Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

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The map label for this gene is 213691933

Identifier: 213691933

GI number: 213691933

Start: 1230918

End: 1231607

Strand: Direct

Name: 213691933

Synonym: Blon_1049

Alternate gene names: NA

Gene position: 1230918-1231607 (Clockwise)

Preceding gene: 213691932

Following gene: 213691936

Centisome position: 43.45

GC content: 58.26

Gene sequence:

>690_bases
ATGAATGCACCACTGTTGTTTGATTGGCGTCGCGACGAAGCCCGACGTGCCAGCAGGCGGCGTCAGCAGGCGCGTCAGCG
GGCTCAAGAACGGCAACGGCGTATGGATGCCATAATCGCGTTGGCCGCCGTTATCGGCCTGCTGCTTGCCTTGGGAGTAG
GACTGGCATCCACGCCTCAGCATGTTGCGCATGCGGATACTGCGGTGACCGGAGATGCAGCATACACGGTGGAGGATTTC
ACCGATATGTCTGATTTGGCGTGGCGCAATGGCAATCAGTGCGAATCCCGGTTCGACTGGCCGGTCGACGATCCACAGGT
CGAACAACAGTTCGAGCGGCCGATCAACCCGTGGGCACCAGGTCATCGTGGCGTGGATCTTGTTGCGGAGCAAGGTACCG
TAATTCTGTCACCACAGGCAGGGACCGTGAGTTTTGCTGGCAAAGTAGCTGGCAAAGATGTGGTGAGTGTACGGCATCGT
GGAGGTGTCACGTCAACATTCGAACCGGCTGTTACCGAGCTCTCGGTGGGGGATACGATCTCCCGCAGACAGCCCGTAGG
CATCGTTGAGGGCAACTCGGACCATTGCGAAGACCGTTGCCTGCATTGGGGCCTCAAGCGAGGAACAGCCGACTATCTTG
ACCCACAGCAATATGCGGGGAGTCGAAAAATCGTACTGAAGCCGTCATGA

Upstream 100 bases:

>100_bases
GGTCGTTCTGGCTGGACATCCTGTTTCGGACCCCTCAAGGTGGGTATCACCGGCAAAGAAGCCGGAATCACATCACACTC
ACACTATGGGGAGGAATCTC

Downstream 100 bases:

>100_bases
TTCAGCAATGTTTGTCGGCCGGAACAGGGCCGTACGGAAGAGGCATCGCAGGCGGCTAGCGGCGTGACGAGTATGAATCA
CAGACCGGCATCGGCCAAGG

Product: peptidase M23B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MNAPLLFDWRRDEARRASRRRQQARQRAQERQRRMDAIIALAAVIGLLLALGVGLASTPQHVAHADTAVTGDAAYTVEDF
TDMSDLAWRNGNQCESRFDWPVDDPQVEQQFERPINPWAPGHRGVDLVAEQGTVILSPQAGTVSFAGKVAGKDVVSVRHR
GGVTSTFEPAVTELSVGDTISRRQPVGIVEGNSDHCEDRCLHWGLKRGTADYLDPQQYAGSRKIVLKPS

Sequences:

>Translated_229_residues
MNAPLLFDWRRDEARRASRRRQQARQRAQERQRRMDAIIALAAVIGLLLALGVGLASTPQHVAHADTAVTGDAAYTVEDF
TDMSDLAWRNGNQCESRFDWPVDDPQVEQQFERPINPWAPGHRGVDLVAEQGTVILSPQAGTVSFAGKVAGKDVVSVRHR
GGVTSTFEPAVTELSVGDTISRRQPVGIVEGNSDHCEDRCLHWGLKRGTADYLDPQQYAGSRKIVLKPS
>Mature_229_residues
MNAPLLFDWRRDEARRASRRRQQARQRAQERQRRMDAIIALAAVIGLLLALGVGLASTPQHVAHADTAVTGDAAYTVEDF
TDMSDLAWRNGNQCESRFDWPVDDPQVEQQFERPINPWAPGHRGVDLVAEQGTVILSPQAGTVSFAGKVAGKDVVSVRHR
GGVTSTFEPAVTELSVGDTISRRQPVGIVEGNSDHCEDRCLHWGLKRGTADYLDPQQYAGSRKIVLKPS

Specific function: Unknown

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR016047 [H]

Pfam domain/function: PF01551 Peptidase_M23 [H]

EC number: NA

Molecular weight: Translated: 25235; Mature: 25235

Theoretical pI: Translated: 7.13; Mature: 7.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAPLLFDWRRDEARRASRRRQQARQRAQERQRRMDAIIALAAVIGLLLALGVGLASTPQ
CCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
HVAHADTAVTGDAAYTVEDFTDMSDLAWRNGNQCESRFDWPVDDPQVEQQFERPINPWAP
HHHHCCCCCCCCCEEEHHHHCCHHHHHHCCCCCCHHCCCCCCCCHHHHHHHHCCCCCCCC
GHRGVDLVAEQGTVILSPQAGTVSFAGKVAGKDVVSVRHRGGVTSTFEPAVTELSVGDTI
CCCCCEEEECCCEEEECCCCCCEEEHHHHCCCHHHHHHHCCCCCCCCCCHHHHCCCCCCH
SRRQPVGIVEGNSDHCEDRCLHWGLKRGTADYLDPQQYAGSRKIVLKPS
HCCCCCEEEECCCCHHHHHHHHHHHHCCCCCCCCHHHHCCCCEEEEECC
>Mature Secondary Structure
MNAPLLFDWRRDEARRASRRRQQARQRAQERQRRMDAIIALAAVIGLLLALGVGLASTPQ
CCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
HVAHADTAVTGDAAYTVEDFTDMSDLAWRNGNQCESRFDWPVDDPQVEQQFERPINPWAP
HHHHCCCCCCCCCEEEHHHHCCHHHHHHCCCCCCHHCCCCCCCCHHHHHHHHCCCCCCCC
GHRGVDLVAEQGTVILSPQAGTVSFAGKVAGKDVVSVRHRGGVTSTFEPAVTELSVGDTI
CCCCCEEEECCCEEEECCCCCCEEEHHHHCCCHHHHHHHCCCCCCCCCCHHHHCCCCCCH
SRRQPVGIVEGNSDHCEDRCLHWGLKRGTADYLDPQQYAGSRKIVLKPS
HCCCCCEEEECCCCHHHHHHHHHHHHCCCCCCCCHHHHCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]