| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692379
Identifier: 213692379
GI number: 213692379
Start: 1670693
End: 1671046
Strand: Direct
Name: 213692379
Synonym: Blon_1506
Alternate gene names: NA
Gene position: 1670693-1671046 (Clockwise)
Preceding gene: 213692378
Following gene: 213692380
Centisome position: 58.98
GC content: 57.06
Gene sequence:
>354_bases ATGGTTAGTTCTAACCCTTCGCGTGAGACGTGCCGTCTTGTGGATAGACGGGATGGCGAACGTTGCGTGAGATGCGGGGC GACATGGAATTGGGCTGGTTTCTCCCGTCATCACCGACATCTGAGAAGCCACCCGTTCCCCGGCCTGCACTTGCCATCGA ACCTGATCCTGCTGTGTGGAAGCGGTTCGAACGAGGGTTGCCATTTGTGGGTGCATACCCATCAGCGTGAGGCGATGGAA CAGGGGTGGATCGTCAGCGGTTTAAACGACCACCCCGAACAGGTGCCGGTACGAATCTACGGCAAGGGCCTTGTGCTCTT GGACAACATGGGAGGCTACACGTTATGCAGTTAG
Upstream 100 bases:
>100_bases TACCAGCAGTCCGCCCAACAGCTCAACCAGCAGTTCCAGCAGCCTCCTGTCGACCCTTGGAGCCAGCCGCAGGGCACTGC CTCTCAGGACGAGTTCGGCA
Downstream 100 bases:
>100_bases ACCCCATCGAACAACTCTACAAACTGTTCTGTCGTGAATCATCGTTCAGGCCAGCCTTATACAAGCTAGACCCGGTGTTG TTTCGCCGGTTCACGAACGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 117; Mature: 117
Protein sequence:
>117_residues MVSSNPSRETCRLVDRRDGERCVRCGATWNWAGFSRHHRHLRSHPFPGLHLPSNLILLCGSGSNEGCHLWVHTHQREAME QGWIVSGLNDHPEQVPVRIYGKGLVLLDNMGGYTLCS
Sequences:
>Translated_117_residues MVSSNPSRETCRLVDRRDGERCVRCGATWNWAGFSRHHRHLRSHPFPGLHLPSNLILLCGSGSNEGCHLWVHTHQREAME QGWIVSGLNDHPEQVPVRIYGKGLVLLDNMGGYTLCS >Mature_117_residues MVSSNPSRETCRLVDRRDGERCVRCGATWNWAGFSRHHRHLRSHPFPGLHLPSNLILLCGSGSNEGCHLWVHTHQREAME QGWIVSGLNDHPEQVPVRIYGKGLVLLDNMGGYTLCS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13197; Mature: 13197
Theoretical pI: Translated: 8.16; Mature: 8.16
Prosite motif: PS00028 ZINC_FINGER_C2H2_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 7.7 %Cys+Met (Translated Protein) 5.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 7.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSSNPSRETCRLVDRRDGERCVRCGATWNWAGFSRHHRHLRSHPFPGLHLPSNLILLCG CCCCCCCHHHHHHHCCCCCCCEEECCCCCCCCCCHHHHHHHHCCCCCCCCCCCCEEEEEE SGSNEGCHLWVHTHQREAMEQGWIVSGLNDHPEQVPVRIYGKGLVLLDNMGGYTLCS CCCCCCEEEEEECCHHHHHHCCCEEECCCCCCCCCCEEEECCCEEEEECCCCEEECC >Mature Secondary Structure MVSSNPSRETCRLVDRRDGERCVRCGATWNWAGFSRHHRHLRSHPFPGLHLPSNLILLCG CCCCCCCHHHHHHHCCCCCCCEEECCCCCCCCCCHHHHHHHHCCCCCCCCCCCCEEEEEE SGSNEGCHLWVHTHQREAMEQGWIVSGLNDHPEQVPVRIYGKGLVLLDNMGGYTLCS CCCCCCEEEEEECCHHHHHHCCCEEECCCCCCCCCCEEEECCCEEEEECCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA