Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

Click here to switch to the map view.

The map label for this gene is 213692103

Identifier: 213692103

GI number: 213692103

Start: 1405708

End: 1406625

Strand: Direct

Name: 213692103

Synonym: Blon_1222

Alternate gene names: NA

Gene position: 1405708-1406625 (Clockwise)

Preceding gene: 213692102

Following gene: 213692105

Centisome position: 49.62

GC content: 70.15

Gene sequence:

>918_bases
TTGACGCCCGTCAACGTCTGGGCGTGGACGCTCCTGGGCGTCGCCGTCCGCCCGGCCATACCCGCGTCCATGCGCCGGAT
CGGTCTGATCCGGTCCGGCGCATGGATGGGACGGCACGGTCTCGTCCACGTATCCGCGTGCGCGGCAATCCTCGCCTGGC
TGCTGGGCGCGGACGTGTGGGGGATGCGGCTCGCCTGCCTGACGATCGGCGTCGCCGTCGGCGGCCGGCTCCCGTCCCCG
CCGCATGCGTCCGGACGTCCGGATCGTGACGGGACGGGCGCGAGGAACCTGCCTGGCCGCGTATCATACGGGCCCATGGA
AGACGACGAGATCGAAGTGAGGCCGTTCCTCAAAGACAACGGGCCGTTCGCGGGCATGCCCTCCCGTTTCCTCGGCAGGG
GGTGGAAACGGGTTCCGGACGGGCGCGGACTGCCGGAACGGTCCACGGTCCTTCGTCGGATGGGCCTTGTGTTCGTGGTC
GGCCGGGTCACCGGACTGTTCGCCTGCATCGGTTACGGCCGGCCCGCCGAACATCCGGCGATACGCATGATGGCGACCCG
TATCCTGCCGTATCCGGATTGGACGTGCCGGACGAGGGGCGCGGATCCCGGCATGTTCGCTGACGCGTGCATGCTGCGCT
ACGGGGCCGACGTGCTGACCCGCCTGTCCCGTGACGCATGCGCCAACGCCCATCCGCGTCTGGCGTGCCTGGTCATGCGA
TGCCGTTGCGCCCCGATCCGCCGGGCGTTGGCGCATGCGGATCGTTTCAACCCGCTGATCGGGGCGAACGGCTGGGGCGA
GGACATCGGGCTCGCCTGCGAACTGTATGACGCGACGCTGCGCGAATACGGGCCCGTCGGGGCGGTGCGGCGCCTGGCCG
ATCTGATAGGAGGGTTCCGCAGGACGGTGCGCGGCTGA

Upstream 100 bases:

>100_bases
ACAGGAACCTCCAACTGCGCGCCCTGGGCAACGGGGTCGTGCCCCCGCAGGCCGCCATGGCGGTCGACTGGGCGCTCCGC
GTACGCGAAAGGCTCGCCGT

Downstream 100 bases:

>100_bases
TCCCGGCCATCCTATCGAAGCGTGCCGGGCCCGTCGCCATCCAAGCCCGGCACCCGCATCCCGGCGGCGTCACGTCTTGA
GAGGGGATCGGGATGCGGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 305; Mature: 304

Protein sequence:

>305_residues
MTPVNVWAWTLLGVAVRPAIPASMRRIGLIRSGAWMGRHGLVHVSACAAILAWLLGADVWGMRLACLTIGVAVGGRLPSP
PHASGRPDRDGTGARNLPGRVSYGPMEDDEIEVRPFLKDNGPFAGMPSRFLGRGWKRVPDGRGLPERSTVLRRMGLVFVV
GRVTGLFACIGYGRPAEHPAIRMMATRILPYPDWTCRTRGADPGMFADACMLRYGADVLTRLSRDACANAHPRLACLVMR
CRCAPIRRALAHADRFNPLIGANGWGEDIGLACELYDATLREYGPVGAVRRLADLIGGFRRTVRG

Sequences:

>Translated_305_residues
MTPVNVWAWTLLGVAVRPAIPASMRRIGLIRSGAWMGRHGLVHVSACAAILAWLLGADVWGMRLACLTIGVAVGGRLPSP
PHASGRPDRDGTGARNLPGRVSYGPMEDDEIEVRPFLKDNGPFAGMPSRFLGRGWKRVPDGRGLPERSTVLRRMGLVFVV
GRVTGLFACIGYGRPAEHPAIRMMATRILPYPDWTCRTRGADPGMFADACMLRYGADVLTRLSRDACANAHPRLACLVMR
CRCAPIRRALAHADRFNPLIGANGWGEDIGLACELYDATLREYGPVGAVRRLADLIGGFRRTVRG
>Mature_304_residues
TPVNVWAWTLLGVAVRPAIPASMRRIGLIRSGAWMGRHGLVHVSACAAILAWLLGADVWGMRLACLTIGVAVGGRLPSPP
HASGRPDRDGTGARNLPGRVSYGPMEDDEIEVRPFLKDNGPFAGMPSRFLGRGWKRVPDGRGLPERSTVLRRMGLVFVVG
RVTGLFACIGYGRPAEHPAIRMMATRILPYPDWTCRTRGADPGMFADACMLRYGADVLTRLSRDACANAHPRLACLVMRC
RCAPIRRALAHADRFNPLIGANGWGEDIGLACELYDATLREYGPVGAVRRLADLIGGFRRTVRG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33160; Mature: 33029

Theoretical pI: Translated: 10.85; Mature: 10.85

Prosite motif: PS00615 C_TYPE_LECTIN_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPVNVWAWTLLGVAVRPAIPASMRRIGLIRSGAWMGRHGLVHVSACAAILAWLLGADVW
CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCHHH
GMRLACLTIGVAVGGRLPSPPHASGRPDRDGTGARNLPGRVSYGPMEDDEIEVRPFLKDN
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECEECCC
GPFAGMPSRFLGRGWKRVPDGRGLPERSTVLRRMGLVFVVGRVTGLFACIGYGRPAEHPA
CCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
IRMMATRILPYPDWTCRTRGADPGMFADACMLRYGADVLTRLSRDACANAHPRLACLVMR
HHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
CRCAPIRRALAHADRFNPLIGANGWGEDIGLACELYDATLREYGPVGAVRRLADLIGGFR
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
RTVRG
HHHCC
>Mature Secondary Structure 
TPVNVWAWTLLGVAVRPAIPASMRRIGLIRSGAWMGRHGLVHVSACAAILAWLLGADVW
CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCHHH
GMRLACLTIGVAVGGRLPSPPHASGRPDRDGTGARNLPGRVSYGPMEDDEIEVRPFLKDN
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECEECCC
GPFAGMPSRFLGRGWKRVPDGRGLPERSTVLRRMGLVFVVGRVTGLFACIGYGRPAEHPA
CCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
IRMMATRILPYPDWTCRTRGADPGMFADACMLRYGADVLTRLSRDACANAHPRLACLVMR
HHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
CRCAPIRRALAHADRFNPLIGANGWGEDIGLACELYDATLREYGPVGAVRRLADLIGGFR
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
RTVRG
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA