Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

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The map label for this gene is 213692267

Identifier: 213692267

GI number: 213692267

Start: 1555111

End: 1555665

Strand: Direct

Name: 213692267

Synonym: Blon_1388

Alternate gene names: NA

Gene position: 1555111-1555665 (Clockwise)

Preceding gene: 213692266

Following gene: 213692270

Centisome position: 54.9

GC content: 62.7

Gene sequence:

>555_bases
TTGTGTGATGATTGGCGTGTGTGTACGCCGGGGTATGGCATCACGCTTGACCGGTTCATGAGGGTCGCGCACCTGTTGCC
GCGACAGAGGGGCAACGTGGCGGTCGACAACTACAGGTTCGTCAACGCCCTGCTGTGGATGTGCAGGACGGGAGCCCCGT
GGAGGGACCTGCCGGAGTGCTATGGCAAGTGGATCACCGTCTGCCGGCGGTTCAACCGCTGGTCCGGGAACGGCGCGATG
GAACGCCTGTTCACGGCATTGCAGGAGGAGCGGATCATCGCCGTCGAGGTTTGGGTGCTCGCCATGGACTCCACGAGCGT
GAAGGTCCACCAGCACGCGGTCGTGCCGCCCAAGAGGAACCGCACGGGCCCATGGGACTACGACAGGCAGGCGTACAAGG
GGCGGAACATGGTCGAACGCGTCTTTCAACCGCATGAAGCACCACCGCAAGGCCGCCACCCGCTACGACAGGCTCGACGC
CACCTTCCTCGCCAACCTCCAGCTCATCCTCATCGCCATCCAACTCAAAAACGCCAGCAAAACCAACTAGCGTAA

Upstream 100 bases:

>100_bases
CATTCAATCCAAGCTATCAACGGTAGTATTATTGCAATAGTTCCCTCATGGATAAAAGGCAAATGTTTTCGCTTACCAGA
AAGTCTCTTAGTCTTAGGTT

Downstream 100 bases:

>100_bases
ACACACCATAGGTTACTTTCCCCGATACACGGCAGCGACGCCGAATATGATGAACAGTCCCAGCAGGAAGATCAGAGCTC
CCGGCCGGTACGTGCGGTAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MCDDWRVCTPGYGITLDRFMRVAHLLPRQRGNVAVDNYRFVNALLWMCRTGAPWRDLPECYGKWITVCRRFNRWSGNGAM
ERLFTALQEERIIAVEVWVLAMDSTSVKVHQHAVVPPKRNRTGPWDYDRQAYKGRNMVERVFQPHEAPPQGRHPLRQARR
HLPRQPPAHPHRHPTQKRQQNQLA

Sequences:

>Translated_184_residues
MCDDWRVCTPGYGITLDRFMRVAHLLPRQRGNVAVDNYRFVNALLWMCRTGAPWRDLPECYGKWITVCRRFNRWSGNGAM
ERLFTALQEERIIAVEVWVLAMDSTSVKVHQHAVVPPKRNRTGPWDYDRQAYKGRNMVERVFQPHEAPPQGRHPLRQARR
HLPRQPPAHPHRHPTQKRQQNQLA
>Mature_184_residues
MCDDWRVCTPGYGITLDRFMRVAHLLPRQRGNVAVDNYRFVNALLWMCRTGAPWRDLPECYGKWITVCRRFNRWSGNGAM
ERLFTALQEERIIAVEVWVLAMDSTSVKVHQHAVVPPKRNRTGPWDYDRQAYKGRNMVERVFQPHEAPPQGRHPLRQARR
HLPRQPPAHPHRHPTQKRQQNQLA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To transposase of insertion sequence IS6501 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21718; Mature: 21718

Theoretical pI: Translated: 11.13; Mature: 11.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCDDWRVCTPGYGITLDRFMRVAHLLPRQRGNVAVDNYRFVNALLWMCRTGAPWRDLPEC
CCCCCEEECCCCCCCHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHHCCCCCCCHHHHH
YGKWITVCRRFNRWSGNGAMERLFTALQEERIIAVEVWVLAMDSTSVKVHQHAVVPPKRN
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCEEEEEEEEEEECCCCEEEHHEECCCCCCC
RTGPWDYDRQAYKGRNMVERVFQPHEAPPQGRHPLRQARRHLPRQPPAHPHRHPTQKRQQ
CCCCCCCCHHHHCCHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHH
NQLA
HCCC
>Mature Secondary Structure
MCDDWRVCTPGYGITLDRFMRVAHLLPRQRGNVAVDNYRFVNALLWMCRTGAPWRDLPEC
CCCCCEEECCCCCCCHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHHCCCCCCCHHHHH
YGKWITVCRRFNRWSGNGAMERLFTALQEERIIAVEVWVLAMDSTSVKVHQHAVVPPKRN
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCEEEEEEEEEEECCCCEEEHHEECCCCCCC
RTGPWDYDRQAYKGRNMVERVFQPHEAPPQGRHPLRQARRHLPRQPPAHPHRHPTQKRQQ
CCCCCCCCHHHHCCHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHH
NQLA
HCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424; 8190622 [H]