| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is cbh [H]
Identifier: 213692328
GI number: 213692328
Start: 1614024
End: 1614977
Strand: Reverse
Name: cbh [H]
Synonym: Blon_1453
Alternate gene names: 213692328
Gene position: 1614977-1614024 (Counterclockwise)
Preceding gene: 213692329
Following gene: 213692327
Centisome position: 57.01
GC content: 59.64
Gene sequence:
>954_bases ATGTGCACTGGTGTCCGTTTCTCCGATGATGAGGGCAACACCTATTTCGGCCGTAATCTCGACTGGAGTTTCTCATATGG GGAGACCATCCTGGTCACTCCGTGCGGCTACCACTATGACACGGTGTTCGGTGCGAGCGGCAAGGCGAAGCCGAACGCGG TGATCGGCGTGGGCGTGGTCATGGCCGATAGGCCGATGTATTTCGACTGCGCCAACGAACATGGTCTGGCCATCGCCGGC TTGAATTTCCCTGGTTACGCCTCGTTCGTCCACGAACCGGTCGAAGGCACGGAGAACGTCGCCACGTTCGAATTCCCGCT GTGGGTGGCGCGTAATTTCGACTCCGTCGACGAGGTCGAGGAGGCGCTCAGGAACGTGACGCTCGTCTCCCAGATCGTGC CGGGACAGCAGGAGTCGCTGCTGCACTGGTTCATCGGCGACGGCAAACGCAGCATCGTCGTCGAGCAGATGGCCGATGGC ATGCATGTGCATCATGATGACGTCGATGTGCTGACCAATCAGCCGACGTTCGACTTCCATATGGAGAATCTGCGCAACTA CATGTGCGTCAGCAACGAGATGGCCGAACCGACTTCATGGGGCAAGGCCTCCTTGACCGCCTGGGGTGCGGGTGTGGGCA TGCATGGCATCCCGGGCGACGTGAGCTCCCCGTCCCGCTTCGTTCGTGTGGCCTACACCAACGCGCATTACCCGCAGCAG AACGATGAAGCCGCCAATGTGTCGCGCCTGTTCCACACCCTCGGCTCCGTGCAGATGGTGGACGGCATGGCGAAGATGGG CAACGGCCAGTTCGAACGCACGCTGTTCACCAGCGGATACTCGTCCAAGACCAACACCTATTACATGAACACCTATGATG ATCCCGCCATCCGTTCCTACGCCATGGCCGATTACGATATGGATTCCTCGGAGCTCATCAGCGTCGCCCGATGA
Upstream 100 bases:
>100_bases GCGCCGCACGTTAACCTGCTGGCGAAACCCAGAGTTCACCCAGCGGCCGATGGGTATCATGAACGTGCAAGCCAACCAAA GCGATGGAAGGAAGTCCGTT
Downstream 100 bases:
>100_bases CTCCTTCCCGGCTCATGCCCCATTCGGAAGGGCATGAGCGTATATAGTGGAATCTTATGGAATCGTCGATGTTCAAACCC AGCTCCATGGACCTCATCAG
Product: Choloylglycine hydrolase
Products: NA
Alternate protein names: Bile salt hydrolase; Conjugated bile acid hydrolase; CBAH [H]
Number of amino acids: Translated: 317; Mature: 317
Protein sequence:
>317_residues MCTGVRFSDDEGNTYFGRNLDWSFSYGETILVTPCGYHYDTVFGASGKAKPNAVIGVGVVMADRPMYFDCANEHGLAIAG LNFPGYASFVHEPVEGTENVATFEFPLWVARNFDSVDEVEEALRNVTLVSQIVPGQQESLLHWFIGDGKRSIVVEQMADG MHVHHDDVDVLTNQPTFDFHMENLRNYMCVSNEMAEPTSWGKASLTAWGAGVGMHGIPGDVSSPSRFVRVAYTNAHYPQQ NDEAANVSRLFHTLGSVQMVDGMAKMGNGQFERTLFTSGYSSKTNTYYMNTYDDPAIRSYAMADYDMDSSELISVAR
Sequences:
>Translated_317_residues MCTGVRFSDDEGNTYFGRNLDWSFSYGETILVTPCGYHYDTVFGASGKAKPNAVIGVGVVMADRPMYFDCANEHGLAIAG LNFPGYASFVHEPVEGTENVATFEFPLWVARNFDSVDEVEEALRNVTLVSQIVPGQQESLLHWFIGDGKRSIVVEQMADG MHVHHDDVDVLTNQPTFDFHMENLRNYMCVSNEMAEPTSWGKASLTAWGAGVGMHGIPGDVSSPSRFVRVAYTNAHYPQQ NDEAANVSRLFHTLGSVQMVDGMAKMGNGQFERTLFTSGYSSKTNTYYMNTYDDPAIRSYAMADYDMDSSELISVAR >Mature_317_residues MCTGVRFSDDEGNTYFGRNLDWSFSYGETILVTPCGYHYDTVFGASGKAKPNAVIGVGVVMADRPMYFDCANEHGLAIAG LNFPGYASFVHEPVEGTENVATFEFPLWVARNFDSVDEVEEALRNVTLVSQIVPGQQESLLHWFIGDGKRSIVVEQMADG MHVHHDDVDVLTNQPTFDFHMENLRNYMCVSNEMAEPTSWGKASLTAWGAGVGMHGIPGDVSSPSRFVRVAYTNAHYPQQ NDEAANVSRLFHTLGSVQMVDGMAKMGNGQFERTLFTSGYSSKTNTYYMNTYDDPAIRSYAMADYDMDSSELISVAR
Specific function: The enzyme catalyzes the degradation of conjugated bile acids in the mammalian gut [H]
COG id: COG3049
COG function: function code M; Penicillin V acylase and related amidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase C59 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003199 [H]
Pfam domain/function: PF02275 CBAH [H]
EC number: =3.5.1.24 [H]
Molecular weight: Translated: 35101; Mature: 35101
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCTGVRFSDDEGNTYFGRNLDWSFSYGETILVTPCGYHYDTVFGASGKAKPNAVIGVGVV CCCCCEEECCCCCEEECCCCCEEECCCCEEEEEECCCCCCEEECCCCCCCCCEEEEEEEE MADRPMYFDCANEHGLAIAGLNFPGYASFVHEPVEGTENVATFEFPLWVARNFDSVDEVE EECCCEEEECCCCCCEEEEECCCCCHHHHHHCCCCCCCCEEEEEECEEEECCCCCHHHHH EALRNVTLVSQIVPGQQESLLHWFIGDGKRSIVVEQMADGMHVHHDDVDVLTNQPTFDFH HHHHHHHHHHHHCCCCHHCEEEEEECCCCCEEEHHHHHCCCEEECCCCEEEECCCCCHHH MENLRNYMCVSNEMAEPTSWGKASLTAWGAGVGMHGIPGDVSSPSRFVRVAYTNAHYPQQ HHHHHHEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEEEECCCCCCC NDEAANVSRLFHTLGSVQMVDGMAKMGNGQFERTLFTSGYSSKTNTYYMNTYDDPAIRSY CCCHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCEEEEECCCCHHHHHE AMADYDMDSSELISVAR EEECCCCCHHHHHEECC >Mature Secondary Structure MCTGVRFSDDEGNTYFGRNLDWSFSYGETILVTPCGYHYDTVFGASGKAKPNAVIGVGVV CCCCCEEECCCCCEEECCCCCEEECCCCEEEEEECCCCCCEEECCCCCCCCCEEEEEEEE MADRPMYFDCANEHGLAIAGLNFPGYASFVHEPVEGTENVATFEFPLWVARNFDSVDEVE EECCCEEEECCCCCCEEEEECCCCCHHHHHHCCCCCCCCEEEEEECEEEECCCCCHHHHH EALRNVTLVSQIVPGQQESLLHWFIGDGKRSIVVEQMADGMHVHHDDVDVLTNQPTFDFH HHHHHHHHHHHHCCCCHHCEEEEEECCCCCEEEHHHHHCCCEEECCCCEEEECCCCCHHH MENLRNYMCVSNEMAEPTSWGKASLTAWGAGVGMHGIPGDVSSPSRFVRVAYTNAHYPQQ HHHHHHEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEEEECCCCCCC NDEAANVSRLFHTLGSVQMVDGMAKMGNGQFERTLFTSGYSSKTNTYYMNTYDDPAIRSY CCCHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCEEEEECCCCHHHHHE AMADYDMDSSELISVAR EEECCCCCHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7618863; 11792842 [H]