| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
Click here to switch to the map view.
The map label for this gene is 213692174
Identifier: 213692174
GI number: 213692174
Start: 1484599
End: 1484898
Strand: Direct
Name: 213692174
Synonym: Blon_1294
Alternate gene names: NA
Gene position: 1484599-1484898 (Clockwise)
Preceding gene: 213692173
Following gene: 213692175
Centisome position: 52.41
GC content: 55.0
Gene sequence:
>300_bases ATGATGTTCACGAGACAGGAAACGGACTTGAGAAGACTACTGGCGATGCTACTGATTTTCGCATGCCTGCTGTGCGCCGG ATGTGAGGGGGCGGAAGGAGCGACACGGGAGACGAAGTCCGACACATCGGTCTCCCAGTCGGGCGAGACTATCACCGATT GCAAGGACTACGATTACAGTCGGCTTCGCGAATGCAGAATCAACCTGCATGACGGGCGACAGGTCACATGTCTGATATTA AGCGGAGATATCAGAAGCGGCATGTCCTGTGACTGGGCGAACGCCAAGGAGACCGAATGA
Upstream 100 bases:
>100_bases CTTCGGATTCCGATGCACCGTCCGAGTACCAAGAAGGACTCACGGACGCCTTCGACCGAGCCGAAGCAGCCTTCCGCCGC ATCTTCGACGTCAAGGAGAA
Downstream 100 bases:
>100_bases CCCGACATGTCAGACTCAAGACCCCATGCCCGTTATGCCAAGGCCGTCTGGACGCCGTCGTCCGGCGTATGCCGCTACTG GGCTGGCATATGGTCGGATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 99; Mature: 99
Protein sequence:
>99_residues MMFTRQETDLRRLLAMLLIFACLLCAGCEGAEGATRETKSDTSVSQSGETITDCKDYDYSRLRECRINLHDGRQVTCLIL SGDIRSGMSCDWANAKETE
Sequences:
>Translated_99_residues MMFTRQETDLRRLLAMLLIFACLLCAGCEGAEGATRETKSDTSVSQSGETITDCKDYDYSRLRECRINLHDGRQVTCLIL SGDIRSGMSCDWANAKETE >Mature_99_residues MMFTRQETDLRRLLAMLLIFACLLCAGCEGAEGATRETKSDTSVSQSGETITDCKDYDYSRLRECRINLHDGRQVTCLIL SGDIRSGMSCDWANAKETE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11078; Mature: 11078
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
7.1 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 11.1 %Cys+Met (Translated Protein) 7.1 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 11.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMFTRQETDLRRLLAMLLIFACLLCAGCEGAEGATRETKSDTSVSQSGETITDCKDYDYS CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH RLRECRINLHDGRQVTCLILSGDIRSGMSCDWANAKETE HHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCC >Mature Secondary Structure MMFTRQETDLRRLLAMLLIFACLLCAGCEGAEGATRETKSDTSVSQSGETITDCKDYDYS CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH RLRECRINLHDGRQVTCLILSGDIRSGMSCDWANAKETE HHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA