| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692076
Identifier: 213692076
GI number: 213692076
Start: 1377967
End: 1379280
Strand: Reverse
Name: 213692076
Synonym: Blon_1194
Alternate gene names: NA
Gene position: 1379280-1377967 (Counterclockwise)
Preceding gene: 213692077
Following gene: 213692075
Centisome position: 48.69
GC content: 64.23
Gene sequence:
>1314_bases ATGACGGTAGACAGGAACAACAGGAGCCACAGGCCGAAGGGCCTGCCCCAGGGGGTGGCGGGCACGTTCGACACGATCGG CCCGCAGGCGGCCGGCGACGACATCGTCCCGCCGTCGGCCGGCGGACGTCGGCTGGACGATGCGATGGACGACGCGATGA ACGCGATCATGATGGATCCGGACGTCGCCGCATACGCGGGTTATGCGGCGACCCGCCTGAACCTGCTGGTCGGCCGGCAG GCCATGCCGGACGAAGAGGATGACATGCCGTTGATCGTGGCGAACCTGCGATACGATCCACGGATGCCGGACGGCTCGCA CGCTGACTATGTCATCAACCACATACAGGCCGCCTATGACGGCATACCGGTGAAATCCTATGATCGCGCGCGATTGGAAC AGGAAACCCGGCAACACATCATCGAAACCGCATTGGACCCGAACCGGGAGCTCCGCAATCTCGGATTGGAGCCCGTACGG CCAGACGAACAGGCGGACACGTGGAAGGGACCACAACCAGAGAATTGGGTAAGCGACTACGACGGGGAGGCCGCCGAACG CCGCTACGAAGCCGCATGGAAAGGCACCCAGACCAAACAGGCCCGATATGCTGCGGCAACGGAAGGACATCTGAATCCGT TGAACGATGAGATGCGCGACCTGTACAAGAAGAACGTCGACCGTGGACTGATCAACGGCAGCGCGTTCGATGACAAGATG GCGTTCGCCGACACGCTGCGCGAACTCCAGGAGGACGGCTGGAACCCGCAGGCGGGGCGCGAATACCGGAAATCCAAGGA GTTCAGGAAACTGGAGCAACAACTGTTGGACGGGAGGAAACCGACCCGACGCTACCGGCAGCTGCGCGACGCGTTGTGCG ATGACGAACACGAGTACCGGGCGTTCATGGCCGCGGATCCTGACGTGTTCGACCCGGACGAGAGAATCGTGAAGCCGTTC GCCGGACTCGGCCCCGACGTCGGCCAGGCCGCCATGCTGCGCCTGGCCGCCAAACACCGGGGCGTCACCGGGGCGCTCGC CCTGGCACGCTGGGATCCGGGCATCGAATACGTGACGGCGGACGCGAAGACCCACACGTTCCGCATGGAGCATGACCGGC CGGGAATCGGGCACATGAGCGACGGTAGCACGTATCCGGTGGACCATACGATCATCACGGCGAACGGCGTCAAACCGTCG AGCGTGATGAGCTGGATCTGCCGGGAGAAGCCCGGCTCGCCCGCCTGGGAGCGACGGGCCCGCCGACGGTTCGAGGAGTC GAACGGCGGCGAATGGAAGCCCATCGAGAACTGA
Upstream 100 bases:
>100_bases GTCAACCTGCGTCCAGGAGGATGCAGGCCGGAACATGCGACCCCGCCCCGTATAGCAGGCAGCCGGAACAAGATCCGGTA TTCGTAGAACGGAGACGACC
Downstream 100 bases:
>100_bases CGGGTGAACGCATGCCTTCCCGAATGCGTCCGGGCCCGGCATAGCCGGCCCGCATGATCAGATTCGAATACGAGTACCCC GTCCATGTGAAGACCCGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 437; Mature: 436
Protein sequence:
>437_residues MTVDRNNRSHRPKGLPQGVAGTFDTIGPQAAGDDIVPPSAGGRRLDDAMDDAMNAIMMDPDVAAYAGYAATRLNLLVGRQ AMPDEEDDMPLIVANLRYDPRMPDGSHADYVINHIQAAYDGIPVKSYDRARLEQETRQHIIETALDPNRELRNLGLEPVR PDEQADTWKGPQPENWVSDYDGEAAERRYEAAWKGTQTKQARYAAATEGHLNPLNDEMRDLYKKNVDRGLINGSAFDDKM AFADTLRELQEDGWNPQAGREYRKSKEFRKLEQQLLDGRKPTRRYRQLRDALCDDEHEYRAFMAADPDVFDPDERIVKPF AGLGPDVGQAAMLRLAAKHRGVTGALALARWDPGIEYVTADAKTHTFRMEHDRPGIGHMSDGSTYPVDHTIITANGVKPS SVMSWICREKPGSPAWERRARRRFEESNGGEWKPIEN
Sequences:
>Translated_437_residues MTVDRNNRSHRPKGLPQGVAGTFDTIGPQAAGDDIVPPSAGGRRLDDAMDDAMNAIMMDPDVAAYAGYAATRLNLLVGRQ AMPDEEDDMPLIVANLRYDPRMPDGSHADYVINHIQAAYDGIPVKSYDRARLEQETRQHIIETALDPNRELRNLGLEPVR PDEQADTWKGPQPENWVSDYDGEAAERRYEAAWKGTQTKQARYAAATEGHLNPLNDEMRDLYKKNVDRGLINGSAFDDKM AFADTLRELQEDGWNPQAGREYRKSKEFRKLEQQLLDGRKPTRRYRQLRDALCDDEHEYRAFMAADPDVFDPDERIVKPF AGLGPDVGQAAMLRLAAKHRGVTGALALARWDPGIEYVTADAKTHTFRMEHDRPGIGHMSDGSTYPVDHTIITANGVKPS SVMSWICREKPGSPAWERRARRRFEESNGGEWKPIEN >Mature_436_residues TVDRNNRSHRPKGLPQGVAGTFDTIGPQAAGDDIVPPSAGGRRLDDAMDDAMNAIMMDPDVAAYAGYAATRLNLLVGRQA MPDEEDDMPLIVANLRYDPRMPDGSHADYVINHIQAAYDGIPVKSYDRARLEQETRQHIIETALDPNRELRNLGLEPVRP DEQADTWKGPQPENWVSDYDGEAAERRYEAAWKGTQTKQARYAAATEGHLNPLNDEMRDLYKKNVDRGLINGSAFDDKMA FADTLRELQEDGWNPQAGREYRKSKEFRKLEQQLLDGRKPTRRYRQLRDALCDDEHEYRAFMAADPDVFDPDERIVKPFA GLGPDVGQAAMLRLAAKHRGVTGALALARWDPGIEYVTADAKTHTFRMEHDRPGIGHMSDGSTYPVDHTIITANGVKPSS VMSWICREKPGSPAWERRARRRFEESNGGEWKPIEN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49209; Mature: 49078
Theoretical pI: Translated: 5.28; Mature: 5.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVDRNNRSHRPKGLPQGVAGTFDTIGPQAAGDDIVPPSAGGRRLDDAMDDAMNAIMMDP CCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHEECCC DVAAYAGYAATRLNLLVGRQAMPDEEDDMPLIVANLRYDPRMPDGSHADYVINHIQAAYD CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHC GIPVKSYDRARLEQETRQHIIETALDPNRELRNLGLEPVRPDEQADTWKGPQPENWVSDY CCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCHHCCC DGEAAERRYEAAWKGTQTKQARYAAATEGHLNPLNDEMRDLYKKNVDRGLINGSAFDDKM CCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHH AFADTLRELQEDGWNPQAGREYRKSKEFRKLEQQLLDGRKPTRRYRQLRDALCDDEHEYR HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHH AFMAADPDVFDPDERIVKPFAGLGPDVGQAAMLRLAAKHRGVTGALALARWDPGIEYVTA EEEECCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCEEEEC DAKTHTFRMEHDRPGIGHMSDGSTYPVDHTIITANGVKPSSVMSWICREKPGSPAWERRA CCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCHHHHHH RRRFEESNGGEWKPIEN HHHHHHCCCCCCCCCCC >Mature Secondary Structure TVDRNNRSHRPKGLPQGVAGTFDTIGPQAAGDDIVPPSAGGRRLDDAMDDAMNAIMMDP CCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHEECCC DVAAYAGYAATRLNLLVGRQAMPDEEDDMPLIVANLRYDPRMPDGSHADYVINHIQAAYD CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHC GIPVKSYDRARLEQETRQHIIETALDPNRELRNLGLEPVRPDEQADTWKGPQPENWVSDY CCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCHHCCC DGEAAERRYEAAWKGTQTKQARYAAATEGHLNPLNDEMRDLYKKNVDRGLINGSAFDDKM CCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHH AFADTLRELQEDGWNPQAGREYRKSKEFRKLEQQLLDGRKPTRRYRQLRDALCDDEHEYR HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHH AFMAADPDVFDPDERIVKPFAGLGPDVGQAAMLRLAAKHRGVTGALALARWDPGIEYVTA EEEECCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCEEEEC DAKTHTFRMEHDRPGIGHMSDGSTYPVDHTIITANGVKPSSVMSWICREKPGSPAWERRA CCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCHHHHHH RRRFEESNGGEWKPIEN HHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA