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The map label for this gene is pyrF [H]

Identifier: 213692323

GI number: 213692323

Start: 1606561

End: 1607514

Strand: Reverse

Name: pyrF [H]

Synonym: Blon_1448

Alternate gene names: 213692323

Gene position: 1607514-1606561 (Counterclockwise)

Preceding gene: 213692324

Following gene: 213692322

Centisome position: 56.75

GC content: 66.25

Gene sequence:

>954_bases
ATGGATCGCCTGATCGAAGCGATTGACAACACTCAGAACCCCAGCGTCGTGGGCCTCGACCCCACCGAGGCGTTGGTACC
GCCGCAGGTCGTGGCGAGCTTTGCCGACGAGGTGCGTGACTCGGTCGAATCCCCGGAGGAAATCGAATCCGCGCAGCTGG
CCGTCGCCTACTTCGAATACAACCGCACGATCATCGACGCCATCGCCGACATCGTGCCCGCCGTCAAACCGCAGATCGCC
ATGTACGAGGCGCTCGGCCCCGCCGGCGTGGACATCTACACGATGACCTGCGAATACGCGGCCCAGCAAGGCCTCTACGT
GCTCGGCGACATCAAACGCGGCGACATCGGCTCCACTGCAGCCGCCTACGCCCACCACCTGAACGGCGTAGGCGACTTCG
ACCCGTGGCATGAGGATGCGGTGACCGTCAACCCGTACCTCGGCACCGACGGCATCACCCCGTTCGTCAAGGCCGCCGCC
GAAGCCGACAAGGACATCTTCGTGCTCGTGCGCACCTCCAACCCGTCCTCCAGCGAACTGCAGATGCTCGACCTGGCCGA
CGGCACGAAGGTCTACGAGCACGTGGCCGATCTCGTGGAAGGATGGGGTGCCGAGACCATCGGCAGCCATGGCTACTCCC
GCGTGGGCGCGGTGGTCGGCGCCACCCACCCCGAGGAAGGCAAGGCGCTGCGCGAACGCATGCCGCACACGTTCTTCCTC
GTGCCGGGCTACGGCGCGCAGGGCGGCACGGCCGCGGACGTGGCAGGCATGTTCGACAAGCAGGGCAGCGGCGCCATCGT
CAACTCGTCGCGCGGCATCATCGGCGCATGGAAGAAGAGCGGCAAGTACTCCGAATCCATGACCGCCGACGAGGCGCTGG
ACCTTGTGGCGAGCAGCGCGCGCCAGGCGGCGCTCGGCATGCGCGATAATCTGCGGGTTGCCGTATATAGGTAG

Upstream 100 bases:

>100_bases
ACACCCCGTTTGGCGGCTGGCAGGTCACCGGACGCCCCCTCGCCACGATCATCGGCTCCCAGCTGATGTTCAGCCGTCTG
TAGATAACATAAGGAGCAGC

Downstream 100 bases:

>100_bases
GTAGATTGTCCGGCTGTGGGCTATACGTGAGTGTGGGCTGGAAACCGGAGCCGAGTGTGTTTAACTCCCCCTCAGTCAAC
CTGCGGTTGACAGCTTCCCT

Product: orotidine 5'-phosphate decarboxylase

Products: NA

Alternate protein names: OMP decarboxylase; OMPDCase; OMPdecase [H]

Number of amino acids: Translated: 317; Mature: 317

Protein sequence:

>317_residues
MDRLIEAIDNTQNPSVVGLDPTEALVPPQVVASFADEVRDSVESPEEIESAQLAVAYFEYNRTIIDAIADIVPAVKPQIA
MYEALGPAGVDIYTMTCEYAAQQGLYVLGDIKRGDIGSTAAAYAHHLNGVGDFDPWHEDAVTVNPYLGTDGITPFVKAAA
EADKDIFVLVRTSNPSSSELQMLDLADGTKVYEHVADLVEGWGAETIGSHGYSRVGAVVGATHPEEGKALRERMPHTFFL
VPGYGAQGGTAADVAGMFDKQGSGAIVNSSRGIIGAWKKSGKYSESMTADEALDLVASSARQAALGMRDNLRVAVYR

Sequences:

>Translated_317_residues
MDRLIEAIDNTQNPSVVGLDPTEALVPPQVVASFADEVRDSVESPEEIESAQLAVAYFEYNRTIIDAIADIVPAVKPQIA
MYEALGPAGVDIYTMTCEYAAQQGLYVLGDIKRGDIGSTAAAYAHHLNGVGDFDPWHEDAVTVNPYLGTDGITPFVKAAA
EADKDIFVLVRTSNPSSSELQMLDLADGTKVYEHVADLVEGWGAETIGSHGYSRVGAVVGATHPEEGKALRERMPHTFFL
VPGYGAQGGTAADVAGMFDKQGSGAIVNSSRGIIGAWKKSGKYSESMTADEALDLVASSARQAALGMRDNLRVAVYR
>Mature_317_residues
MDRLIEAIDNTQNPSVVGLDPTEALVPPQVVASFADEVRDSVESPEEIESAQLAVAYFEYNRTIIDAIADIVPAVKPQIA
MYEALGPAGVDIYTMTCEYAAQQGLYVLGDIKRGDIGSTAAAYAHHLNGVGDFDPWHEDAVTVNPYLGTDGITPFVKAAA
EADKDIFVLVRTSNPSSSELQMLDLADGTKVYEHVADLVEGWGAETIGSHGYSRVGAVVGATHPEEGKALRERMPHTFFL
VPGYGAQGGTAADVAGMFDKQGSGAIVNSSRGIIGAWKKSGKYSESMTADEALDLVASSARQAALGMRDNLRVAVYR

Specific function: Unknown

COG id: COG0284

COG function: function code F; Orotidine-5'-phosphate decarboxylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OMP decarboxylase family. Type 2 subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR011995
- InterPro:   IPR001754
- InterPro:   IPR011060 [H]

Pfam domain/function: PF00215 OMPdecase [H]

EC number: =4.1.1.23 [H]

Molecular weight: Translated: 33713; Mature: 33713

Theoretical pI: Translated: 4.30; Mature: 4.30

Prosite motif: PS00156 OMPDECASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRLIEAIDNTQNPSVVGLDPTEALVPPQVVASFADEVRDSVESPEEIESAQLAVAYFEY
CCHHHHHHCCCCCCCEEECCCHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHEEEEEEHH
NRTIIDAIADIVPAVKPQIAMYEALGPAGVDIYTMTCEYAAQQGLYVLGDIKRGDIGSTA
CHHHHHHHHHHHHHCCCHHHHHHHCCCCCCEEEEEEEHHHHHCCEEEEEECCCCCCCCHH
AAYAHHLNGVGDFDPWHEDAVTVNPYLGTDGITPFVKAAAEADKDIFVLVRTSNPSSSEL
HHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHCCCCCEEEEEECCCCCCCCE
QMLDLADGTKVYEHVADLVEGWGAETIGSHGYSRVGAVVGATHPEEGKALRERMPHTFFL
EEEECCCCHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHCCCCCHHHHHHHHHCCCEEEE
VPGYGAQGGTAADVAGMFDKQGSGAIVNSSRGIIGAWKKSGKYSESMTADEALDLVASSA
ECCCCCCCCCHHHHHHHHCCCCCCEEEECCCCEEEECCCCCCCCHHCCHHHHHHHHHHHH
RQAALGMRDNLRVAVYR
HHHHCCCCCCCEEEEEC
>Mature Secondary Structure
MDRLIEAIDNTQNPSVVGLDPTEALVPPQVVASFADEVRDSVESPEEIESAQLAVAYFEY
CCHHHHHHCCCCCCCEEECCCHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHEEEEEEHH
NRTIIDAIADIVPAVKPQIAMYEALGPAGVDIYTMTCEYAAQQGLYVLGDIKRGDIGSTA
CHHHHHHHHHHHHHCCCHHHHHHHCCCCCCEEEEEEEHHHHHCCEEEEEECCCCCCCCHH
AAYAHHLNGVGDFDPWHEDAVTVNPYLGTDGITPFVKAAAEADKDIFVLVRTSNPSSSEL
HHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHCCCCCEEEEEECCCCCCCCE
QMLDLADGTKVYEHVADLVEGWGAETIGSHGYSRVGAVVGATHPEEGKALRERMPHTFFL
EEEECCCCHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHCCCCCHHHHHHHHHCCCEEEE
VPGYGAQGGTAADVAGMFDKQGSGAIVNSSRGIIGAWKKSGKYSESMTADEALDLVASSA
ECCCCCCCCCHHHHHHHHCCCCCCEEEECCCCEEEECCCCCCCCHHCCHHHHHHHHHHHH
RQAALGMRDNLRVAVYR
HHHHCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA