Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

Click here to switch to the map view.

The map label for this gene is 213692110

Identifier: 213692110

GI number: 213692110

Start: 1414770

End: 1415528

Strand: Direct

Name: 213692110

Synonym: Blon_1230

Alternate gene names: NA

Gene position: 1414770-1415528 (Clockwise)

Preceding gene: 213692109

Following gene: 213692112

Centisome position: 49.94

GC content: 60.47

Gene sequence:

>759_bases
ATGGCCGGCAGCTACCTGAAAACCGTGAGGTACAAGTCGGTCCACGGATACCTGTGCCCCGAATGCGGAGGGTTCAAAGG
CGCCGGTTATTGGATGTGCCGCGGCTGCTCACTCATCCACGGCAGTGCATCCGCCCTTGGTGCCGGGCACCTCCTCGCCG
ACCGGCTCGCATTCGGCGTCTACGCCCCGGAACCAAGAAGCCAGTCGTTGAAGATGATGTACGGGTACAAGGACGAGCAT
CCGGCGTCACCCGACTACCGCACGCTCGTCAGGGCGATTCTGGCATTGGGCATAGTCGGACACGGGGATTGCCTGAACGC
GGTCGCCGGAGGATCGCCAGTTGCCTGGGCGATGGTACCATCGACCAGGCAATCACCGCGATACGGGAAACCGCACCCGT
TCCATGAGATAGCCACATCAGTCATGGGAGGTCTGCCCGAGGTGGAAATCACCGCGTCGGAAGGTGAGAAAAGACGCTTC
GACCCGGAGAGGTTCCACATCGAATCCGCACCCGACTTGAATGGGAACGTCCTGCTCCTCGACGACTCATGGGTGACCGG
GGCGAACGCCCAATCGGTCGCCGCATGCCTGAAAACCGCCGGAGCCGAGCAAGTATCGATATACTGCGTCGCCAGGATAG
TCAACTACAACTATCTGGAATCGCTGTCACCGGACGCGGTCGCACTGTTCCAGAAAAACGTGCATTACGCCGGCGGATTC
TGCCCATGGAACAGAACCAGCGAAGCAACGGACGGATGA

Upstream 100 bases:

>100_bases
CGTGCGCTCGAGGAATCCGTGGACATGCTGTTGTCGGCAGGCGCATCGAGGTCGAATGATCAGTAGATACGGATTAGCGC
TTGACCGCGCCATAGACAGC

Downstream 100 bases:

>100_bases
TACGCCACACACGCCCTGGCGCTCGCGGGAGAGGCCGTGGCGTTTTCACATGCGTATCGTGTCGTGCAGCATGTCCTGAT
AATCCCTGACGACCTGCAGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 252; Mature: 251

Protein sequence:

>252_residues
MAGSYLKTVRYKSVHGYLCPECGGFKGAGYWMCRGCSLIHGSASALGAGHLLADRLAFGVYAPEPRSQSLKMMYGYKDEH
PASPDYRTLVRAILALGIVGHGDCLNAVAGGSPVAWAMVPSTRQSPRYGKPHPFHEIATSVMGGLPEVEITASEGEKRRF
DPERFHIESAPDLNGNVLLLDDSWVTGANAQSVAACLKTAGAEQVSIYCVARIVNYNYLESLSPDAVALFQKNVHYAGGF
CPWNRTSEATDG

Sequences:

>Translated_252_residues
MAGSYLKTVRYKSVHGYLCPECGGFKGAGYWMCRGCSLIHGSASALGAGHLLADRLAFGVYAPEPRSQSLKMMYGYKDEH
PASPDYRTLVRAILALGIVGHGDCLNAVAGGSPVAWAMVPSTRQSPRYGKPHPFHEIATSVMGGLPEVEITASEGEKRRF
DPERFHIESAPDLNGNVLLLDDSWVTGANAQSVAACLKTAGAEQVSIYCVARIVNYNYLESLSPDAVALFQKNVHYAGGF
CPWNRTSEATDG
>Mature_251_residues
AGSYLKTVRYKSVHGYLCPECGGFKGAGYWMCRGCSLIHGSASALGAGHLLADRLAFGVYAPEPRSQSLKMMYGYKDEHP
ASPDYRTLVRAILALGIVGHGDCLNAVAGGSPVAWAMVPSTRQSPRYGKPHPFHEIATSVMGGLPEVEITASEGEKRRFD
PERFHIESAPDLNGNVLLLDDSWVTGANAQSVAACLKTAGAEQVSIYCVARIVNYNYLESLSPDAVALFQKNVHYAGGFC
PWNRTSEATDG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27104; Mature: 26973

Theoretical pI: Translated: 7.22; Mature: 7.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGSYLKTVRYKSVHGYLCPECGGFKGAGYWMCRGCSLIHGSASALGAGHLLADRLAFGV
CCCCHHHHHHHHCCCCEECCCCCCCCCCCEEEECCCEEECCCCHHHHHHHHHHHHHHHCC
YAPEPRSQSLKMMYGYKDEHPASPDYRTLVRAILALGIVGHGDCLNAVAGGSPVAWAMVP
CCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHCCCCCEEEEECC
STRQSPRYGKPHPFHEIATSVMGGLPEVEITASEGEKRRFDPERFHIESAPDLNGNVLLL
CCCCCCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCHHHEEECCCCCCCCCEEEE
DDSWVTGANAQSVAACLKTAGAEQVSIYCVARIVNYNYLESLSPDAVALFQKNVHYAGGF
ECCCCCCCCHHHHHHHHHHCCCCCEEHEEHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCC
CPWNRTSEATDG
CCCCCCCCCCCC
>Mature Secondary Structure 
AGSYLKTVRYKSVHGYLCPECGGFKGAGYWMCRGCSLIHGSASALGAGHLLADRLAFGV
CCCHHHHHHHHCCCCEECCCCCCCCCCCEEEECCCEEECCCCHHHHHHHHHHHHHHHCC
YAPEPRSQSLKMMYGYKDEHPASPDYRTLVRAILALGIVGHGDCLNAVAGGSPVAWAMVP
CCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHCCCCCEEEEECC
STRQSPRYGKPHPFHEIATSVMGGLPEVEITASEGEKRRFDPERFHIESAPDLNGNVLLL
CCCCCCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCHHHEEECCCCCCCCCEEEE
DDSWVTGANAQSVAACLKTAGAEQVSIYCVARIVNYNYLESLSPDAVALFQKNVHYAGGF
ECCCCCCCCHHHHHHHHHHCCCCCEEHEEHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCC
CPWNRTSEATDG
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA