| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692034
Identifier: 213692034
GI number: 213692034
Start: 1333185
End: 1334042
Strand: Reverse
Name: 213692034
Synonym: Blon_1152
Alternate gene names: NA
Gene position: 1334042-1333185 (Counterclockwise)
Preceding gene: 213692047
Following gene: 213692032
Centisome position: 47.09
GC content: 54.31
Gene sequence:
>858_bases ATGAACTCCAGTTACTCTAGAGGTATGAGTGAAGCAGCGAAGGACACCGGCGCAGTATTGATCGCCGCATTCGAGGGATG GAATGATGCCTGTCAGGCGGCGACGAACGTGGTGCGCCATCTGGTCAAGCGATATGAGTCCCGCGAGATTCGTCATATCC GTTGTGATGATTTCTATGACTACCAGGTTGCCCGTCCTATGCTGTGCCATGTTTCGGGACGCACCAATCTTATCTGGCCG CAGACCACGTTCTACGACATCATGTTGGACGCAGGAAAGCATATCTATGCGCAGATCGCCCCTGAACCGAACTATCGGTG GAAGGAATACTGTAGCCAGAGTCTGGCCATCGCCGATGAGCTGGATGTCAATCGAATCATTACGTTAGGTTCGATGTTCT CCGATTGCCCGCATACTCGGCCGTTGCCCATCGCCGTCAGCGACGGAGACTGTCAGTGCGAAGGAGACCGGTCGTATAAC GGCCCGGTGGGCATTCCTACTGTTCTGGATGTGGCCGCCGCGCAGCAAGGCTTTGCTCATTCCTCAATGTGGGTGTCCAT CCCCCAATATTTGGGCAGCGACGAATGTTCTGCCGGCACTATGCGATTGCTGGATGCGTTGGGCAAGCATATCGGCTTCA CCTTCGATACGGCAGATCTGAAGCAGAAAGCCGAACAGTGGAAGGCTCAGGCATCGATACTGGTTCGTTGTAATGACCAG CTTCATGATTATGTGGAGCATTTGGAGCACGACTACGACTTGCAGCAGAAAGCCGAGGCGGAGGCTTCTTTGGGAGCGCC CCAGGCCGAACAACTGGTCAAAGAAGCGGAAGCATTTCTGCGCCAGATGGGTAATTAG
Upstream 100 bases:
>100_bases CGAGTGTTTACTATACACACATGCGTGTAGTTCGTCCAGCTGCGGCGTGTCGCCTGTAATTGCATACTCTCGCTTATGGC TAAAGCGTGCGCTTCAGGCA
Downstream 100 bases:
>100_bases CCCATATATGGTGATGCTCCCGCTGGATGAACAGCCCACAGGGCTGTTCATCCAGCGGGAGCATGTGCACGTCGCACAAA ATGTCGGGAGCTGGCTCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 285; Mature: 285
Protein sequence:
>285_residues MNSSYSRGMSEAAKDTGAVLIAAFEGWNDACQAATNVVRHLVKRYESREIRHIRCDDFYDYQVARPMLCHVSGRTNLIWP QTTFYDIMLDAGKHIYAQIAPEPNYRWKEYCSQSLAIADELDVNRIITLGSMFSDCPHTRPLPIAVSDGDCQCEGDRSYN GPVGIPTVLDVAAAQQGFAHSSMWVSIPQYLGSDECSAGTMRLLDALGKHIGFTFDTADLKQKAEQWKAQASILVRCNDQ LHDYVEHLEHDYDLQQKAEAEASLGAPQAEQLVKEAEAFLRQMGN
Sequences:
>Translated_285_residues MNSSYSRGMSEAAKDTGAVLIAAFEGWNDACQAATNVVRHLVKRYESREIRHIRCDDFYDYQVARPMLCHVSGRTNLIWP QTTFYDIMLDAGKHIYAQIAPEPNYRWKEYCSQSLAIADELDVNRIITLGSMFSDCPHTRPLPIAVSDGDCQCEGDRSYN GPVGIPTVLDVAAAQQGFAHSSMWVSIPQYLGSDECSAGTMRLLDALGKHIGFTFDTADLKQKAEQWKAQASILVRCNDQ LHDYVEHLEHDYDLQQKAEAEASLGAPQAEQLVKEAEAFLRQMGN >Mature_285_residues MNSSYSRGMSEAAKDTGAVLIAAFEGWNDACQAATNVVRHLVKRYESREIRHIRCDDFYDYQVARPMLCHVSGRTNLIWP QTTFYDIMLDAGKHIYAQIAPEPNYRWKEYCSQSLAIADELDVNRIITLGSMFSDCPHTRPLPIAVSDGDCQCEGDRSYN GPVGIPTVLDVAAAQQGFAHSSMWVSIPQYLGSDECSAGTMRLLDALGKHIGFTFDTADLKQKAEQWKAQASILVRCNDQ LHDYVEHLEHDYDLQQKAEAEASLGAPQAEQLVKEAEAFLRQMGN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31872; Mature: 31872
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSSYSRGMSEAAKDTGAVLIAAFEGWNDACQAATNVVRHLVKRYESREIRHIRCDDFYD CCCCHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCC YQVARPMLCHVSGRTNLIWPQTTFYDIMLDAGKHIYAQIAPEPNYRWKEYCSQSLAIADE HHHHCCCEEEECCCCCEECCCHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHH LDVNRIITLGSMFSDCPHTRPLPIAVSDGDCQCEGDRSYNGPVGIPTVLDVAAAQQGFAH CCHHHHHHHHHHHHCCCCCCCCEEEECCCCCEECCCCCCCCCCCCHHHHHHHHHHHCCCC SSMWVSIPQYLGSDECSAGTMRLLDALGKHIGFTFDTADLKQKAEQWKAQASILVRCNDQ CHHHEEHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEEEEECHH LHDYVEHLEHDYDLQQKAEAEASLGAPQAEQLVKEAEAFLRQMGN HHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNSSYSRGMSEAAKDTGAVLIAAFEGWNDACQAATNVVRHLVKRYESREIRHIRCDDFYD CCCCHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCC YQVARPMLCHVSGRTNLIWPQTTFYDIMLDAGKHIYAQIAPEPNYRWKEYCSQSLAIADE HHHHCCCEEEECCCCCEECCCHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHH LDVNRIITLGSMFSDCPHTRPLPIAVSDGDCQCEGDRSYNGPVGIPTVLDVAAAQQGFAH CCHHHHHHHHHHHHCCCCCCCCEEEECCCCCEECCCCCCCCCCCCHHHHHHHHHHHCCCC SSMWVSIPQYLGSDECSAGTMRLLDALGKHIGFTFDTADLKQKAEQWKAQASILVRCNDQ CHHHEEHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEEEEECHH LHDYVEHLEHDYDLQQKAEAEASLGAPQAEQLVKEAEAFLRQMGN HHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA