Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

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The map label for this gene is 213692479

Identifier: 213692479

GI number: 213692479

Start: 1760350

End: 1760952

Strand: Reverse

Name: 213692479

Synonym: Blon_1608

Alternate gene names: NA

Gene position: 1760952-1760350 (Counterclockwise)

Preceding gene: 213692480

Following gene: 213692476

Centisome position: 62.16

GC content: 43.62

Gene sequence:

>603_bases
ATGTTGGATATTCAAGATGATATCAGTAGCTACCTTGCCTTTTCGCACTATATCGATTGGAATGAACCGAGTGTGCAAAG
AAAAGCCAAGGAACTAAAAGACTCCACTGAAGGCGAAATCGAACTGGCAAAAGCCGCCTACTATTTTGTTAGAGATGAAA
TCAAGCATTCATGGGATGTCCAAGACAAAAGAGTCACGGCAACAGCCTCAGACGCATTAAGAGAGGGCGTCGGTATTTGT
TGGGCAAAATCTAATTTATTGGCCGCCCTATTAAGAGCAAATGGCATTCCTGCCGGAATATGCTATCAAAGGCTTACGTT
AGGCAGTACGCCTGAAAGCGGATACTGCATCCATGCCTTGAATGCCATTTATCTGAGATCCATTGACCGATGGATTCGTG
TAGATGCAAGAGGGAATAAAGAGGGTATACAAGCAGACTTTTCTGTTGACGATGAACGTTTGGCTTTCCCCATTCGGAAA
GAGTACGATGAGGTGGATTATAAAACTGTGTATGCCGAACCGTTGCCGCAGACAATGAGCATTCTTGAAAATAGTACAGA
TGCTCTATACATGTATCTGCATTCGCTGCCCGAAAGAATTTGA

Upstream 100 bases:

>100_bases
GCTTGGTGAGAAGCCGCTATGTCGGACTTGCTGAAACAACCAACCTCGCAACGGGGTAAAAAGTAAGAGAGCGACGAATC
GGGATTCTCGGAGGTGTTAT

Downstream 100 bases:

>100_bases
CGAATTCATTTTTATCGGGAGGCAGGAGGCAGCGGCTGTTTCGGACTGCATTAGCGGTTAGCGGGGAACGATTCGCCCGC
GACAACAGCCCATCACGCCA

Product: transglutaminase domain protein

Products: NA

Alternate protein names: Transglutaminase Domain Protein; Lipoprotein; Cro-Like Protein; GCN5-Related N-Acetyltransferase; Transglutaminase/Protease; Cysteine Protease; Transglutaminase-Like

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MLDIQDDISSYLAFSHYIDWNEPSVQRKAKELKDSTEGEIELAKAAYYFVRDEIKHSWDVQDKRVTATASDALREGVGIC
WAKSNLLAALLRANGIPAGICYQRLTLGSTPESGYCIHALNAIYLRSIDRWIRVDARGNKEGIQADFSVDDERLAFPIRK
EYDEVDYKTVYAEPLPQTMSILENSTDALYMYLHSLPERI

Sequences:

>Translated_200_residues
MLDIQDDISSYLAFSHYIDWNEPSVQRKAKELKDSTEGEIELAKAAYYFVRDEIKHSWDVQDKRVTATASDALREGVGIC
WAKSNLLAALLRANGIPAGICYQRLTLGSTPESGYCIHALNAIYLRSIDRWIRVDARGNKEGIQADFSVDDERLAFPIRK
EYDEVDYKTVYAEPLPQTMSILENSTDALYMYLHSLPERI
>Mature_200_residues
MLDIQDDISSYLAFSHYIDWNEPSVQRKAKELKDSTEGEIELAKAAYYFVRDEIKHSWDVQDKRVTATASDALREGVGIC
WAKSNLLAALLRANGIPAGICYQRLTLGSTPESGYCIHALNAIYLRSIDRWIRVDARGNKEGIQADFSVDDERLAFPIRK
EYDEVDYKTVYAEPLPQTMSILENSTDALYMYLHSLPERI

Specific function: Unknown

COG id: COG1305

COG function: function code E; Transglutaminase-like enzymes, putative cysteine proteases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22803; Mature: 22803

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDIQDDISSYLAFSHYIDWNEPSVQRKAKELKDSTEGEIELAKAAYYFVRDEIKHSWDV
CCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCC
QDKRVTATASDALREGVGICWAKSNLLAALLRANGIPAGICYQRLTLGSTPESGYCIHAL
CCCEEEHHHHHHHHCCCEEEEEHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCEEHHHH
NAIYLRSIDRWIRVDARGNKEGIQADFSVDDERLAFPIRKEYDEVDYKTVYAEPLPQTMS
HHHHHHHHHHHEEECCCCCCCCCEECCCCCCCCEECCHHHHHCCCCCEEEECCCCHHHHH
ILENSTDALYMYLHSLPERI
HHHCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MLDIQDDISSYLAFSHYIDWNEPSVQRKAKELKDSTEGEIELAKAAYYFVRDEIKHSWDV
CCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCC
QDKRVTATASDALREGVGICWAKSNLLAALLRANGIPAGICYQRLTLGSTPESGYCIHAL
CCCEEEHHHHHHHHCCCEEEEEHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCEEHHHH
NAIYLRSIDRWIRVDARGNKEGIQADFSVDDERLAFPIRKEYDEVDYKTVYAEPLPQTMS
HHHHHHHHHHHEEECCCCCCCCCEECCCCCCCCEECCHHHHHCCCCCEEEECCCCHHHHH
ILENSTDALYMYLHSLPERI
HHHCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA