| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is secE
Identifier: 213692145
GI number: 213692145
Start: 1468610
End: 1468822
Strand: Direct
Name: secE
Synonym: Blon_1265
Alternate gene names: NA
Gene position: 1468610-1468822 (Clockwise)
Preceding gene: 213692139
Following gene: 213692146
Centisome position: 51.84
GC content: 58.69
Gene sequence:
>213_bases ATGGAAAGAAAATCGTTGGCATACGACCCGTTTCAGCCGATAGGCCGATTCTGCCGGCAGATCGTGGACGAACTGCGCAA GACCGTGACTCCGGCCGCCCGTGAATGGCTGGCCTGGAGTATCGCCGCATTCGTGTTCGTCATCCCGCTCATGGCATTGG CCGCGGGCATGGATCTCGGTATCGGCAGACTCACTCTCATGGTGTTCGGATGA
Upstream 100 bases:
>100_bases TGCTCGCATGGCCCATCCGCCGTTCCTCATGCCAGAACGGTTCCGCCCCTCCCGCGTCGCGGGAGGGGCTTTTCCGTTTT CCGGACGCATAGGAGCAGGC
Downstream 100 bases:
>100_bases CGGTCGCACATCCCGTGAACCTTGCCATGCTGATATGGATGGGCATCGCCCTGCTCGCATTTCTTCTCATGAGCGTATGG ACGGACGATCCGGAGCGTCG
Product: preprotein translocase subunit SecE
Products: NA
Alternate protein names: Preprotein Translocase Subunit SecE; Protein Translocase Subunit SecE; Protein Translocase Subunit
Number of amino acids: Translated: 70; Mature: 70
Protein sequence:
>70_residues MERKSLAYDPFQPIGRFCRQIVDELRKTVTPAAREWLAWSIAAFVFVIPLMALAAGMDLGIGRLTLMVFG
Sequences:
>Translated_70_residues MERKSLAYDPFQPIGRFCRQIVDELRKTVTPAAREWLAWSIAAFVFVIPLMALAAGMDLGIGRLTLMVFG >Mature_70_residues MERKSLAYDPFQPIGRFCRQIVDELRKTVTPAAREWLAWSIAAFVFVIPLMALAAGMDLGIGRLTLMVFG
Specific function: Unknown
COG id: COG0690
COG function: function code U; Preprotein translocase subunit SecE
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7858; Mature: 7858
Theoretical pI: Translated: 9.40; Mature: 9.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 5.7 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 5.7 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERKSLAYDPFQPIGRFCRQIVDELRKTVTPAAREWLAWSIAAFVFVIPLMALAAGMDLG CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC IGRLTLMVFG HHHHHHHCCC >Mature Secondary Structure MERKSLAYDPFQPIGRFCRQIVDELRKTVTPAAREWLAWSIAAFVFVIPLMALAAGMDLG CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC IGRLTLMVFG HHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA