGAAGAACTGCTGGCCAAGATTCGTCAGATCTTCG GCACCGGTTGGGCCGATGAGGATCAGGTACGCGAGTCCATCAAGCACTGCTGGGACGAGAACCACTACGTGATCGACCCG CACACCGCCTGCGGCTACTACCTGCTTGAGCAGATGCCGCGAGACCCGCTGACCCCGCGCGTGCTGCTCTCCACCGCCAG CCCCTACAAGTTCCCGCGCGTGGTGAACGAGGCATTGGGCTTCGACGCCACCGGCACCGACTTCGAGTGCATGGATGTGC TGGCCCACGAGACCGGCACCACCGCCCCGGCCGCCCTGCGTGGTCTCGAGACCGCCGACGTGCGTTTCAAGGACGTCGTG GCCATCGACGGCATGGAGGACTACGTGGAGAAGGCCGCCCAGGCGCTGTAA
Upstream 100 bases:
>100_bases GGTGCGACCGGTCGGCTACGCGAGACGGACGGCCCTTCTGCCCACGGCCCACGCTAGACTGGTGTGGATTCATCATCCCT TTCAGGCAGAAGGATTCATC
Downstream 100 bases:
>100_bases ACATACCAGCACATTGGCTCCCCTCAGAGAGGGGAGCCATTTTTTACATCAGAATTGCGTTTACATCAGTATCGCGGCGA CTGGCAGTCCTATGGCGATT
Product: threonine synthase
Products: NA
Alternate protein names: TS [H]
Number of amino acids: Translated: 496; Mature: 495
Protein sequence:
>496_residues MTTTFHSTRSTTDSLTAKQAIRKGIADDGGLFVSDALGKTKVDVASLPGKSYQQIAAEVLGALLPDFTAEELGQCIADAY GKQWSDERITPLKPLGDDYVLELFNGPTSAFKDVALQILPRFMAHTTPADGNADEKIMILTATSGDTGKAALAGFADAPG TAITVFYPEGKVSQVQELQMTTQAGANVHVAAVEGNFDDAQSAVKRIFGDRALAERLAGNSHVVLSSANSINVGRLVPQV VYYFSAYAQLLADQVINVGDEVEFVVPTGNFGDILAGYYAKLLGLPVKHLVVASDKNNVLFDFLTTGTYNRQRPFFQTIS PSMDILISSNLERMLYYLSEGDTRLISMLMNDLNKWGTYEIPEELLAKIRQIFGTGWADEDQVRESIKHCWDENHYVIDP HTACGYYLLEQMPRDPLTPRVLLSTASPYKFPRVVNEALGFDATGTDFECMDVLAHETGTTAPAALRGLETADVRFKDVV AIDGMEDYVEKAAQAL
Sequences:
>Translated_496_residues MTTTFHSTRSTTDSLTAKQAIRKGIADDGGLFVSDALGKTKVDVASLPGKSYQQIAAEVLGALLPDFTAEELGQCIADAY GKQWSDERITPLKPLGDDYVLELFNGPTSAFKDVALQILPRFMAHTTPADGNADEKIMILTATSGDTGKAALAGFADAPG TAITVFYPEGKVSQVQELQMTTQAGANVHVAAVEGNFDDAQSAVKRIFGDRALAERLAGNSHVVLSSANSINVGRLVPQV VYYFSAYAQLLADQVINVGDEVEFVVPTGNFGDILAGYYAKLLGLPVKHLVVASDKNNVLFDFLTTGTYNRQRPFFQTIS PSMDILISSNLERMLYYLSEGDTRLISMLMNDLNKWGTYEIPEELLAKIRQIFGTGWADEDQVRESIKHCWDENHYVIDP HTACGYYLLEQMPRDPLTPRVLLSTASPYKFPRVVNEALGFDATGTDFECMDVLAHETGTTAPAALRGLETADVRFKDVV AIDGMEDYVEKAAQAL >Mature_495_residues TTTFHSTRSTTDSLTAKQAIRKGIADDGGLFVSDALGKTKVDVASLPGKSYQQIAAEVLGALLPDFTAEELGQCIADAYG KQWSDERITPLKPLGDDYVLELFNGPTSAFKDVALQILPRFMAHTTPADGNADEKIMILTATSGDTGKAALAGFADAPGT AITVFYPEGKVSQVQELQMTTQAGANVHVAAVEGNFDDAQSAVKRIFGDRALAERLAGNSHVVLSSANSINVGRLVPQVV YYFSAYAQLLADQVINVGDEVEFVVPTGNFGDILAGYYAKLLGLPVKHLVVASDKNNVLFDFLTTGTYNRQRPFFQTISP SMDILISSNLERMLYYLSEGDTRLISMLMNDLNKWGTYEIPEELLAKIRQIFGTGWADEDQVRESIKHCWDENHYVIDPH TACGYYLLEQMPRDPLTPRVLLSTASPYKFPRVVNEALGFDATGTDFECMDVLAHETGTTAPAALRGLETADVRFKDVVA IDGMEDYVEKAAQAL
Specific function: Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine [H]
COG id: COG0498
COG function: function code E; Threonine synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the threonine synthase family [H]
Homologues:
Organism=Homo sapiens, GI153792148, Length=457, Percent_Identity=39.3873085339169, Blast_Score=308, Evalue=9e-84, Organism=Homo sapiens, GI149193323, Length=437, Percent_Identity=32.2654462242563, Blast_Score=220, Evalue=2e-57, Organism=Escherichia coli, GI1786185, Length=443, Percent_Identity=30.4740406320542, Blast_Score=176, Evalue=3e-45, Organism=Saccharomyces cerevisiae, GI6319901, Length=495, Percent_Identity=36.969696969697, Blast_Score=263, Evalue=4e-71,
Paralogues:
None
Copy number: 560 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001926 - InterPro: IPR000634 - InterPro: IPR004450 [H]
Pfam domain/function: PF00291 PALP [H]
EC number: =4.2.3.1 [H]
Molecular weight: Translated: 54055; Mature: 53923
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: PS00165 DEHYDRATASE_SER_THR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTTFHSTRSTTDSLTAKQAIRKGIADDGGLFVSDALGKTKVDVASLPGKSYQQIAAEVL CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCCEEHHHCCCHHHHHHHHHHH GALLPDFTAEELGQCIADAYGKQWSDERITPLKPLGDDYVLELFNGPTSAFKDVALQILP HHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHH RFMAHTTPADGNADEKIMILTATSGDTGKAALAGFADAPGTAITVFYPEGKVSQVQELQM HHHHCCCCCCCCCCCEEEEEEECCCCCCCHHHHCCCCCCCCEEEEECCCCCHHHHHHHHH TTQAGANVHVAAVEGNFDDAQSAVKRIFGDRALAERLAGNSHVVLSSANSINVGRLVPQV HHHCCCCEEEEEEECCCHHHHHHHHHHHCHHHHHHHHCCCCEEEEECCCCCCHHHHHHHH VYYFSAYAQLLADQVINVGDEVEFVVPTGNFGDILAGYYAKLLGLPVKHLVVASDKNNVL HHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHCCCHHHEEEECCCCCEE FDFLTTGTYNRQRPFFQTISPSMDILISSNLERMLYYLSEGDTRLISMLMNDLNKWGTYE EEEEECCCCCCCCCHHHHCCCCHHEEECCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCC IPEELLAKIRQIFGTGWADEDQVRESIKHCWDENHYVIDPHTACGYYLLEQMPRDPLTPR CCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHCCCCCCCCE VLLSTASPYKFPRVVNEALGFDATGTDFECMDVLAHETGTTAPAALRGLETADVRFKDVV EEEECCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCHHHHHCCCCCCCEEEHEE AIDGMEDYVEKAAQAL EECCHHHHHHHHHHCC >Mature Secondary Structure TTTFHSTRSTTDSLTAKQAIRKGIADDGGLFVSDALGKTKVDVASLPGKSYQQIAAEVL CCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCCEEHHHCCCHHHHHHHHHHH GALLPDFTAEELGQCIADAYGKQWSDERITPLKPLGDDYVLELFNGPTSAFKDVALQILP HHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHH RFMAHTTPADGNADEKIMILTATSGDTGKAALAGFADAPGTAITVFYPEGKVSQVQELQM HHHHCCCCCCCCCCCEEEEEEECCCCCCCHHHHCCCCCCCCEEEEECCCCCHHHHHHHHH TTQAGANVHVAAVEGNFDDAQSAVKRIFGDRALAERLAGNSHVVLSSANSINVGRLVPQV HHHCCCCEEEEEEECCCHHHHHHHHHHHCHHHHHHHHCCCCEEEEECCCCCCHHHHHHHH VYYFSAYAQLLADQVINVGDEVEFVVPTGNFGDILAGYYAKLLGLPVKHLVVASDKNNVL HHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHCCCHHHEEEECCCCCEE FDFLTTGTYNRQRPFFQTISPSMDILISSNLERMLYYLSEGDTRLISMLMNDLNKWGTYE EEEEECCCCCCCCCHHHHCCCCHHEEECCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCC IPEELLAKIRQIFGTGWADEDQVRESIKHCWDENHYVIDPHTACGYYLLEQMPRDPLTPR CCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHCCCCCCCCE VLLSTASPYKFPRVVNEALGFDATGTDFECMDVLAHETGTTAPAALRGLETADVRFKDVV EEEECCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCHHHHHCCCCCCCEEEHEE AIDGMEDYVEKAAQAL EECCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1333566; 10984043 [H]