| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is yjeF [C]
Identifier: 213692316
GI number: 213692316
Start: 1597782
End: 1599545
Strand: Direct
Name: yjeF [C]
Synonym: Blon_1440
Alternate gene names: 213692316
Gene position: 1597782-1599545 (Clockwise)
Preceding gene: 213692315
Following gene: 213692317
Centisome position: 56.4
GC content: 67.57
Gene sequence:
>1764_bases ATGGAATACACCGAAGACGCCGATCGTCGCGAACTGCTACTGCACAGCGCCTATGACTCCGATACGGTCCGAGCCATGGA GCGACCCCTGCTGGACAAAGGCGTGCCGCTGATGCGCATGGCCGCCCAGGCCGCGGCCCACATGGCGGCCGGTATGCTGG ACGACGAGGATCTGGCGCTGGAGGACACGTCGATCGTGCTGCTGGCCGGGGCCGGAGACAATGGTGGCGATGGTCTGTTC GCGGCCGCCGCGCTGGCCCAGGAGGGCGCGAACGTCACCGCCATCGCCGTGGGCCGGTCGTTGCATGAGGCCGGACTCGC CTCGTTCGTGCGCGCCGGAGGCAAGGTGCTGGTGCTTGATCCCGCGGCTGATATTCCCGGTTGCGCGTCCGGGTTTTCCG CCGGTGAGGCCGGCGAGCGACTGCAGACCGCCATCGTCGTGGCCAGGAAATCACATCTGATCATCGACGCGATGACCGGC ATCGGCATCCAAGGCTCGCTACGCGGCATTCCCGCCGCACTCGCCTCCGCCCTTGGTCTCGACGGCGAGGCTCCCGATGA GCCCGCCTTGCCGAACCGTGAGTCGTCAGGCGATTTTCCGCTGGTACTTGCTGTGGATACGCCATCCGGCGTCGGTGTGA ACGATGGTTCTCTGCCCGGCCCGTACATTCCGGCCACGGTCACGGTCACGTTCGGCGCGATGAAGCCGTGCGCGGTGCTG CCGCCCGCCACGTTCGCCTGCGGCCGTATCGAGTTGTTCGATTTCGGATTCGATATCGACGACAAGGATCCGGACGTCGA GGTGGTGGATAATTCGTTCGCGTCCGACGCGGTCCGTCTCCCCCGGTTCGAGGATTCCAAATACTCCCGGGGCGTGGTTG GTCTGGTGACCGGCTCGCAGCGCTACCCCGGTGCCGCCGTGCTCACCACCAGCGCCGCCGCCCGCGCGAACACCGGCATG GTCCGGTATCTGGGCCCGGAGCGCGCGCAGAACATGGTGCTCACCGCACTGCCGGAAGCCGTGATCGGCAAGGGACATGT GCAGTCCTGGGTCGTGGGGTCCGGCGTGCCCGAGGCTAGCGTCGAGGACGCCGACGGCGATATGCAGCGGGACACCATCG CCGCATTGCTCAAGCATTACACGCTCGGCAGCGAGGATGAGAACAAGGACGCCTACGACATGCCGCCAATCGTGGTGGAT GCCGGCGCACTTGACCTGCTGCCGGAGCGTGTGCCCGGCCAGGTGGTGATCACGCCACATGCCGGCGAGATGGCGAAACT GCTCAACCGGTTCGAAATCGCCGCCAGCACCGCGGAGCATGCCGATTCGCACGAGCCATACACCGCCGACGACGTGCGGT TGAACCCGTTGGCCAGCGCGAAGCGCGCCCACGAGCTCACCGGCGCCACCGTATTGCTGAAGGGCGCGGTGACCATCGTG GTGGATGAGGACCACGTCTATGCGTCGGGCAGCGCGCCGGCCTGGCTGGGCACCGCCGGCGCGGGCGACGTGCTGGCCGG TCTGACCGGCGCCCTGCTCGCCCAGCAGGATGACATGGCCACCACGGCCGAGACCGTGGCCTCGGCCGCATACCTGCATG GCCTGGCGGCGGCGATCGCCTCCGAATCCGAGCAGCAGGGCTGGCAGGAGCCGGAACTGATCGGCCGCGAGCATCGCCAG CGCTTCATGACGCTCGGCCACCCGATCGTGGCCGGCGACGTGGCCCACGCCATTCCCGAAGCCATCGCCGACGTCATCTC ATAA
Upstream 100 bases:
>100_bases GAAGGTCAAGCGCTCGATCCCCGTGCTCGAAAAGTTCGCCCACGAGGTGTACGGCCTGTAAACACGGACCGCAAGTAACA AACACAGGAAAGGGGTTGCC
Downstream 100 bases:
>100_bases CCTTGTTGACCTCCCTCTGACGAGGGAGGTGTCTCGGCAAAACCAAGACGGAGGGAGAGAAACATAAGCCTCAAACTCCA CATACCCCAACCTATACACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 587; Mature: 587
Protein sequence:
>587_residues MEYTEDADRRELLLHSAYDSDTVRAMERPLLDKGVPLMRMAAQAAAHMAAGMLDDEDLALEDTSIVLLAGAGDNGGDGLF AAAALAQEGANVTAIAVGRSLHEAGLASFVRAGGKVLVLDPAADIPGCASGFSAGEAGERLQTAIVVARKSHLIIDAMTG IGIQGSLRGIPAALASALGLDGEAPDEPALPNRESSGDFPLVLAVDTPSGVGVNDGSLPGPYIPATVTVTFGAMKPCAVL PPATFACGRIELFDFGFDIDDKDPDVEVVDNSFASDAVRLPRFEDSKYSRGVVGLVTGSQRYPGAAVLTTSAAARANTGM VRYLGPERAQNMVLTALPEAVIGKGHVQSWVVGSGVPEASVEDADGDMQRDTIAALLKHYTLGSEDENKDAYDMPPIVVD AGALDLLPERVPGQVVITPHAGEMAKLLNRFEIAASTAEHADSHEPYTADDVRLNPLASAKRAHELTGATVLLKGAVTIV VDEDHVYASGSAPAWLGTAGAGDVLAGLTGALLAQQDDMATTAETVASAAYLHGLAAAIASESEQQGWQEPELIGREHRQ RFMTLGHPIVAGDVAHAIPEAIADVIS
Sequences:
>Translated_587_residues MEYTEDADRRELLLHSAYDSDTVRAMERPLLDKGVPLMRMAAQAAAHMAAGMLDDEDLALEDTSIVLLAGAGDNGGDGLF AAAALAQEGANVTAIAVGRSLHEAGLASFVRAGGKVLVLDPAADIPGCASGFSAGEAGERLQTAIVVARKSHLIIDAMTG IGIQGSLRGIPAALASALGLDGEAPDEPALPNRESSGDFPLVLAVDTPSGVGVNDGSLPGPYIPATVTVTFGAMKPCAVL PPATFACGRIELFDFGFDIDDKDPDVEVVDNSFASDAVRLPRFEDSKYSRGVVGLVTGSQRYPGAAVLTTSAAARANTGM VRYLGPERAQNMVLTALPEAVIGKGHVQSWVVGSGVPEASVEDADGDMQRDTIAALLKHYTLGSEDENKDAYDMPPIVVD AGALDLLPERVPGQVVITPHAGEMAKLLNRFEIAASTAEHADSHEPYTADDVRLNPLASAKRAHELTGATVLLKGAVTIV VDEDHVYASGSAPAWLGTAGAGDVLAGLTGALLAQQDDMATTAETVASAAYLHGLAAAIASESEQQGWQEPELIGREHRQ RFMTLGHPIVAGDVAHAIPEAIADVIS >Mature_587_residues MEYTEDADRRELLLHSAYDSDTVRAMERPLLDKGVPLMRMAAQAAAHMAAGMLDDEDLALEDTSIVLLAGAGDNGGDGLF AAAALAQEGANVTAIAVGRSLHEAGLASFVRAGGKVLVLDPAADIPGCASGFSAGEAGERLQTAIVVARKSHLIIDAMTG IGIQGSLRGIPAALASALGLDGEAPDEPALPNRESSGDFPLVLAVDTPSGVGVNDGSLPGPYIPATVTVTFGAMKPCAVL PPATFACGRIELFDFGFDIDDKDPDVEVVDNSFASDAVRLPRFEDSKYSRGVVGLVTGSQRYPGAAVLTTSAAARANTGM VRYLGPERAQNMVLTALPEAVIGKGHVQSWVVGSGVPEASVEDADGDMQRDTIAALLKHYTLGSEDENKDAYDMPPIVVD AGALDLLPERVPGQVVITPHAGEMAKLLNRFEIAASTAEHADSHEPYTADDVRLNPLASAKRAHELTGATVLLKGAVTIV VDEDHVYASGSAPAWLGTAGAGDVLAGLTGALLAQQDDMATTAETVASAAYLHGLAAAIASESEQQGWQEPELIGREHRQ RFMTLGHPIVAGDVAHAIPEAIADVIS
Specific function: Unknown
COG id: COG0063
COG function: function code G; Predicted sugar kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 YjeF N-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI1790609, Length=521, Percent_Identity=28.0230326295585, Blast_Score=101, Evalue=1e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017953 - InterPro: IPR000631 - InterPro: IPR004443 [H]
Pfam domain/function: PF01256 Carb_kinase; PF03853 YjeF_N [H]
EC number: NA
Molecular weight: Translated: 60763; Mature: 60763
Theoretical pI: Translated: 4.26; Mature: 4.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEYTEDADRRELLLHSAYDSDTVRAMERPLLDKGVPLMRMAAQAAAHMAAGMLDDEDLAL CCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCEE EDTSIVLLAGAGDNGGDGLFAAAALAQEGANVTAIAVGRSLHEAGLASFVRAGGKVLVLD ECCEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCCEEEEEC PAADIPGCASGFSAGEAGERLQTAIVVARKSHLIIDAMTGIGIQGSLRGIPAALASALGL CCCCCCCCCCCCCCCCHHHHHHHHHEEEECCEEEEEECCCCCCCCCCCCHHHHHHHHHCC DGEAPDEPALPNRESSGDFPLVLAVDTPSGVGVNDGSLPGPYIPATVTVTFGAMKPCAVL CCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCC PPATFACGRIELFDFGFDIDDKDPDVEVVDNSFASDAVRLPRFEDSKYSRGVVGLVTGSQ CCCCCCCCEEEEEEECCCCCCCCCCCEEECCCCCCCCEECCCCCCCCCCCCEEEEEECCC RYPGAAVLTTSAAARANTGMVRYLGPERAQNMVLTALPEAVIGKGHVQSWVVGSGVPEAS CCCCEEEEECCHHHHCCCCEEEECCHHHHHCHHHHHCCHHHHCCCCHHEEEECCCCCCCC VEDADGDMQRDTIAALLKHYTLGSEDENKDAYDMPPIVVDAGALDLLPERVPGQVVITPH CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCHHHHCCCCCCCCEEEECC AGEMAKLLNRFEIAASTAEHADSHEPYTADDVRLNPLASAKRAHELTGATVLLKGAVTIV CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCHHHHHHHHHHCCCEEEEECEEEEE VDEDHVYASGSAPAWLGTAGAGDVLAGLTGALLAQQDDMATTAETVASAAYLHGLAAAIA EECCEEEECCCCCCEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH SESEQQGWQEPELIGREHRQRFMTLGHPIVAGDVAHAIPEAIADVIS CCHHHCCCCCHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHC >Mature Secondary Structure MEYTEDADRRELLLHSAYDSDTVRAMERPLLDKGVPLMRMAAQAAAHMAAGMLDDEDLAL CCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCEE EDTSIVLLAGAGDNGGDGLFAAAALAQEGANVTAIAVGRSLHEAGLASFVRAGGKVLVLD ECCEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCCEEEEEC PAADIPGCASGFSAGEAGERLQTAIVVARKSHLIIDAMTGIGIQGSLRGIPAALASALGL CCCCCCCCCCCCCCCCHHHHHHHHHEEEECCEEEEEECCCCCCCCCCCCHHHHHHHHHCC DGEAPDEPALPNRESSGDFPLVLAVDTPSGVGVNDGSLPGPYIPATVTVTFGAMKPCAVL CCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCC PPATFACGRIELFDFGFDIDDKDPDVEVVDNSFASDAVRLPRFEDSKYSRGVVGLVTGSQ CCCCCCCCEEEEEEECCCCCCCCCCCEEECCCCCCCCEECCCCCCCCCCCCEEEEEECCC RYPGAAVLTTSAAARANTGMVRYLGPERAQNMVLTALPEAVIGKGHVQSWVVGSGVPEAS CCCCEEEEECCHHHHCCCCEEEECCHHHHHCHHHHHCCHHHHCCCCHHEEEECCCCCCCC VEDADGDMQRDTIAALLKHYTLGSEDENKDAYDMPPIVVDAGALDLLPERVPGQVVITPH CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCHHHHCCCCCCCCEEEECC AGEMAKLLNRFEIAASTAEHADSHEPYTADDVRLNPLASAKRAHELTGATVLLKGAVTIV CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCHHHHHHHHHHCCCEEEEECEEEEE VDEDHVYASGSAPAWLGTAGAGDVLAGLTGALLAQQDDMATTAETVASAAYLHGLAAAIA EECCEEEECCCCCCEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH SESEQQGWQEPELIGREHRQRFMTLGHPIVAGDVAHAIPEAIADVIS CCHHHCCCCCHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]