Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

Click here to switch to the map view.

The map label for this gene is 213692180

Identifier: 213692180

GI number: 213692180

Start: 1487491

End: 1488306

Strand: Direct

Name: 213692180

Synonym: Blon_1300

Alternate gene names: NA

Gene position: 1487491-1488306 (Clockwise)

Preceding gene: 213692179

Following gene: 213692181

Centisome position: 52.51

GC content: 58.46

Gene sequence:

>816_bases
ATGGCCGAAACTGACCGCATCGCCCGATTGGAGACCGCATTCACCGGACGCAACGCATGGAACACCGGATGGCAATGGGC
CGATAGTTATGGTGATCTGATCTACAATCACCCGGACGGTTCCAAACGTGAACTGGGTTCCTGTTATGACCGGGACAAGC
TGATCGCGTTCTCGAATACGCTCGACGGCTCACATGGAAACCTGCTGAAGCACATGCGCGACAAGAACCCGCTCAGGTCG
AACGACCCGATGGCGGATATCATGATCGGCATCCTGCGCCAGACCAGCCCGGAACTGCTGCGCCGACTGTCCGATGACCC
GCAGGGATTCCGAGACCTGTGGTCATTTGTCTGGCAGCGGGCGAAGGAGCCTCCCGAACCGGCATATCTGCTGCTCGACG
GGAAAGACGTGAACGAGTGCAGGAAGGCGGCGCTGAAAACCATCAACCGGTACCGTTCGTTCTACCGGAGCCTCGACGCC
GAACTGGATAGGCTCACCGATGGCGGATACGGATGCATGATCATGTATGAGACCGCCATCCAGGCCGAAATCAGGTTGAA
AAGGTACTCATGGGACGAGCGGGGACGCTGGTGCATGAATCCGATGATGACACTCTCCGGCAATCTGGAGATTCTGCTGG
AACCTGATTCGACCGACTGGCGTCACAAGACACCGCACGTGCATGGGACCATCAGCACCGGTTTCGCCTACCGTCCGAAC
GACGGCCACCAGTGGGATGAGCCAAAACATCATGCGACGCCTGAACGTCTGGCCGGCGCGATCATCCGACAGTTGAAGGG
CAAGGGCTTGCTGTGA

Upstream 100 bases:

>100_bases
CCGTGCCGGTCGATCTGGTCAGTCGGCTCGCCGCATTCACTTTGACTCACCCGAACGAGCCGGATGGCATCACGACTCGA
AAATCCTGAAAGGAGCGATA

Downstream 100 bases:

>100_bases
AAACCGTTTGCATCGATATCGACAACACGATCGCCGACTACACGAACGGTCTGCGCGACTACATCCGCGAATGCGGACAT
GGCGAGGACGAATGCCCGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 271; Mature: 270

Protein sequence:

>271_residues
MAETDRIARLETAFTGRNAWNTGWQWADSYGDLIYNHPDGSKRELGSCYDRDKLIAFSNTLDGSHGNLLKHMRDKNPLRS
NDPMADIMIGILRQTSPELLRRLSDDPQGFRDLWSFVWQRAKEPPEPAYLLLDGKDVNECRKAALKTINRYRSFYRSLDA
ELDRLTDGGYGCMIMYETAIQAEIRLKRYSWDERGRWCMNPMMTLSGNLEILLEPDSTDWRHKTPHVHGTISTGFAYRPN
DGHQWDEPKHHATPERLAGAIIRQLKGKGLL

Sequences:

>Translated_271_residues
MAETDRIARLETAFTGRNAWNTGWQWADSYGDLIYNHPDGSKRELGSCYDRDKLIAFSNTLDGSHGNLLKHMRDKNPLRS
NDPMADIMIGILRQTSPELLRRLSDDPQGFRDLWSFVWQRAKEPPEPAYLLLDGKDVNECRKAALKTINRYRSFYRSLDA
ELDRLTDGGYGCMIMYETAIQAEIRLKRYSWDERGRWCMNPMMTLSGNLEILLEPDSTDWRHKTPHVHGTISTGFAYRPN
DGHQWDEPKHHATPERLAGAIIRQLKGKGLL
>Mature_270_residues
AETDRIARLETAFTGRNAWNTGWQWADSYGDLIYNHPDGSKRELGSCYDRDKLIAFSNTLDGSHGNLLKHMRDKNPLRSN
DPMADIMIGILRQTSPELLRRLSDDPQGFRDLWSFVWQRAKEPPEPAYLLLDGKDVNECRKAALKTINRYRSFYRSLDAE
LDRLTDGGYGCMIMYETAIQAEIRLKRYSWDERGRWCMNPMMTLSGNLEILLEPDSTDWRHKTPHVHGTISTGFAYRPND
GHQWDEPKHHATPERLAGAIIRQLKGKGLL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31281; Mature: 31149

Theoretical pI: Translated: 7.63; Mature: 7.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAETDRIARLETAFTGRNAWNTGWQWADSYGDLIYNHPDGSKRELGSCYDRDKLIAFSNT
CCCCHHHHHHHHHHCCCCCCCCCCCHHCCCCCEEEECCCCCHHHHHHHCCCCCEEEEECC
LDGSHGNLLKHMRDKNPLRSNDPMADIMIGILRQTSPELLRRLSDDPQGFRDLWSFVWQR
CCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHH
AKEPPEPAYLLLDGKDVNECRKAALKTINRYRSFYRSLDAELDRLTDGGYGCMIMYETAI
CCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECHH
QAEIRLKRYSWDERGRWCMNPMMTLSGNLEILLEPDSTDWRHKTPHVHGTISTGFAYRPN
HHHHHHHHCCCCCCCCCHHCCCEEECCCEEEEECCCCCCCCCCCCCEEEEECCCEEECCC
DGHQWDEPKHHATPERLAGAIIRQLKGKGLL
CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
AETDRIARLETAFTGRNAWNTGWQWADSYGDLIYNHPDGSKRELGSCYDRDKLIAFSNT
CCCHHHHHHHHHHCCCCCCCCCCCHHCCCCCEEEECCCCCHHHHHHHCCCCCEEEEECC
LDGSHGNLLKHMRDKNPLRSNDPMADIMIGILRQTSPELLRRLSDDPQGFRDLWSFVWQR
CCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHH
AKEPPEPAYLLLDGKDVNECRKAALKTINRYRSFYRSLDAELDRLTDGGYGCMIMYETAI
CCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECHH
QAEIRLKRYSWDERGRWCMNPMMTLSGNLEILLEPDSTDWRHKTPHVHGTISTGFAYRPN
HHHHHHHHCCCCCCCCCHHCCCEEECCCEEEEECCCCCCCCCCCCCEEEEECCCEEECCC
DGHQWDEPKHHATPERLAGAIIRQLKGKGLL
CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA