Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

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The map label for this gene is secE

Identifier: 213692145

GI number: 213692145

Start: 1468610

End: 1468822

Strand: Direct

Name: secE

Synonym: Blon_1265

Alternate gene names: NA

Gene position: 1468610-1468822 (Clockwise)

Preceding gene: 213692139

Following gene: 213692146

Centisome position: 51.84

GC content: 58.69

Gene sequence:

>213_bases
ATGGAAAGAAAATCGTTGGCATACGACCCGTTTCAGCCGATAGGCCGATTCTGCCGGCAGATCGTGGACGAACTGCGCAA
GACCGTGACTCCGGCCGCCCGTGAATGGCTGGCCTGGAGTATCGCCGCATTCGTGTTCGTCATCCCGCTCATGGCATTGG
CCGCGGGCATGGATCTCGGTATCGGCAGACTCACTCTCATGGTGTTCGGATGA

Upstream 100 bases:

>100_bases
TGCTCGCATGGCCCATCCGCCGTTCCTCATGCCAGAACGGTTCCGCCCCTCCCGCGTCGCGGGAGGGGCTTTTCCGTTTT
CCGGACGCATAGGAGCAGGC

Downstream 100 bases:

>100_bases
CGGTCGCACATCCCGTGAACCTTGCCATGCTGATATGGATGGGCATCGCCCTGCTCGCATTTCTTCTCATGAGCGTATGG
ACGGACGATCCGGAGCGTCG

Product: preprotein translocase subunit SecE

Products: NA

Alternate protein names: Preprotein Translocase Subunit SecE; Protein Translocase Subunit SecE; Protein Translocase Subunit

Number of amino acids: Translated: 70; Mature: 70

Protein sequence:

>70_residues
MERKSLAYDPFQPIGRFCRQIVDELRKTVTPAAREWLAWSIAAFVFVIPLMALAAGMDLGIGRLTLMVFG

Sequences:

>Translated_70_residues
MERKSLAYDPFQPIGRFCRQIVDELRKTVTPAAREWLAWSIAAFVFVIPLMALAAGMDLGIGRLTLMVFG
>Mature_70_residues
MERKSLAYDPFQPIGRFCRQIVDELRKTVTPAAREWLAWSIAAFVFVIPLMALAAGMDLGIGRLTLMVFG

Specific function: Unknown

COG id: COG0690

COG function: function code U; Preprotein translocase subunit SecE

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7858; Mature: 7858

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERKSLAYDPFQPIGRFCRQIVDELRKTVTPAAREWLAWSIAAFVFVIPLMALAAGMDLG
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
IGRLTLMVFG
HHHHHHHCCC
>Mature Secondary Structure
MERKSLAYDPFQPIGRFCRQIVDELRKTVTPAAREWLAWSIAAFVFVIPLMALAAGMDLG
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
IGRLTLMVFG
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA