| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692193
Identifier: 213692193
GI number: 213692193
Start: 1495720
End: 1496400
Strand: Direct
Name: 213692193
Synonym: Blon_1313
Alternate gene names: NA
Gene position: 1495720-1496400 (Clockwise)
Preceding gene: 213692192
Following gene: 213692194
Centisome position: 52.8
GC content: 61.09
Gene sequence:
>681_bases ATGATCGACCCGAAGAAAAACGGAAACAGGACGCTGCGCGTCCGCTACGATAGCGGCGCCATATTCGTCGGTCCGGCGAT CATCACCGACGAGGGGGATACGCTCGTCCTGCTGGGCGGAGCCTCATCCCTGCTCGTCCGACGCGCGGACGGAAGCCTGC CATTGCACGTGGCTGCGGTGGAAACGCCGCCGGAGGATGATGGTCCGTGCCTGGATGCGGCTTTGGCCGTGTTCGACGAA ACCATCGAGGACGGCGGCGGCCGCCGGACGGCCATGTCCTGCGCGATACGCGCCTACGATGAGCGGAATCCCGGACACCC GACATTGTTCGTCGATCTTTGCAACGACAGGTCGTTCGAAAGAATGGTGAGAAAGACCGGGGGAAGAGCATTCAGGCTGG ATTCGCAGGACGAAGGCCGTGAAATAGATCCCCTGTCCTTCGCGGATCATGACTTTTCCCGTGAGGCGGCGCGTTCCGGC AATCCTCTAATCAGGATTGATCCGGTCAAGGGCGGGCCCATCGCCGTCTACCTCCCTGATGGTTCAATCAGGGTCGGGGA CGAAATGGATTTCCTGCTCAGGGATGAAGCCGACGCGCGAACCAGCACGAATAAACCGAATCCAGGGAAGCCAGCTCGAA ATCCGGAAGGAGCAGAGGTCTCCCCGGATCTCCGACGGTGA
Upstream 100 bases:
>100_bases CCGGGAGCCTAGGGCCGTTCATCCTATACGGGGCGGTATCCATTGCAACCGGCTGGGCCGGATTATCGAAAGTTGATCTG CATGTGAAAAGGACGAACGA
Downstream 100 bases:
>100_bases AGCCATGATCCCGATAATATCCGCGCATTACGGGTTTGCAGCTGCCGGCAGCCCAGCGGCATTCCCTCGGAGCCGCCGAA TCCAGCAGATACAGGAGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 226; Mature: 226
Protein sequence:
>226_residues MIDPKKNGNRTLRVRYDSGAIFVGPAIITDEGDTLVLLGGASSLLVRRADGSLPLHVAAVETPPEDDGPCLDAALAVFDE TIEDGGGRRTAMSCAIRAYDERNPGHPTLFVDLCNDRSFERMVRKTGGRAFRLDSQDEGREIDPLSFADHDFSREAARSG NPLIRIDPVKGGPIAVYLPDGSIRVGDEMDFLLRDEADARTSTNKPNPGKPARNPEGAEVSPDLRR
Sequences:
>Translated_226_residues MIDPKKNGNRTLRVRYDSGAIFVGPAIITDEGDTLVLLGGASSLLVRRADGSLPLHVAAVETPPEDDGPCLDAALAVFDE TIEDGGGRRTAMSCAIRAYDERNPGHPTLFVDLCNDRSFERMVRKTGGRAFRLDSQDEGREIDPLSFADHDFSREAARSG NPLIRIDPVKGGPIAVYLPDGSIRVGDEMDFLLRDEADARTSTNKPNPGKPARNPEGAEVSPDLRR >Mature_226_residues MIDPKKNGNRTLRVRYDSGAIFVGPAIITDEGDTLVLLGGASSLLVRRADGSLPLHVAAVETPPEDDGPCLDAALAVFDE TIEDGGGRRTAMSCAIRAYDERNPGHPTLFVDLCNDRSFERMVRKTGGRAFRLDSQDEGREIDPLSFADHDFSREAARSG NPLIRIDPVKGGPIAVYLPDGSIRVGDEMDFLLRDEADARTSTNKPNPGKPARNPEGAEVSPDLRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24497; Mature: 24497
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDPKKNGNRTLRVRYDSGAIFVGPAIITDEGDTLVLLGGASSLLVRRADGSLPLHVAAV CCCCCCCCCEEEEEEECCCEEEECCEEEECCCCEEEEECCCCEEEEEECCCCCCEEEEEE ETPPEDDGPCLDAALAVFDETIEDGGGRRTAMSCAIRAYDERNPGHPTLFVDLCNDRSFE CCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEHEEEEEECCCCCCCCCEEEEEECCCCHHH RMVRKTGGRAFRLDSQDEGREIDPLSFADHDFSREAARSGNPLIRIDPVKGGPIAVYLPD HHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHCCCCEEEEECCCCCEEEEEECC GSIRVGDEMDFLLRDEADARTSTNKPNPGKPARNPEGAEVSPDLRR CCEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MIDPKKNGNRTLRVRYDSGAIFVGPAIITDEGDTLVLLGGASSLLVRRADGSLPLHVAAV CCCCCCCCCEEEEEEECCCEEEECCEEEECCCCEEEEECCCCEEEEEECCCCCCEEEEEE ETPPEDDGPCLDAALAVFDETIEDGGGRRTAMSCAIRAYDERNPGHPTLFVDLCNDRSFE CCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEHEEEEEECCCCCCCCCEEEEEECCCCHHH RMVRKTGGRAFRLDSQDEGREIDPLSFADHDFSREAARSGNPLIRIDPVKGGPIAVYLPD HHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHCCCCEEEEECCCCCEEEEEECC GSIRVGDEMDFLLRDEADARTSTNKPNPGKPARNPEGAEVSPDLRR CCEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA