| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692130
Identifier: 213692130
GI number: 213692130
Start: 1435709
End: 1438078
Strand: Reverse
Name: 213692130
Synonym: Blon_1250
Alternate gene names: NA
Gene position: 1438078-1435709 (Counterclockwise)
Preceding gene: 213692132
Following gene: 213692129
Centisome position: 50.77
GC content: 72.24
Gene sequence:
>2370_bases ATGTGGTTCGAACTGGTTCCCGCGCCGCGCGCGGATGAGACGGATGATGATGCGGGGTTCCAGCGTGACGCGAAGGCCAT GGCCGACGCGATCGGCTTGTCGTCGCGTCCCGGATGGCTGGACTGGTGGAGGCATGACGACGGGTGCCGTCTGGTGGCGG CCGGGGAACGCCGGTGGGTGGAGGTGTCCGACCGGTATGGGCAGAAGGCGGGCGAACTGGTAGCGCGTGCGGCGAACGCG TCGATCCGCGCGTGCGGGCGGCCGGACGTGCTGGACCGTCCTCGTGTGTGGGCGCACGCGTTCGTGCCGATCAGCGCGTC CCTGGCGCGTACGGCGCGCGACGGGGAGCCGAGCCTGGAACGTCCCCGCCTGGATGCGGGCGAGGACACGGTGATCGTGG TGAACGTGCGCCGGCTCGGCTGGGTCGAGTCGGGCCGCCTGTCGGACTGGCTGGGCGACGAGTACAACATGCAGGCGGAC ACGTCGAAGCTCAGGGGCGAGGGGTTGGGCGCGTGCCGTGTGATGGCGGGCGGCGCGGATCCGCGTACGGCGATGGATCA GGCGAAGCGGGCGGCGAACGCGTTGAACCTGGGGCTGGTGCCGGGCCTGTCCGCGCATGTGAGCCGTCCCGGCCTGGGGT TCCTTCTGTGCATGCTCCTCCTGACGGTCGTGTCCGTGCCGGCCGTCATGCTCCCGTCCATGACGGCCGGCTGGCTCATG GCCGTGCCTCTGCTCATGCTCGCCATGACGGCGGGGGCGACGGTCCGCTGGCGTCTGCGCCGTGATCCCGTGAACGACCT GTCCCAGAGGCCCCGTCATTACTGGTGGCGTGCGCGCAGACGGTGGGCGCGCGCCGCCGACCTGAAGACCCGGATGGCGG GCGACGATCAGAACGCGGACGGGCCGGGCCGGAAGCGCCGCGTCCACGCGTACGCGTTCCAACGGTCCACGCTGCCGTTG CCGTGCGGCGCGCTGGCCGCCCTGGCGGCCCCGTCGGGCCGGCGCAACGCGTCGGTGAGCGCGCTGACGGTCATGCCCGA CCAGTTGGACGGGTGCGACGGTCCCGTCCTGGGCGTGGATGCGGAACGGCGCACGGTGCGCATGAGCGTGGACGCGTTGT ACGGCGGCGTGATGCTGATGGGCGAGCCCGGCGGCGGGAAAAGCAACATGATGCATGGGGTGGCCGGGTGGATGGGCGGC CGGCATCGGACGGGCGACGTGCTCGTCGACTTCGAATCGAAGGGCGTGGACGCGCAGCCCGTGCTGAAGCGTCTCATCCC GGGCCTGCTCGTCATCGACGTGAACGATCCGGCAACGCCGATGATCGACCTGCTGGGCGCCGGGTCGAACGTGGAGCGTG CGGGCCGGTTCGCGGATCTCATGCAGGCCGCGTTGGGCGTCCAGCAGATCGGCCCCCAGTCGCGCATCCAGTTGCGTGAC GCGACGTTCGTCGCCCTGGAGGGTCTGGCGGCGGCGGATCTGGGGGCGCGGTGCAACGCGTGCAACGTTCCCGTCCCGTC GGGCTGGGTCGAATATGCGGCGCGCCTTTTGGGCCGTAACGGGGTGATGGACGCGCGCATGCTGGGCCGTGCGAGCGTGT TCGCGTGCGACACGCGTGGGGTTCGGGACGCGGTGGAGCGATTGCATGGCGGCGTGTCGGACAAGGGGACGCCGAAGATC CGCGACGGGGAGCTCGCCGGCCTGCTGCGCGCGCCCATGAACAAGATGGACGTGCTCGCGTCCGCGGGCCGCGTGTTCGC GCCGGGACGGCGCGTCCTGTCCTGGGCGTCCGTGATCCGCCGGTCCGCGCATGCGGGCGACGTGCGCATCATGGTCAACC TGGGCGCCGCGGTCCGGGCCGGCGTGGACGGCCGGCATGCGGATCTGCCGGACGGGGCGCGGCGTCTGATCGGCGCGCTC CTGTTCCGCGGCCTGAAGGACGAGATCGTCGCCTCCTGCGCGGGCTGGCAGGCGCGTGGGCGCGCGGTGCGCGTCCTGGT CGACGAGCTGACGGACGTGTTGGGCGCGGACGGCGACACGGGGGGCGGCAACGCGGACATCCTCGCCTGGCTGCGTGAGA AGGGGCGCGCGTACGGCGTGCAGCTGGTGGCGGGCACGCAGAACGCGGTCCAGTTGGAGGGCGGGCTGCTCGCCTCGGTG ACCGGCCTGATGACGGTCGGCACGTTCGTGTTGCGCGCGGATCTGACGGCGGGCCCGTCCGCCGTGGCGGTCGGGTCGGA TCCGGCGACGGTGCGCGGCCTGCCGTTGCACACGGTGCTGGTGCGCACGGTCGGCCCTCCCCCGGACATGGCGGGCCTGC CTCCCATGATCCTGTCCGTCCCCCATTTCGACGCGGGCGCGCCCGTGTGA
Upstream 100 bases:
>100_bases CCATCATGCGTCCGGCATGCGCGTCGCGGCCCGGTGCCGCGCATGCGCATGCCGGCCTCCTTTCACGCGCGCGTATGCGT TCCGGGGCATAGGGCGGGGC
Downstream 100 bases:
>100_bases CGCATACCCGGGTCGCAAACCGTTGTTTTCGTGTGGAAAGGACATGATGGTGAGGGTATTGGTCGATGCGAGGGAGTTCG CGAACATGGTCGCGCATGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 789; Mature: 789
Protein sequence:
>789_residues MWFELVPAPRADETDDDAGFQRDAKAMADAIGLSSRPGWLDWWRHDDGCRLVAAGERRWVEVSDRYGQKAGELVARAANA SIRACGRPDVLDRPRVWAHAFVPISASLARTARDGEPSLERPRLDAGEDTVIVVNVRRLGWVESGRLSDWLGDEYNMQAD TSKLRGEGLGACRVMAGGADPRTAMDQAKRAANALNLGLVPGLSAHVSRPGLGFLLCMLLLTVVSVPAVMLPSMTAGWLM AVPLLMLAMTAGATVRWRLRRDPVNDLSQRPRHYWWRARRRWARAADLKTRMAGDDQNADGPGRKRRVHAYAFQRSTLPL PCGALAALAAPSGRRNASVSALTVMPDQLDGCDGPVLGVDAERRTVRMSVDALYGGVMLMGEPGGGKSNMMHGVAGWMGG RHRTGDVLVDFESKGVDAQPVLKRLIPGLLVIDVNDPATPMIDLLGAGSNVERAGRFADLMQAALGVQQIGPQSRIQLRD ATFVALEGLAAADLGARCNACNVPVPSGWVEYAARLLGRNGVMDARMLGRASVFACDTRGVRDAVERLHGGVSDKGTPKI RDGELAGLLRAPMNKMDVLASAGRVFAPGRRVLSWASVIRRSAHAGDVRIMVNLGAAVRAGVDGRHADLPDGARRLIGAL LFRGLKDEIVASCAGWQARGRAVRVLVDELTDVLGADGDTGGGNADILAWLREKGRAYGVQLVAGTQNAVQLEGGLLASV TGLMTVGTFVLRADLTAGPSAVAVGSDPATVRGLPLHTVLVRTVGPPPDMAGLPPMILSVPHFDAGAPV
Sequences:
>Translated_789_residues MWFELVPAPRADETDDDAGFQRDAKAMADAIGLSSRPGWLDWWRHDDGCRLVAAGERRWVEVSDRYGQKAGELVARAANA SIRACGRPDVLDRPRVWAHAFVPISASLARTARDGEPSLERPRLDAGEDTVIVVNVRRLGWVESGRLSDWLGDEYNMQAD TSKLRGEGLGACRVMAGGADPRTAMDQAKRAANALNLGLVPGLSAHVSRPGLGFLLCMLLLTVVSVPAVMLPSMTAGWLM AVPLLMLAMTAGATVRWRLRRDPVNDLSQRPRHYWWRARRRWARAADLKTRMAGDDQNADGPGRKRRVHAYAFQRSTLPL PCGALAALAAPSGRRNASVSALTVMPDQLDGCDGPVLGVDAERRTVRMSVDALYGGVMLMGEPGGGKSNMMHGVAGWMGG RHRTGDVLVDFESKGVDAQPVLKRLIPGLLVIDVNDPATPMIDLLGAGSNVERAGRFADLMQAALGVQQIGPQSRIQLRD ATFVALEGLAAADLGARCNACNVPVPSGWVEYAARLLGRNGVMDARMLGRASVFACDTRGVRDAVERLHGGVSDKGTPKI RDGELAGLLRAPMNKMDVLASAGRVFAPGRRVLSWASVIRRSAHAGDVRIMVNLGAAVRAGVDGRHADLPDGARRLIGAL LFRGLKDEIVASCAGWQARGRAVRVLVDELTDVLGADGDTGGGNADILAWLREKGRAYGVQLVAGTQNAVQLEGGLLASV TGLMTVGTFVLRADLTAGPSAVAVGSDPATVRGLPLHTVLVRTVGPPPDMAGLPPMILSVPHFDAGAPV >Mature_789_residues MWFELVPAPRADETDDDAGFQRDAKAMADAIGLSSRPGWLDWWRHDDGCRLVAAGERRWVEVSDRYGQKAGELVARAANA SIRACGRPDVLDRPRVWAHAFVPISASLARTARDGEPSLERPRLDAGEDTVIVVNVRRLGWVESGRLSDWLGDEYNMQAD TSKLRGEGLGACRVMAGGADPRTAMDQAKRAANALNLGLVPGLSAHVSRPGLGFLLCMLLLTVVSVPAVMLPSMTAGWLM AVPLLMLAMTAGATVRWRLRRDPVNDLSQRPRHYWWRARRRWARAADLKTRMAGDDQNADGPGRKRRVHAYAFQRSTLPL PCGALAALAAPSGRRNASVSALTVMPDQLDGCDGPVLGVDAERRTVRMSVDALYGGVMLMGEPGGGKSNMMHGVAGWMGG RHRTGDVLVDFESKGVDAQPVLKRLIPGLLVIDVNDPATPMIDLLGAGSNVERAGRFADLMQAALGVQQIGPQSRIQLRD ATFVALEGLAAADLGARCNACNVPVPSGWVEYAARLLGRNGVMDARMLGRASVFACDTRGVRDAVERLHGGVSDKGTPKI RDGELAGLLRAPMNKMDVLASAGRVFAPGRRVLSWASVIRRSAHAGDVRIMVNLGAAVRAGVDGRHADLPDGARRLIGAL LFRGLKDEIVASCAGWQARGRAVRVLVDELTDVLGADGDTGGGNADILAWLREKGRAYGVQLVAGTQNAVQLEGGLLASV TGLMTVGTFVLRADLTAGPSAVAVGSDPATVRGLPLHTVLVRTVGPPPDMAGLPPMILSVPHFDAGAPV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 83929; Mature: 83929
Theoretical pI: Translated: 9.63; Mature: 9.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWFELVPAPRADETDDDAGFQRDAKAMADAIGLSSRPGWLDWWRHDDGCRLVAAGERRWV CCEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHEECCCCCEEEEECCCEEE EVSDRYGQKAGELVARAANASIRACGRPDVLDRPRVWAHAFVPISASLARTARDGEPSLE EEHHHHCHHHHHHHHHHHCCCEEECCCCCCCCCCCEEEEEEECCHHHHHHHCCCCCCCCC RPRLDAGEDTVIVVNVRRLGWVESGRLSDWLGDEYNMQADTSKLRGEGLGACRVMAGGAD CCCCCCCCCEEEEEEEHHHCCCCCCCCHHHCCCCCCCCCCHHHHCCCCCCEEEEEECCCC PRTAMDQAKRAANALNLGLVPGLSAHVSRPGLGFLLCMLLLTVVSVPAVMLPSMTAGWLM CHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHH AVPLLMLAMTAGATVRWRLRRDPVNDLSQRPRHYWWRARRRWARAADLKTRMAGDDQNAD HHHHHHHHHHCCCEEEEEEECCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC GPGRKRRVHAYAFQRSTLPLPCGALAALAAPSGRRNASVSALTVMPDQLDGCDGPVLGVD CCCCCCEEEEEEEECCCCCCCHHHHHHHHCCCCCCCCCEEEEEECCHHCCCCCCCEEECC AERRTVRMSVDALYGGVMLMGEPGGGKSNMMHGVAGWMGGRHRTGDVLVDFESKGVDAQP CCCCEEEEEHHHHHCCEEEEECCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHH VLKRLIPGLLVIDVNDPATPMIDLLGAGSNVERAGRFADLMQAALGVQQIGPQSRIQLRD HHHHHCCCEEEEECCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHEEECC ATFVALEGLAAADLGARCNACNVPVPSGWVEYAARLLGRNGVMDARMLGRASVFACDTRG CEEEHHCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHCCCEEEEECCCC VRDAVERLHGGVSDKGTPKIRDGELAGLLRAPMNKMDVLASAGRVFAPGRRVLSWASVIR HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHCCCEECCHHHHHHHHHHHH RSAHAGDVRIMVNLGAAVRAGVDGRHADLPDGARRLIGALLFRGLKDEIVASCAGWQARG HCCCCCCEEEEEECCHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCHHCC RAVRVLVDELTDVLGADGDTGGGNADILAWLREKGRAYGVQLVAGTQNAVQLEGGLLASV CCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCEEEEEEEECCCCEEEECCCHHHHH TGLMTVGTFVLRADLTAGPSAVAVGSDPATVRGLPLHTVLVRTVGPPPDMAGLPPMILSV HHHHHHHHHHHEECCCCCCCEEEECCCCCEEECCCHHEEEEEECCCCCCCCCCCHHHEEC PHFDAGAPV CCCCCCCCC >Mature Secondary Structure MWFELVPAPRADETDDDAGFQRDAKAMADAIGLSSRPGWLDWWRHDDGCRLVAAGERRWV CCEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHEECCCCCEEEEECCCEEE EVSDRYGQKAGELVARAANASIRACGRPDVLDRPRVWAHAFVPISASLARTARDGEPSLE EEHHHHCHHHHHHHHHHHCCCEEECCCCCCCCCCCEEEEEEECCHHHHHHHCCCCCCCCC RPRLDAGEDTVIVVNVRRLGWVESGRLSDWLGDEYNMQADTSKLRGEGLGACRVMAGGAD CCCCCCCCCEEEEEEEHHHCCCCCCCCHHHCCCCCCCCCCHHHHCCCCCCEEEEEECCCC PRTAMDQAKRAANALNLGLVPGLSAHVSRPGLGFLLCMLLLTVVSVPAVMLPSMTAGWLM CHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHH AVPLLMLAMTAGATVRWRLRRDPVNDLSQRPRHYWWRARRRWARAADLKTRMAGDDQNAD HHHHHHHHHHCCCEEEEEEECCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC GPGRKRRVHAYAFQRSTLPLPCGALAALAAPSGRRNASVSALTVMPDQLDGCDGPVLGVD CCCCCCEEEEEEEECCCCCCCHHHHHHHHCCCCCCCCCEEEEEECCHHCCCCCCCEEECC AERRTVRMSVDALYGGVMLMGEPGGGKSNMMHGVAGWMGGRHRTGDVLVDFESKGVDAQP CCCCEEEEEHHHHHCCEEEEECCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHH VLKRLIPGLLVIDVNDPATPMIDLLGAGSNVERAGRFADLMQAALGVQQIGPQSRIQLRD HHHHHCCCEEEEECCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHEEECC ATFVALEGLAAADLGARCNACNVPVPSGWVEYAARLLGRNGVMDARMLGRASVFACDTRG CEEEHHCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHCCCEEEEECCCC VRDAVERLHGGVSDKGTPKIRDGELAGLLRAPMNKMDVLASAGRVFAPGRRVLSWASVIR HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHCCCEECCHHHHHHHHHHHH RSAHAGDVRIMVNLGAAVRAGVDGRHADLPDGARRLIGALLFRGLKDEIVASCAGWQARG HCCCCCCEEEEEECCHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCHHCC RAVRVLVDELTDVLGADGDTGGGNADILAWLREKGRAYGVQLVAGTQNAVQLEGGLLASV CCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCEEEEEEEECCCCEEEECCCHHHHH TGLMTVGTFVLRADLTAGPSAVAVGSDPATVRGLPLHTVLVRTVGPPPDMAGLPPMILSV HHHHHHHHHHHEECCCCCCCEEEECCCCCEEECCCHHEEEEEECCCCCCCCCCCHHHEEC PHFDAGAPV CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA