| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692718
Identifier: 213692718
GI number: 213692718
Start: 2020123
End: 2020836
Strand: Reverse
Name: 213692718
Synonym: Blon_1852
Alternate gene names: NA
Gene position: 2020836-2020123 (Counterclockwise)
Preceding gene: 213692719
Following gene: 213692717
Centisome position: 71.34
GC content: 53.5
Gene sequence:
>714_bases ATGAGCTGGAAATCCGTAGTAAAGCAATGTCGATTCGATTGTGTCGGGACGGGTCTGTTCAGCGTGGCGAATATGGTATT TCTGCTGGTTTTCCCGGTGCTGTCTATCGTGATATCGCTGGTGATGATATCGACCCACGTCGATGAACACGTTGCCAGTG GTCTGATGGGCGGACTCGGAGGTTTGGCATCGACGATGGCATGTATGAGTGCATTGGGGCCTGCGTCATCCGAGGAATCT GCAGGGCACAGTGCCATGCGAGGGCTGATTCCTGTTTCACGCACTGCACAAGTTGTAGGTCGGTACCTTTTTCTGTTGGT GGTTGGCCTGCTCTGGGCTTTGGACGTGGTGATATGCGGCGGCGTCTTCATTGTCTTTGGCGATATAGCAGATATGGGGT GGATTGGTACCTTGGCAGCAGGTGCTTCCATCTTCGCTTTGGCTATCATTCTTGGGTCGGTGCTGCTGGCCTGTGCATAC CGGTTCACCTCCCGCAAGATGATGATGGCCTCTGGCGCGGTCATTGTCGGCTTGTATGCAGTCATTGCGCTGCTGGCCCG ATTGCCTGTTGACTGGCAATGGCTATTGCTGAATATTGCCGATTTCCTGACGATCTGGTGGCATACGGCGCTTGTTCTCG CCGTGTTGTGTCTGCTCGCATATTTTGGCTCCATGCTTATAGCCATCCGCATCTACCGAGCCAAAGAACTCTAA
Upstream 100 bases:
>100_bases GATTGTGGCTGGTTATTGCGGTATTGACAACGACGGTTGTGGCATATGGAATCTCGTATGTAATTGCCTCTCGCATATTT GCTTCAAGGGAATGGTGACG
Downstream 100 bases:
>100_bases CCGCGCATCTGTCCGACCGCGATGATCTTCAGCCACATGTCGATCGGCAGCGGCACGGTGCGGAACATCGCTCCGCCGAA CTGCACCACCAGCACCTGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 237; Mature: 236
Protein sequence:
>237_residues MSWKSVVKQCRFDCVGTGLFSVANMVFLLVFPVLSIVISLVMISTHVDEHVASGLMGGLGGLASTMACMSALGPASSEES AGHSAMRGLIPVSRTAQVVGRYLFLLVVGLLWALDVVICGGVFIVFGDIADMGWIGTLAAGASIFALAIILGSVLLACAY RFTSRKMMMASGAVIVGLYAVIALLARLPVDWQWLLLNIADFLTIWWHTALVLAVLCLLAYFGSMLIAIRIYRAKEL
Sequences:
>Translated_237_residues MSWKSVVKQCRFDCVGTGLFSVANMVFLLVFPVLSIVISLVMISTHVDEHVASGLMGGLGGLASTMACMSALGPASSEES AGHSAMRGLIPVSRTAQVVGRYLFLLVVGLLWALDVVICGGVFIVFGDIADMGWIGTLAAGASIFALAIILGSVLLACAY RFTSRKMMMASGAVIVGLYAVIALLARLPVDWQWLLLNIADFLTIWWHTALVLAVLCLLAYFGSMLIAIRIYRAKEL >Mature_236_residues SWKSVVKQCRFDCVGTGLFSVANMVFLLVFPVLSIVISLVMISTHVDEHVASGLMGGLGGLASTMACMSALGPASSEESA GHSAMRGLIPVSRTAQVVGRYLFLLVVGLLWALDVVICGGVFIVFGDIADMGWIGTLAAGASIFALAIILGSVLLACAYR FTSRKMMMASGAVIVGLYAVIALLARLPVDWQWLLLNIADFLTIWWHTALVLAVLCLLAYFGSMLIAIRIYRAKEL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25307; Mature: 25176
Theoretical pI: Translated: 8.13; Mature: 8.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 7.6 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 7.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSWKSVVKQCRFDCVGTGLFSVANMVFLLVFPVLSIVISLVMISTHVDEHVASGLMGGLG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLASTMACMSALGPASSEESAGHSAMRGLIPVSRTAQVVGRYLFLLVVGLLWALDVVICG HHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GVFIVFGDIADMGWIGTLAAGASIFALAIILGSVLLACAYRFTSRKMMMASGAVIVGLYA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH VIALLARLPVDWQWLLLNIADFLTIWWHTALVLAVLCLLAYFGSMLIAIRIYRAKEL HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SWKSVVKQCRFDCVGTGLFSVANMVFLLVFPVLSIVISLVMISTHVDEHVASGLMGGLG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLASTMACMSALGPASSEESAGHSAMRGLIPVSRTAQVVGRYLFLLVVGLLWALDVVICG HHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GVFIVFGDIADMGWIGTLAAGASIFALAIILGSVLLACAYRFTSRKMMMASGAVIVGLYA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH VIALLARLPVDWQWLLLNIADFLTIWWHTALVLAVLCLLAYFGSMLIAIRIYRAKEL HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA