| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is gpmA [H]
Identifier: 213692476
GI number: 213692476
Start: 1758597
End: 1759280
Strand: Reverse
Name: gpmA [H]
Synonym: Blon_1605
Alternate gene names: 213692476
Gene position: 1759280-1758597 (Counterclockwise)
Preceding gene: 213692479
Following gene: 213692475
Centisome position: 62.11
GC content: 56.14
Gene sequence:
>684_bases ATGGGAACCCTGATTCTGCATTTGCATCTGGTTCGTCATGGGCAAACCACGTTCAATAAATACAACCGTCTTCAGGGATG GTGCAATGCGCCGCTCACCGCATCCGGACTTGCCGATGCCGACAGGGCCGGGCACAAACTTAAGGGCTATGATTTTGCGG CGGCATATTGTTCCGATACTTCTCGCGCCGAAATCACAGCGAAGCGAATTCTCGATATCAATGAGGCTGCCGGACATGCA CGGCCAGAACTCACGGCCGATATGCATTTCCGCGAACAATGCTACGGATACTTCGAGGGTCAGGACATGTCGCTGGCTTG GACCGCTGCGGGTGGACCTCACGGCGCGAAGGACTACAACGACATCGTAGCCAAATTTGGTCTGGCCGCCTCCCGTGATT TCCTGAAAGAGGCCGACCCCTTCCATGACGCGGAATCCGATGAAGAATACTGGACGCGCGTCGAAGGAGCATTCCAGCTC ATCGCCAGCAACCCCAATCTCAAGGATGGCGATGATGTGCTTCAGATTTCGCACGGTAACACGCTGCTCAGCCTCGGCCA CCGTTTCGGAGGCCCCGATCTTGACCTTAGCGAACGACCGGCCAACGGCTCGGTAACCGTACTCGACTTCGACACGACCA AACCGTTTTCGCAGGCCGTGACCATCGTCTCATACGGCAAATAG
Upstream 100 bases:
>100_bases AGCACTCGCATGGGCCTGTTGTCGGTTTCGTCGACGGTCTCCTGCGGTTCGCGTGCCATGGAGGGGGCGACGGGCCTGCG TTTTAGCGGACTGCGGTAGC
Downstream 100 bases:
>100_bases CGTATTTTATCGTCAGTTGCACGGGTAAATAGGGGAGGAGTGCTACCCTTATCCGAGTAAGTGTGACCTCAAGGAGGCAA CAATGGAAGTCGGAGAGATC
Product: Phosphoglycerate mutase
Products: NA
Alternate protein names: BPG-dependent PGAM; PGAM; Phosphoglyceromutase; dPGM [H]
Number of amino acids: Translated: 227; Mature: 226
Protein sequence:
>227_residues MGTLILHLHLVRHGQTTFNKYNRLQGWCNAPLTASGLADADRAGHKLKGYDFAAAYCSDTSRAEITAKRILDINEAAGHA RPELTADMHFREQCYGYFEGQDMSLAWTAAGGPHGAKDYNDIVAKFGLAASRDFLKEADPFHDAESDEEYWTRVEGAFQL IASNPNLKDGDDVLQISHGNTLLSLGHRFGGPDLDLSERPANGSVTVLDFDTTKPFSQAVTIVSYGK
Sequences:
>Translated_227_residues MGTLILHLHLVRHGQTTFNKYNRLQGWCNAPLTASGLADADRAGHKLKGYDFAAAYCSDTSRAEITAKRILDINEAAGHA RPELTADMHFREQCYGYFEGQDMSLAWTAAGGPHGAKDYNDIVAKFGLAASRDFLKEADPFHDAESDEEYWTRVEGAFQL IASNPNLKDGDDVLQISHGNTLLSLGHRFGGPDLDLSERPANGSVTVLDFDTTKPFSQAVTIVSYGK >Mature_226_residues GTLILHLHLVRHGQTTFNKYNRLQGWCNAPLTASGLADADRAGHKLKGYDFAAAYCSDTSRAEITAKRILDINEAAGHAR PELTADMHFREQCYGYFEGQDMSLAWTAAGGPHGAKDYNDIVAKFGLAASRDFLKEADPFHDAESDEEYWTRVEGAFQLI ASNPNLKDGDDVLQISHGNTLLSLGHRFGGPDLDLSERPANGSVTVLDFDTTKPFSQAVTIVSYGK
Specific function: Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate [H]
COG id: COG0406
COG function: function code G; Fructose-2,6-bisphosphatase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: 960 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013078 - InterPro: IPR001345 - InterPro: IPR005952 [H]
Pfam domain/function: PF00300 PGAM [H]
EC number: =5.4.2.1 [H]
Molecular weight: Translated: 24851; Mature: 24720
Theoretical pI: Translated: 5.50; Mature: 5.50
Prosite motif: PS00175 PG_MUTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTLILHLHLVRHGQTTFNKYNRLQGWCNAPLTASGLADADRAGHKLKGYDFAAAYCSDT CCEEEEEEEEHHCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCEEEEEECCCC SRAEITAKRILDINEAAGHARPELTADMHFREQCYGYFEGQDMSLAWTAAGGPHGAKDYN CCHHHHHHHHHCCHHHCCCCCCCCCHHHHHHHHHCEEECCCCCEEEEEECCCCCCCCHHH DIVAKFGLAASRDFLKEADPFHDAESDEEYWTRVEGAFQLIASNPNLKDGDDVLQISHGN HHHHHHCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHEEEEECCCCCCCCCCEEEEECCC TLLSLGHRFGGPDLDLSERPANGSVTVLDFDTTKPFSQAVTIVSYGK EEEEHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCHHHEEEEEECCC >Mature Secondary Structure GTLILHLHLVRHGQTTFNKYNRLQGWCNAPLTASGLADADRAGHKLKGYDFAAAYCSDT CEEEEEEEEHHCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCEEEEEECCCC SRAEITAKRILDINEAAGHARPELTADMHFREQCYGYFEGQDMSLAWTAAGGPHGAKDYN CCHHHHHHHHHCCHHHCCCCCCCCCHHHHHHHHHCEEECCCCCEEEEEECCCCCCCCHHH DIVAKFGLAASRDFLKEADPFHDAESDEEYWTRVEGAFQLIASNPNLKDGDDVLQISHGN HHHHHHCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHEEEEECCCCCCCCCCEEEEECCC TLLSLGHRFGGPDLDLSERPANGSVTVLDFDTTKPFSQAVTIVSYGK EEEEHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCHHHEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA