| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is folD [H]
Identifier: 213692622
GI number: 213692622
Start: 1928825
End: 1929700
Strand: Reverse
Name: folD [H]
Synonym: Blon_1755
Alternate gene names: 213692622
Gene position: 1929700-1928825 (Counterclockwise)
Preceding gene: 213692626
Following gene: 213692621
Centisome position: 68.12
GC content: 63.01
Gene sequence:
>876_bases ATGTCCACAAAAATCGACGGTAAGCAGATTGCGGCCGAAATCAAGACCAACCTTGCCGAGCGAGTGAACAGGCTCAAGGC GCAGGGCATCCAACCAGGGCTGGGCACGCTGCTGGTGGGCGAAGACCCCGGGTCGATGAAGTACGTGGCCGGCAAGCACG CCGATTGTCAGGAAGTGGGCATTACCTCAGTCAAGAAGGAACTGCCGGCGGACGCCAGCTTCGACGACATCGCCGCTACC GTACGCGAACTCAACGAAGATCCGGCCTGCACCGGGTTCATCGTCCAGTTGCCGTTGCCCAAGGGCATCAACGAGAACGC GATCATCGACATGATCGACCCGGCCAAGGATGCCGACGGCATGCACCCGTACAACCTCGGCGAACTGGTGCTGCATGTGC GCGGCGACATTTCGACACCGCTGCCTTGCACTCCGCGCGGTGTGCTCGAGCTGCTCGACGCCTATGACATTGATCTGAAC GGCAAGGAAGTGTGCGTGCTTGGCCGCGGCATCACCATTGGCCGCACGATTGGCCTGATGCTCACGCGCAACGCCGTCAA CGCCACCGTCACCCTGTGCCACACCGGTACCCGGGATGTGGCCGACCACATGCGCCGCGCCGACGTGATCGTCGCCGCAA TGGGTTCGGCCGGATTCGTGACGCCCGACAAGATCAAGGACGGCGCCGTGCTGGTCGACGTGGGCATCAGCCGCGTCTAC GACGAAGAAGCCGGTCGCTACCGCATCAAGGGCGACGTGGACAAGGCCTGCTATGACAAGGCATCCGCCTACACCCCCAA CCCCGGAGGCGTGGGCCCTATGACCCGAGCCATGCTCCTGGCCAACGTCGTGGAAATGGCCGAACGACACGCCTAG
Upstream 100 bases:
>100_bases ACGCCTTCTTCGTGAGAGCGAACGATATATAATCCTGACTTGTTCCAACGATAGCCTATCGTTTCGATAGAATGCACCGA AACTACAGGGGAGGGCGTTG
Downstream 100 bases:
>100_bases AGTTTCCTAGGAAATTTGGGCAGAGTTGCTTGTATTGTGAATATCCGTATGCCTGTAAGGGTGTGCGTATAACTGAATAT CGAGAAATTATCCATCCACT
Product: bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase
Products: NA
Alternate protein names: Methylenetetrahydrofolate dehydrogenase; Methenyltetrahydrofolate cyclohydrolase [H]
Number of amino acids: Translated: 291; Mature: 290
Protein sequence:
>291_residues MSTKIDGKQIAAEIKTNLAERVNRLKAQGIQPGLGTLLVGEDPGSMKYVAGKHADCQEVGITSVKKELPADASFDDIAAT VRELNEDPACTGFIVQLPLPKGINENAIIDMIDPAKDADGMHPYNLGELVLHVRGDISTPLPCTPRGVLELLDAYDIDLN GKEVCVLGRGITIGRTIGLMLTRNAVNATVTLCHTGTRDVADHMRRADVIVAAMGSAGFVTPDKIKDGAVLVDVGISRVY DEEAGRYRIKGDVDKACYDKASAYTPNPGGVGPMTRAMLLANVVEMAERHA
Sequences:
>Translated_291_residues MSTKIDGKQIAAEIKTNLAERVNRLKAQGIQPGLGTLLVGEDPGSMKYVAGKHADCQEVGITSVKKELPADASFDDIAAT VRELNEDPACTGFIVQLPLPKGINENAIIDMIDPAKDADGMHPYNLGELVLHVRGDISTPLPCTPRGVLELLDAYDIDLN GKEVCVLGRGITIGRTIGLMLTRNAVNATVTLCHTGTRDVADHMRRADVIVAAMGSAGFVTPDKIKDGAVLVDVGISRVY DEEAGRYRIKGDVDKACYDKASAYTPNPGGVGPMTRAMLLANVVEMAERHA >Mature_290_residues STKIDGKQIAAEIKTNLAERVNRLKAQGIQPGLGTLLVGEDPGSMKYVAGKHADCQEVGITSVKKELPADASFDDIAATV RELNEDPACTGFIVQLPLPKGINENAIIDMIDPAKDADGMHPYNLGELVLHVRGDISTPLPCTPRGVLELLDAYDIDLNG KEVCVLGRGITIGRTIGLMLTRNAVNATVTLCHTGTRDVADHMRRADVIVAAMGSAGFVTPDKIKDGAVLVDVGISRVYD EEAGRYRIKGDVDKACYDKASAYTPNPGGVGPMTRAMLLANVVEMAERHA
Specific function: Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate [H]
COG id: COG0190
COG function: function code H; 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tetrahydrofolate dehydrogenase/cyclohydrolase family [H]
Homologues:
Organism=Homo sapiens, GI222136639, Length=294, Percent_Identity=38.4353741496599, Blast_Score=177, Evalue=1e-44, Organism=Homo sapiens, GI94721354, Length=295, Percent_Identity=37.9661016949153, Blast_Score=173, Evalue=2e-43, Organism=Homo sapiens, GI222418558, Length=295, Percent_Identity=37.2881355932203, Blast_Score=170, Evalue=1e-42, Organism=Escherichia coli, GI1786741, Length=283, Percent_Identity=39.9293286219081, Blast_Score=196, Evalue=2e-51, Organism=Caenorhabditis elegans, GI17568735, Length=294, Percent_Identity=35.0340136054422, Blast_Score=149, Evalue=2e-36, Organism=Saccharomyces cerevisiae, GI6319558, Length=291, Percent_Identity=37.8006872852234, Blast_Score=192, Evalue=6e-50, Organism=Saccharomyces cerevisiae, GI6321643, Length=301, Percent_Identity=35.5481727574751, Blast_Score=172, Evalue=5e-44, Organism=Drosophila melanogaster, GI17136816, Length=300, Percent_Identity=41.3333333333333, Blast_Score=225, Evalue=2e-59, Organism=Drosophila melanogaster, GI17136818, Length=300, Percent_Identity=41.3333333333333, Blast_Score=225, Evalue=3e-59, Organism=Drosophila melanogaster, GI62472483, Length=292, Percent_Identity=37.6712328767123, Blast_Score=164, Evalue=7e-41, Organism=Drosophila melanogaster, GI45551871, Length=292, Percent_Identity=37.6712328767123, Blast_Score=164, Evalue=7e-41, Organism=Drosophila melanogaster, GI24645718, Length=292, Percent_Identity=37.6712328767123, Blast_Score=164, Evalue=8e-41, Organism=Drosophila melanogaster, GI17137370, Length=292, Percent_Identity=37.6712328767123, Blast_Score=164, Evalue=8e-41,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016040 - InterPro: IPR000672 - InterPro: IPR020630 - InterPro: IPR020631 [H]
Pfam domain/function: PF00763 THF_DHG_CYH; PF02882 THF_DHG_CYH_C [H]
EC number: =1.5.1.5; =3.5.4.9 [H]
Molecular weight: Translated: 31003; Mature: 30872
Theoretical pI: Translated: 5.21; Mature: 5.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTKIDGKQIAAEIKTNLAERVNRLKAQGIQPGLGTLLVGEDPGSMKYVAGKHADCQEVG CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCEEEECCCCCCHHHHC ITSVKKELPADASFDDIAATVRELNEDPACTGFIVQLPLPKGINENAIIDMIDPAKDADG HHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCEEEECCCCCCCCC MHPYNLGELVLHVRGDISTPLPCTPRGVLELLDAYDIDLNGKEVCVLGRGITIGRTIGLM CCCCCHHHEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCEEEHHHEEEE LTRNAVNATVTLCHTGTRDVADHMRRADVIVAAMGSAGFVTPDKIKDGAVLVDVGISRVY EECCCCCEEEEEEECCCHHHHHHHHHHCEEEEECCCCCCCCCCCCCCCEEEEECCHHHHH DEEAGRYRIKGDVDKACYDKASAYTPNPGGVGPMTRAMLLANVVEMAERHA HHCCCCEEECCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure STKIDGKQIAAEIKTNLAERVNRLKAQGIQPGLGTLLVGEDPGSMKYVAGKHADCQEVG CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCEEEECCCCCCHHHHC ITSVKKELPADASFDDIAATVRELNEDPACTGFIVQLPLPKGINENAIIDMIDPAKDADG HHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCEEEECCCCCCCCC MHPYNLGELVLHVRGDISTPLPCTPRGVLELLDAYDIDLNGKEVCVLGRGITIGRTIGLM CCCCCHHHEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCEEEHHHEEEE LTRNAVNATVTLCHTGTRDVADHMRRADVIVAAMGSAGFVTPDKIKDGAVLVDVGISRVY EECCCCCEEEEEEECCCHHHHHHHHHHCEEEEECCCCCCCCCCCCCCCEEEEECCHHHHH DEEAGRYRIKGDVDKACYDKASAYTPNPGGVGPMTRAMLLANVVEMAERHA HHCCCCEEECCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12381787 [H]