| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692175
Identifier: 213692175
GI number: 213692175
Start: 1484895
End: 1485317
Strand: Direct
Name: 213692175
Synonym: Blon_1295
Alternate gene names: NA
Gene position: 1484895-1485317 (Clockwise)
Preceding gene: 213692174
Following gene: 213692176
Centisome position: 52.42
GC content: 60.28
Gene sequence:
>423_bases ATGACCCGACATGTCAGACTCAAGACCCCATGCCCGTTATGCCAAGGCCGTCTGGACGCCGTCGTCCGGCGTATGCCGCT ACTGGGCTGGCATATGGTCGGATTGACGTGCGGGCACGGGTGCGACATCCGCTGGTTCAACCGGGACATCGATTTCAGCC GCTCATGGTATCCGACCGCCGAAGACTGTGCGGAATACCCAGACGACTTCCTCCGTGGCTGCGTCGAATATGTGAACATG CTGCTCTCAACCGAATGTCCGAAATGCGGGGAGCGCCCGAAAATCGGGATGGGACCCCGCATGTGTGAACGTTTCCCGTC CGTATCATGCCGGTGCGCGAGCGAATGGGGAGGCGACCTGTGCGAGGCAGCACGCGAATGGGCTTACGCCACGGGCGTGT ACTGGAAATGTCTGAAACGTTGA
Upstream 100 bases:
>100_bases GAATCAACCTGCATGACGGGCGACAGGTCACATGTCTGATATTAAGCGGAGATATCAGAAGCGGCATGTCCTGTGACTGG GCGAACGCCAAGGAGACCGA
Downstream 100 bases:
>100_bases GAGAAGTCCCTTCGGACTTCCGCCAAACCCGCCCGATTGGAATACCCGGAAGGCGTGTTCACCACGGAAATCCGGCAGAA CGACGAAGGCGGTTTCCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 140; Mature: 139
Protein sequence:
>140_residues MTRHVRLKTPCPLCQGRLDAVVRRMPLLGWHMVGLTCGHGCDIRWFNRDIDFSRSWYPTAEDCAEYPDDFLRGCVEYVNM LLSTECPKCGERPKIGMGPRMCERFPSVSCRCASEWGGDLCEAAREWAYATGVYWKCLKR
Sequences:
>Translated_140_residues MTRHVRLKTPCPLCQGRLDAVVRRMPLLGWHMVGLTCGHGCDIRWFNRDIDFSRSWYPTAEDCAEYPDDFLRGCVEYVNM LLSTECPKCGERPKIGMGPRMCERFPSVSCRCASEWGGDLCEAAREWAYATGVYWKCLKR >Mature_139_residues TRHVRLKTPCPLCQGRLDAVVRRMPLLGWHMVGLTCGHGCDIRWFNRDIDFSRSWYPTAEDCAEYPDDFLRGCVEYVNML LSTECPKCGERPKIGMGPRMCERFPSVSCRCASEWGGDLCEAAREWAYATGVYWKCLKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16136; Mature: 16005
Theoretical pI: Translated: 7.95; Mature: 7.95
Prosite motif: PS00022 EGF_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
9.3 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 13.6 %Cys+Met (Translated Protein) 9.4 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 12.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRHVRLKTPCPLCQGRLDAVVRRMPLLGWHMVGLTCGHGCDIRWFNRDIDFSRSWYPTA CCCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCH EDCAEYPDDFLRGCVEYVNMLLSTECPKCGERPKIGMGPRMCERFPSVSCRCASEWGGDL HHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCEEEHHHCCHHH CEAAREWAYATGVYWKCLKR HHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TRHVRLKTPCPLCQGRLDAVVRRMPLLGWHMVGLTCGHGCDIRWFNRDIDFSRSWYPTA CCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCH EDCAEYPDDFLRGCVEYVNMLLSTECPKCGERPKIGMGPRMCERFPSVSCRCASEWGGDL HHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCEEEHHHCCHHH CEAAREWAYATGVYWKCLKR HHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA