| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692479
Identifier: 213692479
GI number: 213692479
Start: 1760350
End: 1760952
Strand: Reverse
Name: 213692479
Synonym: Blon_1608
Alternate gene names: NA
Gene position: 1760952-1760350 (Counterclockwise)
Preceding gene: 213692480
Following gene: 213692476
Centisome position: 62.16
GC content: 43.62
Gene sequence:
>603_bases ATGTTGGATATTCAAGATGATATCAGTAGCTACCTTGCCTTTTCGCACTATATCGATTGGAATGAACCGAGTGTGCAAAG AAAAGCCAAGGAACTAAAAGACTCCACTGAAGGCGAAATCGAACTGGCAAAAGCCGCCTACTATTTTGTTAGAGATGAAA TCAAGCATTCATGGGATGTCCAAGACAAAAGAGTCACGGCAACAGCCTCAGACGCATTAAGAGAGGGCGTCGGTATTTGT TGGGCAAAATCTAATTTATTGGCCGCCCTATTAAGAGCAAATGGCATTCCTGCCGGAATATGCTATCAAAGGCTTACGTT AGGCAGTACGCCTGAAAGCGGATACTGCATCCATGCCTTGAATGCCATTTATCTGAGATCCATTGACCGATGGATTCGTG TAGATGCAAGAGGGAATAAAGAGGGTATACAAGCAGACTTTTCTGTTGACGATGAACGTTTGGCTTTCCCCATTCGGAAA GAGTACGATGAGGTGGATTATAAAACTGTGTATGCCGAACCGTTGCCGCAGACAATGAGCATTCTTGAAAATAGTACAGA TGCTCTATACATGTATCTGCATTCGCTGCCCGAAAGAATTTGA
Upstream 100 bases:
>100_bases GCTTGGTGAGAAGCCGCTATGTCGGACTTGCTGAAACAACCAACCTCGCAACGGGGTAAAAAGTAAGAGAGCGACGAATC GGGATTCTCGGAGGTGTTAT
Downstream 100 bases:
>100_bases CGAATTCATTTTTATCGGGAGGCAGGAGGCAGCGGCTGTTTCGGACTGCATTAGCGGTTAGCGGGGAACGATTCGCCCGC GACAACAGCCCATCACGCCA
Product: transglutaminase domain protein
Products: NA
Alternate protein names: Transglutaminase Domain Protein; Lipoprotein; Cro-Like Protein; GCN5-Related N-Acetyltransferase; Transglutaminase/Protease; Cysteine Protease; Transglutaminase-Like
Number of amino acids: Translated: 200; Mature: 200
Protein sequence:
>200_residues MLDIQDDISSYLAFSHYIDWNEPSVQRKAKELKDSTEGEIELAKAAYYFVRDEIKHSWDVQDKRVTATASDALREGVGIC WAKSNLLAALLRANGIPAGICYQRLTLGSTPESGYCIHALNAIYLRSIDRWIRVDARGNKEGIQADFSVDDERLAFPIRK EYDEVDYKTVYAEPLPQTMSILENSTDALYMYLHSLPERI
Sequences:
>Translated_200_residues MLDIQDDISSYLAFSHYIDWNEPSVQRKAKELKDSTEGEIELAKAAYYFVRDEIKHSWDVQDKRVTATASDALREGVGIC WAKSNLLAALLRANGIPAGICYQRLTLGSTPESGYCIHALNAIYLRSIDRWIRVDARGNKEGIQADFSVDDERLAFPIRK EYDEVDYKTVYAEPLPQTMSILENSTDALYMYLHSLPERI >Mature_200_residues MLDIQDDISSYLAFSHYIDWNEPSVQRKAKELKDSTEGEIELAKAAYYFVRDEIKHSWDVQDKRVTATASDALREGVGIC WAKSNLLAALLRANGIPAGICYQRLTLGSTPESGYCIHALNAIYLRSIDRWIRVDARGNKEGIQADFSVDDERLAFPIRK EYDEVDYKTVYAEPLPQTMSILENSTDALYMYLHSLPERI
Specific function: Unknown
COG id: COG1305
COG function: function code E; Transglutaminase-like enzymes, putative cysteine proteases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22803; Mature: 22803
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDIQDDISSYLAFSHYIDWNEPSVQRKAKELKDSTEGEIELAKAAYYFVRDEIKHSWDV CCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCC QDKRVTATASDALREGVGICWAKSNLLAALLRANGIPAGICYQRLTLGSTPESGYCIHAL CCCEEEHHHHHHHHCCCEEEEEHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCEEHHHH NAIYLRSIDRWIRVDARGNKEGIQADFSVDDERLAFPIRKEYDEVDYKTVYAEPLPQTMS HHHHHHHHHHHEEECCCCCCCCCEECCCCCCCCEECCHHHHHCCCCCEEEECCCCHHHHH ILENSTDALYMYLHSLPERI HHHCCCHHHHHHHHHHHCCC >Mature Secondary Structure MLDIQDDISSYLAFSHYIDWNEPSVQRKAKELKDSTEGEIELAKAAYYFVRDEIKHSWDV CCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCC QDKRVTATASDALREGVGICWAKSNLLAALLRANGIPAGICYQRLTLGSTPESGYCIHAL CCCEEEHHHHHHHHCCCEEEEEHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCEEHHHH NAIYLRSIDRWIRVDARGNKEGIQADFSVDDERLAFPIRKEYDEVDYKTVYAEPLPQTMS HHHHHHHHHHHEEECCCCCCCCCEECCCCCCCCEECCHHHHHCCCCCEEEECCCCHHHHH ILENSTDALYMYLHSLPERI HHHCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA