Click here to switch to the map view.

The map label for this gene is smf [H]

Identifier: 213692109

GI number: 213692109

Start: 1413725

End: 1414735

Strand: Direct

Name: smf [H]

Synonym: Blon_1229

Alternate gene names: 213692109

Gene position: 1413725-1414735 (Clockwise)

Preceding gene: 213692108

Following gene: 213692110

Centisome position: 49.91

GC content: 62.71

Gene sequence:

>1011_bases
ATGCGGGAGAACGCCGCACTGGTGGCGTTGCTTAACACGATCGACCGGAAGCGCGATTCGTGGTCGTCCATAGCCGAGAC
CGTCGAGCGCAACGGAAGCGCCCTGAAGGTGCTCATGCACGAGATCGACCCGCGTAACAACCCGTTATATGACGACGAGG
ATCCGGATGATTTCGAGAACGGGGAGCCGACCCTGTTCGATGACCGGGACATACCTGTTTCGCGGGCAAGGGCTGCGGAA
CTTGAGTCCGCCTTCGACGCGGCGCTGGACGAAGTGGACTCGTGGGAGCGTCGTGGTCTCGACTTCGTTTCCGTCCTCGA
TGACCGGTATCCGAACAGGCTCCGCCAGGTCGTGGACATGCCACCGTTCCTTTTCGCGGAAGGCCGCATGGTACAGGACG
AGCTTGGCGTCAGTGTGGTCGGTTCCCGGAAGGCCGACGCCGAATCGCTGAAATTCGCGCAGGACACGGCTTCCATGCTG
GTGTCATGTGGGTTCGCCGTCATCGCCGGACTCGCCTCTGGCATAGACACTGCGGCTCATGTCAGGGCTTTGGAGGAAGG
CGGGCGCACGGTCGCGTTCATCGGCACCGGGATCACCAAACGGTATCCCAGGGAGAACGGAACGCTGCAGGACCGCATCG
GACGCGACGGGCTTGTGCTTTCGCAGTTCTGGCCGGACCAGGGGCCGACCAAGTACACGTTCCCGATGCGGAACGCGTCG
ATGAGCGGATACGGTGTGGCCACCGTCGTCGTGCAGGCGTCCGAGCATTCCGGGACCAGGATCCAGGCCCGTCAGGCCCA
GCAGCATGGTCGTCCCGTGATACTCAGGGACACCGTCGCCGACGGGACTGAATGGGGAAGGAAGCTGGCGTCCAGGCCGG
GCGTGTGTGTGGCGTCCACTGTCGACGACGTAAAGGCGAGATTGCATGACCTTCTGGGAATGGGACGTGCGCTCGAGGAA
TCCGTGGACATGCTGTTGTCGGCAGGCGCATCGAGGTCGAATGATCAGTAG

Upstream 100 bases:

>100_bases
GACGGATGCCTCATGACGCGGGATGTAACGTTCCGATATTAGAATGGGGAGACCGGTGAGATGCATGGGAGCGTGGCAGA
TGTCTGACGATGAGGGTTTG

Downstream 100 bases:

>100_bases
ATACGGATTAGCGCTTGACCGCGCCATAGACAGCATGGCCGGCAGCTACCTGAAAACCGTGAGGTACAAGTCGGTCCACG
GATACCTGTGCCCCGAATGC

Product: SMF family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 336; Mature: 336

Protein sequence:

>336_residues
MRENAALVALLNTIDRKRDSWSSIAETVERNGSALKVLMHEIDPRNNPLYDDEDPDDFENGEPTLFDDRDIPVSRARAAE
LESAFDAALDEVDSWERRGLDFVSVLDDRYPNRLRQVVDMPPFLFAEGRMVQDELGVSVVGSRKADAESLKFAQDTASML
VSCGFAVIAGLASGIDTAAHVRALEEGGRTVAFIGTGITKRYPRENGTLQDRIGRDGLVLSQFWPDQGPTKYTFPMRNAS
MSGYGVATVVVQASEHSGTRIQARQAQQHGRPVILRDTVADGTEWGRKLASRPGVCVASTVDDVKARLHDLLGMGRALEE
SVDMLLSAGASRSNDQ

Sequences:

>Translated_336_residues
MRENAALVALLNTIDRKRDSWSSIAETVERNGSALKVLMHEIDPRNNPLYDDEDPDDFENGEPTLFDDRDIPVSRARAAE
LESAFDAALDEVDSWERRGLDFVSVLDDRYPNRLRQVVDMPPFLFAEGRMVQDELGVSVVGSRKADAESLKFAQDTASML
VSCGFAVIAGLASGIDTAAHVRALEEGGRTVAFIGTGITKRYPRENGTLQDRIGRDGLVLSQFWPDQGPTKYTFPMRNAS
MSGYGVATVVVQASEHSGTRIQARQAQQHGRPVILRDTVADGTEWGRKLASRPGVCVASTVDDVKARLHDLLGMGRALEE
SVDMLLSAGASRSNDQ
>Mature_336_residues
MRENAALVALLNTIDRKRDSWSSIAETVERNGSALKVLMHEIDPRNNPLYDDEDPDDFENGEPTLFDDRDIPVSRARAAE
LESAFDAALDEVDSWERRGLDFVSVLDDRYPNRLRQVVDMPPFLFAEGRMVQDELGVSVVGSRKADAESLKFAQDTASML
VSCGFAVIAGLASGIDTAAHVRALEEGGRTVAFIGTGITKRYPRENGTLQDRIGRDGLVLSQFWPDQGPTKYTFPMRNAS
MSGYGVATVVVQASEHSGTRIQARQAQQHGRPVILRDTVADGTEWGRKLASRPGVCVASTVDDVKARLHDLLGMGRALEE
SVDMLLSAGASRSNDQ

Specific function: Unknown

COG id: COG0758

COG function: function code LU; Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the smf family [H]

Homologues:

Organism=Escherichia coli, GI48994932, Length=170, Percent_Identity=32.9411764705882, Blast_Score=90, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003488 [H]

Pfam domain/function: PF02481 DNA_processg_A [H]

EC number: NA

Molecular weight: Translated: 36795; Mature: 36795

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRENAALVALLNTIDRKRDSWSSIAETVERNGSALKVLMHEIDPRNNPLYDDEDPDDFEN
CCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCC
GEPTLFDDRDIPVSRARAAELESAFDAALDEVDSWERRGLDFVSVLDDRYPNRLRQVVDM
CCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCHHHHHHHHCC
PPFLFAEGRMVQDELGVSVVGSRKADAESLKFAQDTASMLVSCGFAVIAGLASGIDTAAH
CCCEECCCCEEHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
VRALEEGGRTVAFIGTGITKRYPRENGTLQDRIGRDGLVLSQFWPDQGPTKYTFPMRNAS
HHHHHHCCCEEEEEECCCHHCCCCCCCCHHHHCCCCCEEEHHCCCCCCCCEEEECCCCCC
MSGYGVATVVVQASEHSGTRIQARQAQQHGRPVILRDTVADGTEWGRKLASRPGVCVAST
CCCCCEEEEEEEECCCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHHHHCCCCEEEEHH
VDDVKARLHDLLGMGRALEESVDMLLSAGASRSNDQ
HHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MRENAALVALLNTIDRKRDSWSSIAETVERNGSALKVLMHEIDPRNNPLYDDEDPDDFEN
CCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCC
GEPTLFDDRDIPVSRARAAELESAFDAALDEVDSWERRGLDFVSVLDDRYPNRLRQVVDM
CCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCHHHHHHHHCC
PPFLFAEGRMVQDELGVSVVGSRKADAESLKFAQDTASMLVSCGFAVIAGLASGIDTAAH
CCCEECCCCEEHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
VRALEEGGRTVAFIGTGITKRYPRENGTLQDRIGRDGLVLSQFWPDQGPTKYTFPMRNAS
HHHHHHCCCEEEEEECCCHHCCCCCCCCHHHHCCCCCEEEHHCCCCCCCCEEEECCCCCC
MSGYGVATVVVQASEHSGTRIQARQAQQHGRPVILRDTVADGTEWGRKLASRPGVCVAST
CCCCCEEEEEEEECCCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHHHHCCCCEEEEHH
VDDVKARLHDLLGMGRALEESVDMLLSAGASRSNDQ
HHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]