Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

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The map label for this gene is 213692010

Identifier: 213692010

GI number: 213692010

Start: 1315269

End: 1317551

Strand: Reverse

Name: 213692010

Synonym: Blon_1128

Alternate gene names: NA

Gene position: 1317551-1315269 (Counterclockwise)

Preceding gene: 213692011

Following gene: 213692009

Centisome position: 46.51

GC content: 60.84

Gene sequence:

>2283_bases
ATGACCGACATCTACGGATACGCGGCAGCCGCACCCCTGTACCGTGCGGCTGGATGGATGCAGGTCATCCCCCTGCCGGA
AGGCCACAAGACCCCGCCGCCCAGCGGTTTCACGGGACGCAGCCGCAAACCCGTCACCGACGAACAAGTACAGGTCTGGT
CTCAGGCGACCCCGAACGCGAACACGGGCATCGTCATACCAGAAGGCGTGCTCGTGTTGGACATCGACGCGGAGCAGGGC
CATCGGGTCAAGGCGGACGGGGCGAAAGGCATCAGCGAGCTCTCGCAGGAACTGGGCGCATTGCCGGCCACGTGGAGCAG
CACGGCGCACGGCATCGACTCGCCGGCACGCCACCTGTTCTACAAGGTGCCCGAAGGGCTCGCGTGGAAGGGCGGTGCAA
TCGAGGGCGTCGACATCCTGCAGCCCGGCCACAGGTACAGCGTGGTCTGGCCGTCGATTCACCCTTCCGGCGAGATGTAC
TGCTGGTACACTCCCAGCGGCTCGACCACCAGCCAGATCCCCCATATCAGCGATCTGGCTACCCTGCCGTGGAAGTGGGT
GGACTACCTGCGCAAACCGGAGCATACGACGCCGAAACCAGCCTTCAATACCCTGATTTCACACGAAACCGGCACATACG
ACACCCGTATGTGCAAAGCCATCAACACATTTTTGAACAAAACGCTGTCAAACCCGGCCAGCAAAGGCAGTCGCCACGAC
ACCACGTTGCAGGCCGTATGGGCATTGGTGAACTTCGCGCAGGAAGGCCATCGCGGCGCGCTCGACGCCATCAACCAGCT
CAAACCACGGTTCATCGCCGAGATAGCACCCGACCGTCCGGGCAAGGAGCGTGAGGCGGCACGCGAATGGGCGGCGATAC
TCTCCGGCGCGATGGAGAAGGTCAACGGCATACAGTCGCACGCGGACCCGTGCGAACAGTCGAAAATCGAACGCATGCTG
CCCGGCGAGTTCAACGAACTCACCCAAAACACGATTGCGAATCAAATGGGGGAAAGTCACCCACAGCAGGTTCAAAACGT
TGGAACGACGCCGGTTCAAACCGGTTCAACCACCGCATCTCAGGTTCAAAACGGTTCAACGGAAAGTTACGAGGCAAATA
AAACCTCCTCCAGTTGGCGGTTCGAGGACCTCACCCAGTTGGCGTCCGGCGTCGAACTGCCGCCAACGCCAACCGTGTTC
CAACGCGAGGACGGCCAAGGACTCTTCTACCGTGGCGCGGTCAACGACCTGCACGGCGAACCCGGCTGCGGCAAAAGCAT
GATCGCCCAGATAGCCGCCGCACAGGAACTCAAGAGTAGCCATGATGTCATCTACATCGATTATGAGGACAGCGCCAGAA
ACGTGGTCAAACGCCTCCTGCTGCTCGGCGTGACCGGCGAGCAGATAGTGGCTCACTTCCACTACGTGCGCCCCAGCGCC
AAGCCTAGCAGCCCCACCAGCCTCGACGGCTGGCGCGAGACCCTCGGCTACGCCGACACCGCCACGCTCACCGTCATCGA
CGGCGTCACCAGCTGCCTCGCCTATGCAGGACTCGACTCGAATTCCGGTGACGACATCGCCGCCTGGTACAACACCATGC
CCCGACTCATATTGGCCTGCGGACCCGCCGTCGTATTGATAGACCACGTCGTCAAGTCAAAGGACAACCGCGGCCGGTAC
GCCGGAGGCAGCATGCAGAAACTCGCATTGATCGACGGCATCAGCTACTCGGCGAACATGACCAAGCCAGTCGGCAAAGG
CGTACGCGGCACCATCGTCATCAAAAGCGGCAAGGACCGCATCAGTGAAATCGAGGAGCACTGCGCCGTCAGTTGGGATT
CGAACGGCTCGCACCTGCGCGAAGCAGCACGCATCGAAATCAACAGCACGAACCCGAAACTCATGCACGTCACCATCGCA
CGACCCAACATGATGCCCAGCGAGGACCGTCAGACGAAACGCGACGACTTCCGACCCACCGGACTCATGGAGAAAATCAG
TCAGCTCGTCGAGAACGCCATAGAGGAACCAAGCCAATCGGAACTGTTCGACGCCTTGAAATCGGATGGCTCCGGCGCCA
AGACCGCGATTATGTCGAAAGCCATCAGACTGCTGCTGGAGGAGGGGTATGTGACGAACCGCGCCAGCAGACACAACCGC
GCATGCTACCGGTCGGCACGCCCCTACCGGCAGATAGACGACCCAAAGTCGGATTCTTTCGTGGACCGTATGAGCAGGGA
GGAGGTGAGCGAATTGGACGATGGGAACCACCTCGACATCTAG

Upstream 100 bases:

>100_bases
TCCAGTCCCGACCGCCGTAGCCGTATCCAAGCGGCCGGCACGCATGCAAAGGCGTGCACGGCACCACACATATTCACATC
ACGTCAAAGGAGTTTCAAGG

Downstream 100 bases:

>100_bases
ATTTTCCGTTTTTCCCGAACGTTTCCCAGCTCTTCCCAAAAAAACTGAGCCACCGAGACTAGCTCTTCCCCACACTCCCC
GACCACACTACGTGTGTGGT

Product: pancreatic ribonuclease

Products: NA

Alternate protein names: Phage/Plasmid Primase; Pancreatic Ribonuclease

Number of amino acids: Translated: 760; Mature: 759

Protein sequence:

>760_residues
MTDIYGYAAAAPLYRAAGWMQVIPLPEGHKTPPPSGFTGRSRKPVTDEQVQVWSQATPNANTGIVIPEGVLVLDIDAEQG
HRVKADGAKGISELSQELGALPATWSSTAHGIDSPARHLFYKVPEGLAWKGGAIEGVDILQPGHRYSVVWPSIHPSGEMY
CWYTPSGSTTSQIPHISDLATLPWKWVDYLRKPEHTTPKPAFNTLISHETGTYDTRMCKAINTFLNKTLSNPASKGSRHD
TTLQAVWALVNFAQEGHRGALDAINQLKPRFIAEIAPDRPGKEREAAREWAAILSGAMEKVNGIQSHADPCEQSKIERML
PGEFNELTQNTIANQMGESHPQQVQNVGTTPVQTGSTTASQVQNGSTESYEANKTSSSWRFEDLTQLASGVELPPTPTVF
QREDGQGLFYRGAVNDLHGEPGCGKSMIAQIAAAQELKSSHDVIYIDYEDSARNVVKRLLLLGVTGEQIVAHFHYVRPSA
KPSSPTSLDGWRETLGYADTATLTVIDGVTSCLAYAGLDSNSGDDIAAWYNTMPRLILACGPAVVLIDHVVKSKDNRGRY
AGGSMQKLALIDGISYSANMTKPVGKGVRGTIVIKSGKDRISEIEEHCAVSWDSNGSHLREAARIEINSTNPKLMHVTIA
RPNMMPSEDRQTKRDDFRPTGLMEKISQLVENAIEEPSQSELFDALKSDGSGAKTAIMSKAIRLLLEEGYVTNRASRHNR
ACYRSARPYRQIDDPKSDSFVDRMSREEVSELDDGNHLDI

Sequences:

>Translated_760_residues
MTDIYGYAAAAPLYRAAGWMQVIPLPEGHKTPPPSGFTGRSRKPVTDEQVQVWSQATPNANTGIVIPEGVLVLDIDAEQG
HRVKADGAKGISELSQELGALPATWSSTAHGIDSPARHLFYKVPEGLAWKGGAIEGVDILQPGHRYSVVWPSIHPSGEMY
CWYTPSGSTTSQIPHISDLATLPWKWVDYLRKPEHTTPKPAFNTLISHETGTYDTRMCKAINTFLNKTLSNPASKGSRHD
TTLQAVWALVNFAQEGHRGALDAINQLKPRFIAEIAPDRPGKEREAAREWAAILSGAMEKVNGIQSHADPCEQSKIERML
PGEFNELTQNTIANQMGESHPQQVQNVGTTPVQTGSTTASQVQNGSTESYEANKTSSSWRFEDLTQLASGVELPPTPTVF
QREDGQGLFYRGAVNDLHGEPGCGKSMIAQIAAAQELKSSHDVIYIDYEDSARNVVKRLLLLGVTGEQIVAHFHYVRPSA
KPSSPTSLDGWRETLGYADTATLTVIDGVTSCLAYAGLDSNSGDDIAAWYNTMPRLILACGPAVVLIDHVVKSKDNRGRY
AGGSMQKLALIDGISYSANMTKPVGKGVRGTIVIKSGKDRISEIEEHCAVSWDSNGSHLREAARIEINSTNPKLMHVTIA
RPNMMPSEDRQTKRDDFRPTGLMEKISQLVENAIEEPSQSELFDALKSDGSGAKTAIMSKAIRLLLEEGYVTNRASRHNR
ACYRSARPYRQIDDPKSDSFVDRMSREEVSELDDGNHLDI
>Mature_759_residues
TDIYGYAAAAPLYRAAGWMQVIPLPEGHKTPPPSGFTGRSRKPVTDEQVQVWSQATPNANTGIVIPEGVLVLDIDAEQGH
RVKADGAKGISELSQELGALPATWSSTAHGIDSPARHLFYKVPEGLAWKGGAIEGVDILQPGHRYSVVWPSIHPSGEMYC
WYTPSGSTTSQIPHISDLATLPWKWVDYLRKPEHTTPKPAFNTLISHETGTYDTRMCKAINTFLNKTLSNPASKGSRHDT
TLQAVWALVNFAQEGHRGALDAINQLKPRFIAEIAPDRPGKEREAAREWAAILSGAMEKVNGIQSHADPCEQSKIERMLP
GEFNELTQNTIANQMGESHPQQVQNVGTTPVQTGSTTASQVQNGSTESYEANKTSSSWRFEDLTQLASGVELPPTPTVFQ
REDGQGLFYRGAVNDLHGEPGCGKSMIAQIAAAQELKSSHDVIYIDYEDSARNVVKRLLLLGVTGEQIVAHFHYVRPSAK
PSSPTSLDGWRETLGYADTATLTVIDGVTSCLAYAGLDSNSGDDIAAWYNTMPRLILACGPAVVLIDHVVKSKDNRGRYA
GGSMQKLALIDGISYSANMTKPVGKGVRGTIVIKSGKDRISEIEEHCAVSWDSNGSHLREAARIEINSTNPKLMHVTIAR
PNMMPSEDRQTKRDDFRPTGLMEKISQLVENAIEEPSQSELFDALKSDGSGAKTAIMSKAIRLLLEEGYVTNRASRHNRA
CYRSARPYRQIDDPKSDSFVDRMSREEVSELDDGNHLDI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 83162; Mature: 83031

Theoretical pI: Translated: 6.34; Mature: 6.34

Prosite motif: PS00127 RNASE_PANCREATIC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDIYGYAAAAPLYRAAGWMQVIPLPEGHKTPPPSGFTGRSRKPVTDEQVQVWSQATPNA
CCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCC
NTGIVIPEGVLVLDIDAEQGHRVKADGAKGISELSQELGALPATWSSTAHGIDSPARHLF
CCCEEECCCEEEEEECCCCCCEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHH
YKVPEGLAWKGGAIEGVDILQPGHRYSVVWPSIHPSGEMYCWYTPSGSTTSQIPHISDLA
HCCCCCCEECCCCCCCHHHCCCCCCEEEEECCCCCCCCEEEEECCCCCCCCCCCCHHHHH
TLPWKWVDYLRKPEHTTPKPAFNTLISHETGTYDTRMCKAINTFLNKTLSNPASKGSRHD
HCCHHHHHHHHCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHCCCCCH
TTLQAVWALVNFAQEGHRGALDAINQLKPRFIAEIAPDRPGKEREAAREWAAILSGAMEK
HHHHHHHHHHHHHHHCCCHHHHHHHHHCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
VNGIQSHADPCEQSKIERMLPGEFNELTQNTIANQMGESHPQQVQNVGTTPVQTGSTTAS
HHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCHHH
QVQNGSTESYEANKTSSSWRFEDLTQLASGVELPPTPTVFQREDGQGLFYRGAVNDLHGE
HHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCEECCCCCEEEEECCCHHCCCC
PGCGKSMIAQIAAAQELKSSHDVIYIDYEDSARNVVKRLLLLGVTGEQIVAHFHYVRPSA
CCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCC
KPSSPTSLDGWRETLGYADTATLTVIDGVTSCLAYAGLDSNSGDDIAAWYNTMPRLILAC
CCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
GPAVVLIDHVVKSKDNRGRYAGGSMQKLALIDGISYSANMTKPVGKGVRGTIVIKSGKDR
CCHHHHHHHHHHCCCCCCCCCCCCCCEEHEECCCCCCCCCCCHHCCCCEEEEEEECCHHH
ISEIEEHCAVSWDSNGSHLREAARIEINSTNPKLMHVTIARPNMMPSEDRQTKRDDFRPT
HHHHHHHHEECCCCCCHHHHHHHEEEEECCCCEEEEEEEECCCCCCCCHHHHHHHCCCCC
GLMEKISQLVENAIEEPSQSELFDALKSDGSGAKTAIMSKAIRLLLEEGYVTNRASRHNR
HHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHH
ACYRSARPYRQIDDPKSDSFVDRMSREEVSELDDGNHLDI
HHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
TDIYGYAAAAPLYRAAGWMQVIPLPEGHKTPPPSGFTGRSRKPVTDEQVQVWSQATPNA
CCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCC
NTGIVIPEGVLVLDIDAEQGHRVKADGAKGISELSQELGALPATWSSTAHGIDSPARHLF
CCCEEECCCEEEEEECCCCCCEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHH
YKVPEGLAWKGGAIEGVDILQPGHRYSVVWPSIHPSGEMYCWYTPSGSTTSQIPHISDLA
HCCCCCCEECCCCCCCHHHCCCCCCEEEEECCCCCCCCEEEEECCCCCCCCCCCCHHHHH
TLPWKWVDYLRKPEHTTPKPAFNTLISHETGTYDTRMCKAINTFLNKTLSNPASKGSRHD
HCCHHHHHHHHCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHCCCCCH
TTLQAVWALVNFAQEGHRGALDAINQLKPRFIAEIAPDRPGKEREAAREWAAILSGAMEK
HHHHHHHHHHHHHHHCCCHHHHHHHHHCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
VNGIQSHADPCEQSKIERMLPGEFNELTQNTIANQMGESHPQQVQNVGTTPVQTGSTTAS
HHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCHHH
QVQNGSTESYEANKTSSSWRFEDLTQLASGVELPPTPTVFQREDGQGLFYRGAVNDLHGE
HHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCEECCCCCEEEEECCCHHCCCC
PGCGKSMIAQIAAAQELKSSHDVIYIDYEDSARNVVKRLLLLGVTGEQIVAHFHYVRPSA
CCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCC
KPSSPTSLDGWRETLGYADTATLTVIDGVTSCLAYAGLDSNSGDDIAAWYNTMPRLILAC
CCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
GPAVVLIDHVVKSKDNRGRYAGGSMQKLALIDGISYSANMTKPVGKGVRGTIVIKSGKDR
CCHHHHHHHHHHCCCCCCCCCCCCCCEEHEECCCCCCCCCCCHHCCCCEEEEEEECCHHH
ISEIEEHCAVSWDSNGSHLREAARIEINSTNPKLMHVTIARPNMMPSEDRQTKRDDFRPT
HHHHHHHHEECCCCCCHHHHHHHEEEEECCCCEEEEEEEECCCCCCCCHHHHHHHCCCCC
GLMEKISQLVENAIEEPSQSELFDALKSDGSGAKTAIMSKAIRLLLEEGYVTNRASRHNR
HHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHH
ACYRSARPYRQIDDPKSDSFVDRMSREEVSELDDGNHLDI
HHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA