Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

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The map label for this gene is yjeF [C]

Identifier: 213692316

GI number: 213692316

Start: 1597782

End: 1599545

Strand: Direct

Name: yjeF [C]

Synonym: Blon_1440

Alternate gene names: 213692316

Gene position: 1597782-1599545 (Clockwise)

Preceding gene: 213692315

Following gene: 213692317

Centisome position: 56.4

GC content: 67.57

Gene sequence:

>1764_bases
ATGGAATACACCGAAGACGCCGATCGTCGCGAACTGCTACTGCACAGCGCCTATGACTCCGATACGGTCCGAGCCATGGA
GCGACCCCTGCTGGACAAAGGCGTGCCGCTGATGCGCATGGCCGCCCAGGCCGCGGCCCACATGGCGGCCGGTATGCTGG
ACGACGAGGATCTGGCGCTGGAGGACACGTCGATCGTGCTGCTGGCCGGGGCCGGAGACAATGGTGGCGATGGTCTGTTC
GCGGCCGCCGCGCTGGCCCAGGAGGGCGCGAACGTCACCGCCATCGCCGTGGGCCGGTCGTTGCATGAGGCCGGACTCGC
CTCGTTCGTGCGCGCCGGAGGCAAGGTGCTGGTGCTTGATCCCGCGGCTGATATTCCCGGTTGCGCGTCCGGGTTTTCCG
CCGGTGAGGCCGGCGAGCGACTGCAGACCGCCATCGTCGTGGCCAGGAAATCACATCTGATCATCGACGCGATGACCGGC
ATCGGCATCCAAGGCTCGCTACGCGGCATTCCCGCCGCACTCGCCTCCGCCCTTGGTCTCGACGGCGAGGCTCCCGATGA
GCCCGCCTTGCCGAACCGTGAGTCGTCAGGCGATTTTCCGCTGGTACTTGCTGTGGATACGCCATCCGGCGTCGGTGTGA
ACGATGGTTCTCTGCCCGGCCCGTACATTCCGGCCACGGTCACGGTCACGTTCGGCGCGATGAAGCCGTGCGCGGTGCTG
CCGCCCGCCACGTTCGCCTGCGGCCGTATCGAGTTGTTCGATTTCGGATTCGATATCGACGACAAGGATCCGGACGTCGA
GGTGGTGGATAATTCGTTCGCGTCCGACGCGGTCCGTCTCCCCCGGTTCGAGGATTCCAAATACTCCCGGGGCGTGGTTG
GTCTGGTGACCGGCTCGCAGCGCTACCCCGGTGCCGCCGTGCTCACCACCAGCGCCGCCGCCCGCGCGAACACCGGCATG
GTCCGGTATCTGGGCCCGGAGCGCGCGCAGAACATGGTGCTCACCGCACTGCCGGAAGCCGTGATCGGCAAGGGACATGT
GCAGTCCTGGGTCGTGGGGTCCGGCGTGCCCGAGGCTAGCGTCGAGGACGCCGACGGCGATATGCAGCGGGACACCATCG
CCGCATTGCTCAAGCATTACACGCTCGGCAGCGAGGATGAGAACAAGGACGCCTACGACATGCCGCCAATCGTGGTGGAT
GCCGGCGCACTTGACCTGCTGCCGGAGCGTGTGCCCGGCCAGGTGGTGATCACGCCACATGCCGGCGAGATGGCGAAACT
GCTCAACCGGTTCGAAATCGCCGCCAGCACCGCGGAGCATGCCGATTCGCACGAGCCATACACCGCCGACGACGTGCGGT
TGAACCCGTTGGCCAGCGCGAAGCGCGCCCACGAGCTCACCGGCGCCACCGTATTGCTGAAGGGCGCGGTGACCATCGTG
GTGGATGAGGACCACGTCTATGCGTCGGGCAGCGCGCCGGCCTGGCTGGGCACCGCCGGCGCGGGCGACGTGCTGGCCGG
TCTGACCGGCGCCCTGCTCGCCCAGCAGGATGACATGGCCACCACGGCCGAGACCGTGGCCTCGGCCGCATACCTGCATG
GCCTGGCGGCGGCGATCGCCTCCGAATCCGAGCAGCAGGGCTGGCAGGAGCCGGAACTGATCGGCCGCGAGCATCGCCAG
CGCTTCATGACGCTCGGCCACCCGATCGTGGCCGGCGACGTGGCCCACGCCATTCCCGAAGCCATCGCCGACGTCATCTC
ATAA

Upstream 100 bases:

>100_bases
GAAGGTCAAGCGCTCGATCCCCGTGCTCGAAAAGTTCGCCCACGAGGTGTACGGCCTGTAAACACGGACCGCAAGTAACA
AACACAGGAAAGGGGTTGCC

Downstream 100 bases:

>100_bases
CCTTGTTGACCTCCCTCTGACGAGGGAGGTGTCTCGGCAAAACCAAGACGGAGGGAGAGAAACATAAGCCTCAAACTCCA
CATACCCCAACCTATACACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 587; Mature: 587

Protein sequence:

>587_residues
MEYTEDADRRELLLHSAYDSDTVRAMERPLLDKGVPLMRMAAQAAAHMAAGMLDDEDLALEDTSIVLLAGAGDNGGDGLF
AAAALAQEGANVTAIAVGRSLHEAGLASFVRAGGKVLVLDPAADIPGCASGFSAGEAGERLQTAIVVARKSHLIIDAMTG
IGIQGSLRGIPAALASALGLDGEAPDEPALPNRESSGDFPLVLAVDTPSGVGVNDGSLPGPYIPATVTVTFGAMKPCAVL
PPATFACGRIELFDFGFDIDDKDPDVEVVDNSFASDAVRLPRFEDSKYSRGVVGLVTGSQRYPGAAVLTTSAAARANTGM
VRYLGPERAQNMVLTALPEAVIGKGHVQSWVVGSGVPEASVEDADGDMQRDTIAALLKHYTLGSEDENKDAYDMPPIVVD
AGALDLLPERVPGQVVITPHAGEMAKLLNRFEIAASTAEHADSHEPYTADDVRLNPLASAKRAHELTGATVLLKGAVTIV
VDEDHVYASGSAPAWLGTAGAGDVLAGLTGALLAQQDDMATTAETVASAAYLHGLAAAIASESEQQGWQEPELIGREHRQ
RFMTLGHPIVAGDVAHAIPEAIADVIS

Sequences:

>Translated_587_residues
MEYTEDADRRELLLHSAYDSDTVRAMERPLLDKGVPLMRMAAQAAAHMAAGMLDDEDLALEDTSIVLLAGAGDNGGDGLF
AAAALAQEGANVTAIAVGRSLHEAGLASFVRAGGKVLVLDPAADIPGCASGFSAGEAGERLQTAIVVARKSHLIIDAMTG
IGIQGSLRGIPAALASALGLDGEAPDEPALPNRESSGDFPLVLAVDTPSGVGVNDGSLPGPYIPATVTVTFGAMKPCAVL
PPATFACGRIELFDFGFDIDDKDPDVEVVDNSFASDAVRLPRFEDSKYSRGVVGLVTGSQRYPGAAVLTTSAAARANTGM
VRYLGPERAQNMVLTALPEAVIGKGHVQSWVVGSGVPEASVEDADGDMQRDTIAALLKHYTLGSEDENKDAYDMPPIVVD
AGALDLLPERVPGQVVITPHAGEMAKLLNRFEIAASTAEHADSHEPYTADDVRLNPLASAKRAHELTGATVLLKGAVTIV
VDEDHVYASGSAPAWLGTAGAGDVLAGLTGALLAQQDDMATTAETVASAAYLHGLAAAIASESEQQGWQEPELIGREHRQ
RFMTLGHPIVAGDVAHAIPEAIADVIS
>Mature_587_residues
MEYTEDADRRELLLHSAYDSDTVRAMERPLLDKGVPLMRMAAQAAAHMAAGMLDDEDLALEDTSIVLLAGAGDNGGDGLF
AAAALAQEGANVTAIAVGRSLHEAGLASFVRAGGKVLVLDPAADIPGCASGFSAGEAGERLQTAIVVARKSHLIIDAMTG
IGIQGSLRGIPAALASALGLDGEAPDEPALPNRESSGDFPLVLAVDTPSGVGVNDGSLPGPYIPATVTVTFGAMKPCAVL
PPATFACGRIELFDFGFDIDDKDPDVEVVDNSFASDAVRLPRFEDSKYSRGVVGLVTGSQRYPGAAVLTTSAAARANTGM
VRYLGPERAQNMVLTALPEAVIGKGHVQSWVVGSGVPEASVEDADGDMQRDTIAALLKHYTLGSEDENKDAYDMPPIVVD
AGALDLLPERVPGQVVITPHAGEMAKLLNRFEIAASTAEHADSHEPYTADDVRLNPLASAKRAHELTGATVLLKGAVTIV
VDEDHVYASGSAPAWLGTAGAGDVLAGLTGALLAQQDDMATTAETVASAAYLHGLAAAIASESEQQGWQEPELIGREHRQ
RFMTLGHPIVAGDVAHAIPEAIADVIS

Specific function: Unknown

COG id: COG0063

COG function: function code G; Predicted sugar kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 YjeF N-terminal domain [H]

Homologues:

Organism=Escherichia coli, GI1790609, Length=521, Percent_Identity=28.0230326295585, Blast_Score=101, Evalue=1e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017953
- InterPro:   IPR000631
- InterPro:   IPR004443 [H]

Pfam domain/function: PF01256 Carb_kinase; PF03853 YjeF_N [H]

EC number: NA

Molecular weight: Translated: 60763; Mature: 60763

Theoretical pI: Translated: 4.26; Mature: 4.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEYTEDADRRELLLHSAYDSDTVRAMERPLLDKGVPLMRMAAQAAAHMAAGMLDDEDLAL
CCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCEE
EDTSIVLLAGAGDNGGDGLFAAAALAQEGANVTAIAVGRSLHEAGLASFVRAGGKVLVLD
ECCEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCCEEEEEC
PAADIPGCASGFSAGEAGERLQTAIVVARKSHLIIDAMTGIGIQGSLRGIPAALASALGL
CCCCCCCCCCCCCCCCHHHHHHHHHEEEECCEEEEEECCCCCCCCCCCCHHHHHHHHHCC
DGEAPDEPALPNRESSGDFPLVLAVDTPSGVGVNDGSLPGPYIPATVTVTFGAMKPCAVL
CCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCC
PPATFACGRIELFDFGFDIDDKDPDVEVVDNSFASDAVRLPRFEDSKYSRGVVGLVTGSQ
CCCCCCCCEEEEEEECCCCCCCCCCCEEECCCCCCCCEECCCCCCCCCCCCEEEEEECCC
RYPGAAVLTTSAAARANTGMVRYLGPERAQNMVLTALPEAVIGKGHVQSWVVGSGVPEAS
CCCCEEEEECCHHHHCCCCEEEECCHHHHHCHHHHHCCHHHHCCCCHHEEEECCCCCCCC
VEDADGDMQRDTIAALLKHYTLGSEDENKDAYDMPPIVVDAGALDLLPERVPGQVVITPH
CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCHHHHCCCCCCCCEEEECC
AGEMAKLLNRFEIAASTAEHADSHEPYTADDVRLNPLASAKRAHELTGATVLLKGAVTIV
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCHHHHHHHHHHCCCEEEEECEEEEE
VDEDHVYASGSAPAWLGTAGAGDVLAGLTGALLAQQDDMATTAETVASAAYLHGLAAAIA
EECCEEEECCCCCCEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
SESEQQGWQEPELIGREHRQRFMTLGHPIVAGDVAHAIPEAIADVIS
CCHHHCCCCCHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MEYTEDADRRELLLHSAYDSDTVRAMERPLLDKGVPLMRMAAQAAAHMAAGMLDDEDLAL
CCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCEE
EDTSIVLLAGAGDNGGDGLFAAAALAQEGANVTAIAVGRSLHEAGLASFVRAGGKVLVLD
ECCEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCCEEEEEC
PAADIPGCASGFSAGEAGERLQTAIVVARKSHLIIDAMTGIGIQGSLRGIPAALASALGL
CCCCCCCCCCCCCCCCHHHHHHHHHEEEECCEEEEEECCCCCCCCCCCCHHHHHHHHHCC
DGEAPDEPALPNRESSGDFPLVLAVDTPSGVGVNDGSLPGPYIPATVTVTFGAMKPCAVL
CCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCC
PPATFACGRIELFDFGFDIDDKDPDVEVVDNSFASDAVRLPRFEDSKYSRGVVGLVTGSQ
CCCCCCCCEEEEEEECCCCCCCCCCCEEECCCCCCCCEECCCCCCCCCCCCEEEEEECCC
RYPGAAVLTTSAAARANTGMVRYLGPERAQNMVLTALPEAVIGKGHVQSWVVGSGVPEAS
CCCCEEEEECCHHHHCCCCEEEECCHHHHHCHHHHHCCHHHHCCCCHHEEEECCCCCCCC
VEDADGDMQRDTIAALLKHYTLGSEDENKDAYDMPPIVVDAGALDLLPERVPGQVVITPH
CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCHHHHCCCCCCCCEEEECC
AGEMAKLLNRFEIAASTAEHADSHEPYTADDVRLNPLASAKRAHELTGATVLLKGAVTIV
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCHHHHHHHHHHCCCEEEEECEEEEE
VDEDHVYASGSAPAWLGTAGAGDVLAGLTGALLAQQDDMATTAETVASAAYLHGLAAAIA
EECCEEEECCCCCCEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
SESEQQGWQEPELIGREHRQRFMTLGHPIVAGDVAHAIPEAIADVIS
CCHHHCCCCCHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]