| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692267
Identifier: 213692267
GI number: 213692267
Start: 1555111
End: 1555665
Strand: Direct
Name: 213692267
Synonym: Blon_1388
Alternate gene names: NA
Gene position: 1555111-1555665 (Clockwise)
Preceding gene: 213692266
Following gene: 213692270
Centisome position: 54.9
GC content: 62.7
Gene sequence:
>555_bases TTGTGTGATGATTGGCGTGTGTGTACGCCGGGGTATGGCATCACGCTTGACCGGTTCATGAGGGTCGCGCACCTGTTGCC GCGACAGAGGGGCAACGTGGCGGTCGACAACTACAGGTTCGTCAACGCCCTGCTGTGGATGTGCAGGACGGGAGCCCCGT GGAGGGACCTGCCGGAGTGCTATGGCAAGTGGATCACCGTCTGCCGGCGGTTCAACCGCTGGTCCGGGAACGGCGCGATG GAACGCCTGTTCACGGCATTGCAGGAGGAGCGGATCATCGCCGTCGAGGTTTGGGTGCTCGCCATGGACTCCACGAGCGT GAAGGTCCACCAGCACGCGGTCGTGCCGCCCAAGAGGAACCGCACGGGCCCATGGGACTACGACAGGCAGGCGTACAAGG GGCGGAACATGGTCGAACGCGTCTTTCAACCGCATGAAGCACCACCGCAAGGCCGCCACCCGCTACGACAGGCTCGACGC CACCTTCCTCGCCAACCTCCAGCTCATCCTCATCGCCATCCAACTCAAAAACGCCAGCAAAACCAACTAGCGTAA
Upstream 100 bases:
>100_bases CATTCAATCCAAGCTATCAACGGTAGTATTATTGCAATAGTTCCCTCATGGATAAAAGGCAAATGTTTTCGCTTACCAGA AAGTCTCTTAGTCTTAGGTT
Downstream 100 bases:
>100_bases ACACACCATAGGTTACTTTCCCCGATACACGGCAGCGACGCCGAATATGATGAACAGTCCCAGCAGGAAGATCAGAGCTC CCGGCCGGTACGTGCGGTAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 184; Mature: 184
Protein sequence:
>184_residues MCDDWRVCTPGYGITLDRFMRVAHLLPRQRGNVAVDNYRFVNALLWMCRTGAPWRDLPECYGKWITVCRRFNRWSGNGAM ERLFTALQEERIIAVEVWVLAMDSTSVKVHQHAVVPPKRNRTGPWDYDRQAYKGRNMVERVFQPHEAPPQGRHPLRQARR HLPRQPPAHPHRHPTQKRQQNQLA
Sequences:
>Translated_184_residues MCDDWRVCTPGYGITLDRFMRVAHLLPRQRGNVAVDNYRFVNALLWMCRTGAPWRDLPECYGKWITVCRRFNRWSGNGAM ERLFTALQEERIIAVEVWVLAMDSTSVKVHQHAVVPPKRNRTGPWDYDRQAYKGRNMVERVFQPHEAPPQGRHPLRQARR HLPRQPPAHPHRHPTQKRQQNQLA >Mature_184_residues MCDDWRVCTPGYGITLDRFMRVAHLLPRQRGNVAVDNYRFVNALLWMCRTGAPWRDLPECYGKWITVCRRFNRWSGNGAM ERLFTALQEERIIAVEVWVLAMDSTSVKVHQHAVVPPKRNRTGPWDYDRQAYKGRNMVERVFQPHEAPPQGRHPLRQARR HLPRQPPAHPHRHPTQKRQQNQLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To transposase of insertion sequence IS6501 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21718; Mature: 21718
Theoretical pI: Translated: 11.13; Mature: 11.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCDDWRVCTPGYGITLDRFMRVAHLLPRQRGNVAVDNYRFVNALLWMCRTGAPWRDLPEC CCCCCEEECCCCCCCHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHHCCCCCCCHHHHH YGKWITVCRRFNRWSGNGAMERLFTALQEERIIAVEVWVLAMDSTSVKVHQHAVVPPKRN HHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCEEEEEEEEEEECCCCEEEHHEECCCCCCC RTGPWDYDRQAYKGRNMVERVFQPHEAPPQGRHPLRQARRHLPRQPPAHPHRHPTQKRQQ CCCCCCCCHHHHCCHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHH NQLA HCCC >Mature Secondary Structure MCDDWRVCTPGYGITLDRFMRVAHLLPRQRGNVAVDNYRFVNALLWMCRTGAPWRDLPEC CCCCCEEECCCCCCCHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHHCCCCCCCHHHHH YGKWITVCRRFNRWSGNGAMERLFTALQEERIIAVEVWVLAMDSTSVKVHQHAVVPPKRN HHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCEEEEEEEEEEECCCCEEEHHEECCCCCCC RTGPWDYDRQAYKGRNMVERVFQPHEAPPQGRHPLRQARRHLPRQPPAHPHRHPTQKRQQ CCCCCCCCHHHHCCHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHH NQLA HCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163424; 8190622 [H]