| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
Click here to switch to the map view.
The map label for this gene is 213692055
Identifier: 213692055
GI number: 213692055
Start: 1359793
End: 1360140
Strand: Direct
Name: 213692055
Synonym: Blon_1173
Alternate gene names: NA
Gene position: 1359793-1360140 (Clockwise)
Preceding gene: 213692054
Following gene: 213692056
Centisome position: 48.0
GC content: 61.78
Gene sequence:
>348_bases ATGGCAGAACGTAGCCTCAGGGGCATGAGCATCGGAGCGAAATCGCTGGAGTCCGACGACAACGTCGATTTCGCCGCACG AAACGATGTGGCGTATGTATGCCCGAAGGGCCACCGCACCATCCTGCCGTTTGCCGAGGGTGCCGAAATCCCGGACGAGT GGGAGTGCCGTTGTGGTTCCGTGGCCCACCGTGAGGGCGACGCCGACCGTGAGGGCGACGAAATCAGCAAACCCACCCGC ACCCACTGGGACATGCTGCTGGAACGCCGTAGCGAAGAGGAACTGGCCACCCTGCTCGAAAAGCGCCTGCAAATGCACCG TGACGGTTGGATTCCCGACTATGAGTGA
Upstream 100 bases:
>100_bases CGGGAGTTTGTCAGCCGACGTCGGAAGCTTGGAATAGCGGCCAAGTCCGAACGGTTGCGTAAATTAGTAGGGTTAAAGAT CTTTCAAGGAGGATGCCGAT
Downstream 100 bases:
>100_bases TCTCCTACTGAACAACACGTGAACTTTATGCCCAGTCATCCCGACTGGGCATAATCATTGTTGGAACAAGTCGCATATTG TTTGACGACCATTCAAAGCA
Product: narrowly conserved hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 115; Mature: 114
Protein sequence:
>115_residues MAERSLRGMSIGAKSLESDDNVDFAARNDVAYVCPKGHRTILPFAEGAEIPDEWECRCGSVAHREGDADREGDEISKPTR THWDMLLERRSEEELATLLEKRLQMHRDGWIPDYE
Sequences:
>Translated_115_residues MAERSLRGMSIGAKSLESDDNVDFAARNDVAYVCPKGHRTILPFAEGAEIPDEWECRCGSVAHREGDADREGDEISKPTR THWDMLLERRSEEELATLLEKRLQMHRDGWIPDYE >Mature_114_residues AERSLRGMSIGAKSLESDDNVDFAARNDVAYVCPKGHRTILPFAEGAEIPDEWECRCGSVAHREGDADREGDEISKPTRT HWDMLLERRSEEELATLLEKRLQMHRDGWIPDYE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13174; Mature: 13043
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAERSLRGMSIGAKSLESDDNVDFAARNDVAYVCPKGHRTILPFAEGAEIPDEWECRCGS CCCCCCCCCCCCCCCCCCCCCCCEEECCCEEEECCCCCEEECCCCCCCCCCCCCCCCCCC VAHREGDADREGDEISKPTRTHWDMLLERRSEEELATLLEKRLQMHRDGWIPDYE CCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure AERSLRGMSIGAKSLESDDNVDFAARNDVAYVCPKGHRTILPFAEGAEIPDEWECRCGS CCCCCCCCCCCCCCCCCCCCCCEEECCCEEEECCCCCEEECCCCCCCCCCCCCCCCCCC VAHREGDADREGDEISKPTRTHWDMLLERRSEEELATLLEKRLQMHRDGWIPDYE CCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA