| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692548
Identifier: 213692548
GI number: 213692548
Start: 1832765
End: 1833379
Strand: Reverse
Name: 213692548
Synonym: Blon_1680
Alternate gene names: NA
Gene position: 1833379-1832765 (Counterclockwise)
Preceding gene: 213692549
Following gene: 213692545
Centisome position: 64.72
GC content: 66.34
Gene sequence:
>615_bases ATGGCCGATGAGAACGAGCAGCAGACCGCATGCAAGGCAGGACGCGACGAGCAGCATTGCAAGTGCAAGCAGCGTAGGGA AGCCGCCGCGGCAGCCGAAGCGGCTGCCGCCAACGGCGAACACCACTGCGCCTGCAAGCACGAGCACGCCGAGGGCGCGG CCGCGGAGCCGGGCGCGAAGAAGGAGTGCCACTGCAAGCATGGCGAAGCCGCGGCCGCTGAAGCGGGTGAGGCCAAGCAC TGCGCCTGCAAGCACGACGCCCACGACGCCGAAGGCCACGCCATTTCGACCGAGCCGCATCTTGGATTCATCGAAGACTT GGCCTCGTTGATCGATATTCAGGAGGAGGCCACTGTCTCCCGTACGGTGCTGCGCGAGGACGGCCTGCGCGCCGTGCTGT TCGGCTTCGACAAGGACCAGGCACTGAGCGAGCACACCGCGGCCATGCCCGTGATCATCCAGGTGCTGGAAGGCAAGCTG CGCGTCGGCGGCGAAGGCCGTGAAGTCGAGCTTACGGCCGGCGGCATCGTCTACCTGAGCGCCCGTCTGCCGCACACCGT CTATGCCGTCGAACCCAGCAAGATGCTGCTGCAGATGTTCGACAACCGCGGCTGA
Upstream 100 bases:
>100_bases AGCGTAACAGCGGTGTGCCGGCCCACGATGGCCGGATAATGGGAAACGACCAAAAGCGATGACGCGTATGTGAGGTACGC GCGACGAATAGGAGAACATC
Downstream 100 bases:
>100_bases TTCGGTGAATGACTGGCAATCACGTATGAGAAGCTGATTGCCGTTAGACCATTCATAATGGCTTCCTTCATATGGTGTTG GTCGTATGACCGTAATATGA
Product: hypothetical protein
Products: NA
Alternate protein names: Cupin 2 Conserved Barrel Protein; Cupin 2 Conserved Barrel Domain-Containing Protein; Cupin Domain Protein; Cupin Region; Cupin 2 Conserved Barrel Domain Protein
Number of amino acids: Translated: 204; Mature: 203
Protein sequence:
>204_residues MADENEQQTACKAGRDEQHCKCKQRREAAAAAEAAAANGEHHCACKHEHAEGAAAEPGAKKECHCKHGEAAAAEAGEAKH CACKHDAHDAEGHAISTEPHLGFIEDLASLIDIQEEATVSRTVLREDGLRAVLFGFDKDQALSEHTAAMPVIIQVLEGKL RVGGEGREVELTAGGIVYLSARLPHTVYAVEPSKMLLQMFDNRG
Sequences:
>Translated_204_residues MADENEQQTACKAGRDEQHCKCKQRREAAAAAEAAAANGEHHCACKHEHAEGAAAEPGAKKECHCKHGEAAAAEAGEAKH CACKHDAHDAEGHAISTEPHLGFIEDLASLIDIQEEATVSRTVLREDGLRAVLFGFDKDQALSEHTAAMPVIIQVLEGKL RVGGEGREVELTAGGIVYLSARLPHTVYAVEPSKMLLQMFDNRG >Mature_203_residues ADENEQQTACKAGRDEQHCKCKQRREAAAAAEAAAANGEHHCACKHEHAEGAAAEPGAKKECHCKHGEAAAAEAGEAKHC ACKHDAHDAEGHAISTEPHLGFIEDLASLIDIQEEATVSRTVLREDGLRAVLFGFDKDQALSEHTAAMPVIIQVLEGKLR VGGEGREVELTAGGIVYLSARLPHTVYAVEPSKMLLQMFDNRG
Specific function: Unknown
COG id: COG1917
COG function: function code S; Uncharacterized conserved protein, contains double-stranded beta-helix domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21836; Mature: 21704
Theoretical pI: Translated: 5.67; Mature: 5.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 4.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADENEQQTACKAGRDEQHCKCKQRREAAAAAEAAAANGEHHCACKHEHAEGAAAEPGAK CCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCC KECHCKHGEAAAAEAGEAKHCACKHDAHDAEGHAISTEPHLGFIEDLASLIDIQEEATVS CCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHH RTVLREDGLRAVLFGFDKDQALSEHTAAMPVIIQVLEGKLRVGGEGREVELTAGGIVYLS HHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCHHEECCCCCEEEEECCCEEEEE ARLPHTVYAVEPSKMLLQMFDNRG ECCCEEEEEECHHHHHHHHHHCCC >Mature Secondary Structure ADENEQQTACKAGRDEQHCKCKQRREAAAAAEAAAANGEHHCACKHEHAEGAAAEPGAK CCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCC KECHCKHGEAAAAEAGEAKHCACKHDAHDAEGHAISTEPHLGFIEDLASLIDIQEEATVS CCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHH RTVLREDGLRAVLFGFDKDQALSEHTAAMPVIIQVLEGKLRVGGEGREVELTAGGIVYLS HHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCHHEECCCCCEEEEECCCEEEEE ARLPHTVYAVEPSKMLLQMFDNRG ECCCEEEEEECHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA