Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

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The map label for this gene is yebC [C]

Identifier: 213692037

GI number: 213692037

Start: 1337607

End: 1338362

Strand: Direct

Name: yebC [C]

Synonym: Blon_1155

Alternate gene names: 213692037

Gene position: 1337607-1338362 (Clockwise)

Preceding gene: 213692036

Following gene: 213692038

Centisome position: 47.22

GC content: 62.7

Gene sequence:

>756_bases
ATGTCAGGTCATTCCAAGTGGGCGACCACCAAGCACAAGAAGGCCGCCATCGACGCCAAGCGCGGCAAGCTCTTCGCCAA
GCTCATCAAGAACATCGAAATCGCCGCCCGCCTCGGCGGTGGCGACCCAGACGGCAACCCGTCCCTGTACGACGCCATCT
ACAAGGCCAAGAAGGCTTCCATGCCGGCCGACAACATCGCCCGTGCCGTCAAGCGTGGTGCCGGTGACGAAGACGGTGCC
GCCAACTACGAGGACATCGTCTACGAGGGCTACGCTCCCGCTGGCGTGGGCCTCATCATCGAGTGCCTGACCGACAACCG
CAACCGTGCGGCCGCCGAAGTGCGTTCCACCCTGACCAAGGGCAACGGCTCCCTGGCCACCTCCGGCTCCGTGTCCTTCA
ACTTTGAGCGCAAGGGCCAGATCGTGGTTCCGTCCGAAGGCGTGGACTTCGACAAGCTGTTCGAGACCGCAGCCGAGGCT
GGCGCCGAGGATGTCACCGATGACGATGAGGTCTACACCGTCATCACCGGCCCGTCCGATCTGTTCACCGTGCGCAAGGC
TCTGCAGGACGCCGGTTTCGACTACGATTCCGCCGACCAGGTCATGCAGCCGAAGAACGAGGTCGAGCTGAGCCTCGAAG
ACGCCCGCAAGGTGTCCAAGCTCATCGACAACCTCGATGATCTCGACGATGTGCAGAACATCTACTCCAACTGGACCGCC
TCCGACGAGGTGATGGCCCAGCTCGACGAGGAGTAA

Upstream 100 bases:

>100_bases
CATGATTCAAAAAGACAATCGAAAACATCACGGGTATGTCTGATTAACGGCCTACAATCGTTTCGTTTGACATCATCCGT
TTATTACTGCTAGGAGCATT

Downstream 100 bases:

>100_bases
TCCTCGTGATCATCCTCGGCGTCGACCCCGGGCTCACGCGCTGCGGGGTCGGCGTGATCGAAGCCGGCGAGCACCGCCGG
CTTTCGTTTATTCACGTGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 250

Protein sequence:

>251_residues
MSGHSKWATTKHKKAAIDAKRGKLFAKLIKNIEIAARLGGGDPDGNPSLYDAIYKAKKASMPADNIARAVKRGAGDEDGA
ANYEDIVYEGYAPAGVGLIIECLTDNRNRAAAEVRSTLTKGNGSLATSGSVSFNFERKGQIVVPSEGVDFDKLFETAAEA
GAEDVTDDDEVYTVITGPSDLFTVRKALQDAGFDYDSADQVMQPKNEVELSLEDARKVSKLIDNLDDLDDVQNIYSNWTA
SDEVMAQLDEE

Sequences:

>Translated_251_residues
MSGHSKWATTKHKKAAIDAKRGKLFAKLIKNIEIAARLGGGDPDGNPSLYDAIYKAKKASMPADNIARAVKRGAGDEDGA
ANYEDIVYEGYAPAGVGLIIECLTDNRNRAAAEVRSTLTKGNGSLATSGSVSFNFERKGQIVVPSEGVDFDKLFETAAEA
GAEDVTDDDEVYTVITGPSDLFTVRKALQDAGFDYDSADQVMQPKNEVELSLEDARKVSKLIDNLDDLDDVQNIYSNWTA
SDEVMAQLDEE
>Mature_250_residues
SGHSKWATTKHKKAAIDAKRGKLFAKLIKNIEIAARLGGGDPDGNPSLYDAIYKAKKASMPADNIARAVKRGAGDEDGAA
NYEDIVYEGYAPAGVGLIIECLTDNRNRAAAEVRSTLTKGNGSLATSGSVSFNFERKGQIVVPSEGVDFDKLFETAAEAG
AEDVTDDDEVYTVITGPSDLFTVRKALQDAGFDYDSADQVMQPKNEVELSLEDARKVSKLIDNLDDLDDVQNIYSNWTAS
DEVMAQLDEE

Specific function: Unknown

COG id: COG0217

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TACO1 family

Homologues:

Organism=Homo sapiens, GI27545315, Length=246, Percent_Identity=33.739837398374, Blast_Score=132, Evalue=4e-31,
Organism=Escherichia coli, GI1788171, Length=249, Percent_Identity=50.6024096385542, Blast_Score=232, Evalue=2e-62,
Organism=Escherichia coli, GI1788294, Length=237, Percent_Identity=38.3966244725738, Blast_Score=134, Evalue=7e-33,
Organism=Caenorhabditis elegans, GI17556100, Length=246, Percent_Identity=25.2032520325203, Blast_Score=67, Evalue=6e-12,
Organism=Saccharomyces cerevisiae, GI6321458, Length=264, Percent_Identity=32.9545454545455, Blast_Score=118, Evalue=8e-28,
Organism=Drosophila melanogaster, GI24583305, Length=246, Percent_Identity=29.2682926829268, Blast_Score=92, Evalue=4e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1155_BIFLI (B7GR15)

Other databases:

- EMBL:   CP001095
- RefSeq:   YP_002322623.1
- ProteinModelPortal:   B7GR15
- GeneID:   7053321
- GenomeReviews:   CP001095_GR
- KEGG:   bln:Blon_1155
- HOGENOM:   HBG715231
- ProtClustDB:   PRK00110
- HAMAP:   MF_00693
- InterPro:   IPR002876
- InterPro:   IPR017856
- Gene3D:   G3DSA:1.10.10.200
- PANTHER:   PTHR12532
- TIGRFAMs:   TIGR01033

Pfam domain/function: PF01709 DUF28; SSF75625 DUF28

EC number: NA

Molecular weight: Translated: 27092; Mature: 26961

Theoretical pI: Translated: 4.30; Mature: 4.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGHSKWATTKHKKAAIDAKRGKLFAKLIKNIEIAARLGGGDPDGNPSLYDAIYKAKKAS
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHEEEEECCCCCCCCCHHHHHHHHHHHCC
MPADNIARAVKRGAGDEDGAANYEDIVYEGYAPAGVGLIIECLTDNRNRAAAEVRSTLTK
CCHHHHHHHHHHCCCCCCCCCCHHHHEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHC
GNGSLATSGSVSFNFERKGQIVVPSEGVDFDKLFETAAEAGAEDVTDDDEVYTVITGPSD
CCCCEEECCCEEEEECCCCCEEECCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEECCHH
LFTVRKALQDAGFDYDSADQVMQPKNEVELSLEDARKVSKLIDNLDDLDDVQNIYSNWTA
HHHHHHHHHHCCCCCCCHHHHHCCCHHHEECHHHHHHHHHHHHCCCCHHHHHHHHHCCCC
SDEVMAQLDEE
CHHHHHHHCCC
>Mature Secondary Structure 
SGHSKWATTKHKKAAIDAKRGKLFAKLIKNIEIAARLGGGDPDGNPSLYDAIYKAKKAS
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHEEEEECCCCCCCCCHHHHHHHHHHHCC
MPADNIARAVKRGAGDEDGAANYEDIVYEGYAPAGVGLIIECLTDNRNRAAAEVRSTLTK
CCHHHHHHHHHHCCCCCCCCCCHHHHEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHC
GNGSLATSGSVSFNFERKGQIVVPSEGVDFDKLFETAAEAGAEDVTDDDEVYTVITGPSD
CCCCEEECCCEEEEECCCCCEEECCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEECCHH
LFTVRKALQDAGFDYDSADQVMQPKNEVELSLEDARKVSKLIDNLDDLDDVQNIYSNWTA
HHHHHHHHHHCCCCCCCHHHHHCCCHHHEECHHHHHHHHHHHHCCCCHHHHHHHHHCCCC
SDEVMAQLDEE
CHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA