| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692716
Identifier: 213692716
GI number: 213692716
Start: 2017869
End: 2019014
Strand: Reverse
Name: 213692716
Synonym: Blon_1849
Alternate gene names: NA
Gene position: 2019014-2017869 (Counterclockwise)
Preceding gene: 213692717
Following gene: 213692714
Centisome position: 71.27
GC content: 59.25
Gene sequence:
>1146_bases ATGAATAATACAGTCGTGTCGATGAACATCGCGTTGTGTGCGTTTTTACTGTTGCCGGTGATAGTGACCGCCGGCCTGGC AGGGGTTCCATGGGTTACCGACCGGCATGAGGTGTTCGGTGTCACAGTGCCGGCCGCCGCCCATGTCAATACGCGCATTC GCGGATTTAAAGTCGCGTTTTCGGGAATTACGGTGGCGCTTGGCGTATGCGCCATACTGGTCTCGCTGGCCGTTTGGCAA CTCTGCGGAGTCGACGCGGCGTTCTGGACTGTGTCCATCGCAGCGGTGGCGATTGCGATATGTGGTTTCGTGCTGCAGCA GATGTTTCGCCGCAAAGTACTGTCCATCAAAACCAATCAGGGATGGGAGGCGTCCAGTGCTCGCCGTGCGGCATTGATAG GTGAGCGGGACAATCCCGACCCGCTGAGCCTGAAGTGGGAATTGCTGCAAGTCGTTTGTCTCGCTGTCACCATTGCGGTC GGGCTGCTGGGCTATGACCGGATGCCGGAGCGGGTGCCGATTCATGCGGATATCGCCGGCAATGTGAACGGCTGGGCCGA GAAGAGTCCGATGGTGATTTGGTACGCCGTGCTCGCGCAGGTGGTGCTGGCAGCGGTGATGGTGGCCAGCCATGTCGCGA TCATCTACGCCAAGCACCCGATTGATCCCGACCACCCCGCCACCACCGGGTATGCCTATGGTGTGTTCTCGCGGGTCTGG AGCATCTACGTGCTGGTCATCGGACTGCTGACAGCCGGTGGATTGGGCCTAGGCGTTCAGCTTGTCGCCATTGGCGTGCT GGATGTCAATCTAATCGGCATCATCGGCATGTTCATCGCTGTGGCGGCTCTGGTCGGCGCGCTGATGATCGGCGTGTATT ACGGGCAGAACGGGGCGCGCGTCTATGCCGGTGTTCGGCACAGTGACGGCGGTGACGATTCGGACGATGATGTTATGCCG TATGACGATGACCTGCACTGGATTGGCGGCATCATCTACATCAACCGTGACGATCCGGCCATCATGGTTCCTAAACGTTT CGGCGTCGGCTGGACCGTCAACCTCGCACGCCCCAGCGTGATCATCGGCACTATCGTGCTGTTGGCAATCGCCATAGGAC TGCCAGTCGCCGCGATACTGATGTAA
Upstream 100 bases:
>100_bases TCCTCGATGCCACCAAACGGCAATGCGAACGGGCATACGGCGTGCGCTCCTCGCAGAGCGTTACTGACGGTGCAACAAAA GGAAATCAGGGGAGATAACG
Downstream 100 bases:
>100_bases ACGCAATTCTGATGTAAAAAATGGCTCCCCTCTCTGAGGGGAGCCAATGTGCTGGTATGTTTACAGCGCCTGGGCGGCCT TCTCCACGTAGTCCTCCATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 381; Mature: 381
Protein sequence:
>381_residues MNNTVVSMNIALCAFLLLPVIVTAGLAGVPWVTDRHEVFGVTVPAAAHVNTRIRGFKVAFSGITVALGVCAILVSLAVWQ LCGVDAAFWTVSIAAVAIAICGFVLQQMFRRKVLSIKTNQGWEASSARRAALIGERDNPDPLSLKWELLQVVCLAVTIAV GLLGYDRMPERVPIHADIAGNVNGWAEKSPMVIWYAVLAQVVLAAVMVASHVAIIYAKHPIDPDHPATTGYAYGVFSRVW SIYVLVIGLLTAGGLGLGVQLVAIGVLDVNLIGIIGMFIAVAALVGALMIGVYYGQNGARVYAGVRHSDGGDDSDDDVMP YDDDLHWIGGIIYINRDDPAIMVPKRFGVGWTVNLARPSVIIGTIVLLAIAIGLPVAAILM
Sequences:
>Translated_381_residues MNNTVVSMNIALCAFLLLPVIVTAGLAGVPWVTDRHEVFGVTVPAAAHVNTRIRGFKVAFSGITVALGVCAILVSLAVWQ LCGVDAAFWTVSIAAVAIAICGFVLQQMFRRKVLSIKTNQGWEASSARRAALIGERDNPDPLSLKWELLQVVCLAVTIAV GLLGYDRMPERVPIHADIAGNVNGWAEKSPMVIWYAVLAQVVLAAVMVASHVAIIYAKHPIDPDHPATTGYAYGVFSRVW SIYVLVIGLLTAGGLGLGVQLVAIGVLDVNLIGIIGMFIAVAALVGALMIGVYYGQNGARVYAGVRHSDGGDDSDDDVMP YDDDLHWIGGIIYINRDDPAIMVPKRFGVGWTVNLARPSVIIGTIVLLAIAIGLPVAAILM >Mature_381_residues MNNTVVSMNIALCAFLLLPVIVTAGLAGVPWVTDRHEVFGVTVPAAAHVNTRIRGFKVAFSGITVALGVCAILVSLAVWQ LCGVDAAFWTVSIAAVAIAICGFVLQQMFRRKVLSIKTNQGWEASSARRAALIGERDNPDPLSLKWELLQVVCLAVTIAV GLLGYDRMPERVPIHADIAGNVNGWAEKSPMVIWYAVLAQVVLAAVMVASHVAIIYAKHPIDPDHPATTGYAYGVFSRVW SIYVLVIGLLTAGGLGLGVQLVAIGVLDVNLIGIIGMFIAVAALVGALMIGVYYGQNGARVYAGVRHSDGGDDSDDDVMP YDDDLHWIGGIIYINRDDPAIMVPKRFGVGWTVNLARPSVIIGTIVLLAIAIGLPVAAILM
Specific function: Unknown
COG id: COG4194
COG function: function code R; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40454; Mature: 40454
Theoretical pI: Translated: 6.71; Mature: 6.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNTVVSMNIALCAFLLLPVIVTAGLAGVPWVTDRHEVFGVTVPAAAHVNTRIRGFKVAF CCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCHHCCCCCCEEEEEEH SGITVALGVCAILVSLAVWQLCGVDAAFWTVSIAAVAIAICGFVLQQMFRRKVLSIKTNQ HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCC GWEASSARRAALIGERDNPDPLSLKWELLQVVCLAVTIAVGLLGYDRMPERVPIHADIAG CCCCCCCCHHHEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCC NVNGWAEKSPMVIWYAVLAQVVLAAVMVASHVAIIYAKHPIDPDHPATTGYAYGVFSRVW CCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCHHHHHHHHHH SIYVLVIGLLTAGGLGLGVQLVAIGVLDVNLIGIIGMFIAVAALVGALMIGVYYGQNGAR HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE VYAGVRHSDGGDDSDDDVMPYDDDLHWIGGIIYINRDDPAIMVPKRFGVGWTVNLARPSV EEEEEECCCCCCCCCCCCCCCCCCCEEECEEEEEECCCCEEECCCCCCCCEEEECCCCHH IIGTIVLLAIAIGLPVAAILM HHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNNTVVSMNIALCAFLLLPVIVTAGLAGVPWVTDRHEVFGVTVPAAAHVNTRIRGFKVAF CCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCHHCCCCCCEEEEEEH SGITVALGVCAILVSLAVWQLCGVDAAFWTVSIAAVAIAICGFVLQQMFRRKVLSIKTNQ HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCC GWEASSARRAALIGERDNPDPLSLKWELLQVVCLAVTIAVGLLGYDRMPERVPIHADIAG CCCCCCCCHHHEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCC NVNGWAEKSPMVIWYAVLAQVVLAAVMVASHVAIIYAKHPIDPDHPATTGYAYGVFSRVW CCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCHHHHHHHHHH SIYVLVIGLLTAGGLGLGVQLVAIGVLDVNLIGIIGMFIAVAALVGALMIGVYYGQNGAR HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE VYAGVRHSDGGDDSDDDVMPYDDDLHWIGGIIYINRDDPAIMVPKRFGVGWTVNLARPSV EEEEEECCCCCCCCCCCCCCCCCCCEEECEEEEEECCCCEEECCCCCCCCEEEECCCCHH IIGTIVLLAIAIGLPVAAILM HHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA