Click here to switch to the map view.

The map label for this gene is ykrA [H]

Identifier: 213692348

GI number: 213692348

Start: 1637589

End: 1638434

Strand: Reverse

Name: ykrA [H]

Synonym: Blon_1475

Alternate gene names: 213692348

Gene position: 1638434-1637589 (Counterclockwise)

Preceding gene: 213692349

Following gene: 213692347

Centisome position: 57.84

GC content: 55.91

Gene sequence:

>846_bases
ATGACAACCAATAGCAAACTCGTATTCATCGATATCGACGGCACCCTAGCCGACGAAAACCACGTCGTACCCGAATCTGC
CAAAATCGCTTGCAAACAAGCCCAGGCCAACGGCCACAAGCTCTTCATCTGTACCGGTCGCTCCATGCCAAAAATCGAAC
GCAGCATTCTGGATCTTGGATTCGACGGTGTAGTTTCCGTAGCCGGCGCGCAGGCGAATATTGGCGATAAGCTGCTGTTC
CAGCACCTCATATCGCCCGAGGCAATTGATGCGGCGATGGCGTATTTCGCCGAGCATCATATCGAAAGCTACCAATGGCA
GGGTGCGGACGGCATGTACATTTCCGAAGGTTATCGCCGCCATCTGGAGTCCAAGGGCAAGACGTGGAATCGTGGTGAGT
TTGCGCGGTTCTGGCATCTGCTGGACGAGGTCGAGGTTCCGGCCGGCTCCACGTTGGGACATACGATTCATGTGAGCAAG
GGGTCATACTTCACCTCGCCGAATCCTGACGTGACTTTCGAGGAGACTCAACGTGATTTGAGCCCATGGTTTGAGCTCGT
GCACGGCTCATACGACAAGATCTCGCCGAATAACGGCGAACTGCTCATCAACGGCATCGACAAAGGTACCGCTGTGCGCG
ACGTGGCTTCTTTGCTGGGCTATGCCATTGCCGACACCATCACCATCGGCGACTCCGACAACGACACCGCCATGCTCAAA
GCCGCCGGCACATCCGTAGCCATGGGCAACGCCATTCATGGCATCCAAGCCTTCTGCGACTTCACCACCACCGACATTCA
CGAGGACGGCCTGGCCAACGCCTTCAAAACGTTGGGACTGGTGTGA

Upstream 100 bases:

>100_bases
GATGCTTGTAGGTTTTTAGGCGGGATTTTCTTCGCCCCCCTCTGGAGGAGCTGTCAGCGTAAGCTGACTGGGGGAGGTCC
AACCAGTTACGAAGGCAACC

Downstream 100 bases:

>100_bases
GGCTATGTCGTTTGCTCTCAGACGGAGGATCCTTCCGTGCTGTAGTAGTGAGAAATAAGTTGAATATATACTGAACGGGG
AAGGAGGGAACGATCTTATG

Product: Cof-like hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 281; Mature: 280

Protein sequence:

>281_residues
MTTNSKLVFIDIDGTLADENHVVPESAKIACKQAQANGHKLFICTGRSMPKIERSILDLGFDGVVSVAGAQANIGDKLLF
QHLISPEAIDAAMAYFAEHHIESYQWQGADGMYISEGYRRHLESKGKTWNRGEFARFWHLLDEVEVPAGSTLGHTIHVSK
GSYFTSPNPDVTFEETQRDLSPWFELVHGSYDKISPNNGELLINGIDKGTAVRDVASLLGYAIADTITIGDSDNDTAMLK
AAGTSVAMGNAIHGIQAFCDFTTTDIHEDGLANAFKTLGLV

Sequences:

>Translated_281_residues
MTTNSKLVFIDIDGTLADENHVVPESAKIACKQAQANGHKLFICTGRSMPKIERSILDLGFDGVVSVAGAQANIGDKLLF
QHLISPEAIDAAMAYFAEHHIESYQWQGADGMYISEGYRRHLESKGKTWNRGEFARFWHLLDEVEVPAGSTLGHTIHVSK
GSYFTSPNPDVTFEETQRDLSPWFELVHGSYDKISPNNGELLINGIDKGTAVRDVASLLGYAIADTITIGDSDNDTAMLK
AAGTSVAMGNAIHGIQAFCDFTTTDIHEDGLANAFKTLGLV
>Mature_280_residues
TTNSKLVFIDIDGTLADENHVVPESAKIACKQAQANGHKLFICTGRSMPKIERSILDLGFDGVVSVAGAQANIGDKLLFQ
HLISPEAIDAAMAYFAEHHIESYQWQGADGMYISEGYRRHLESKGKTWNRGEFARFWHLLDEVEVPAGSTLGHTIHVSKG
SYFTSPNPDVTFEETQRDLSPWFELVHGSYDKISPNNGELLINGIDKGTAVRDVASLLGYAIADTITIGDSDNDTAMLKA
AGTSVAMGNAIHGIQAFCDFTTTDIHEDGLANAFKTLGLV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]

Homologues:

Organism=Escherichia coli, GI2367265, Length=88, Percent_Identity=38.6363636363636, Blast_Score=62, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006379
- InterPro:   IPR000150 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 30532; Mature: 30401

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: PS01229 COF_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTNSKLVFIDIDGTLADENHVVPESAKIACKQAQANGHKLFICTGRSMPKIERSILDLG
CCCCCEEEEEEECCEECCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHCC
FDGVVSVAGAQANIGDKLLFQHLISPEAIDAAMAYFAEHHIESYQWQGADGMYISEGYRR
CCHHHEECCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCEECCCCCCEEHHHHHH
HLESKGKTWNRGEFARFWHLLDEVEVPAGSTLGHTIHVSKGSYFTSPNPDVTFEETQRDL
HHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCEECCCCCCEEHHHHHHHH
SPWFELVHGSYDKISPNNGELLINGIDKGTAVRDVASLLGYAIADTITIGDSDNDTAMLK
HHHHHHHCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHEEEECCCCCCEEEEE
AAGTSVAMGNAIHGIQAFCDFTTTDIHEDGLANAFKTLGLV
ECCCCEECCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCC
>Mature Secondary Structure 
TTNSKLVFIDIDGTLADENHVVPESAKIACKQAQANGHKLFICTGRSMPKIERSILDLG
CCCCEEEEEEECCEECCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHCC
FDGVVSVAGAQANIGDKLLFQHLISPEAIDAAMAYFAEHHIESYQWQGADGMYISEGYRR
CCHHHEECCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCEECCCCCCEEHHHHHH
HLESKGKTWNRGEFARFWHLLDEVEVPAGSTLGHTIHVSKGSYFTSPNPDVTFEETQRDL
HHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCEECCCCCCEEHHHHHHHH
SPWFELVHGSYDKISPNNGELLINGIDKGTAVRDVASLLGYAIADTITIGDSDNDTAMLK
HHHHHHHCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHEEEECCCCCCEEEEE
AAGTSVAMGNAIHGIQAFCDFTTTDIHEDGLANAFKTLGLV
ECCCCEECCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]