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The map label for this gene is IS1086 [H]

Identifier: 213691912

GI number: 213691912

Start: 1210680

End: 1211489

Strand: Direct

Name: IS1086 [H]

Synonym: Blon_1024

Alternate gene names: 213691912

Gene position: 1210680-1211489 (Clockwise)

Preceding gene: 213691909

Following gene: 213691913

Centisome position: 42.74

GC content: 64.32

Gene sequence:

>810_bases
ATGTCCTACTCCCCGTTGCTCGCATGGGTGATGGACGCGCTCAGGAAGGGGTGGACGCCGGAAAGGATCGAGGGGCGACT
GAAGGTCGAATGGCCCGACGACCCGCGCATGCGGATAAGCCACGAGTGCCTCTACCGGTGGATCTACGCGAAACCGCAGA
GGGCGCTGGACCTCAGGCAGTACCTGCCTCGCGGCAAGCGGCACCGCACGCGTTCGAAGGGCAGGAGGTCGAAGGGGCCG
CGCATTCCGATGCGCGTGCCGATCACGGACCGGCCGAAGAAGGTGGACTCGCGCCATGAGTTCGGCCACTTCGAATCCGA
CACCGTGGTCGGCGCGTCCCCGTCCAAGCGGTGCATCGACACGCAGGTCGAACGCAAGAGCCGCCGCCTGTTCGCCCGCC
TCATCCCCGACAAGGGCGCGCTGGCGACCGCGCGCGCCGAATACGACATCTACAAGGACATCCCCGCGCCCGCGCGCATC
GACCGGACATGGGACAACGGCACGGAATCCTCCTGCCACGTGCTCGTGGACGAGGCCCTCGGCATGCTCACCTACTATGC
GGACCCCTACTCCTCATACCAGCGCGGCACGAACGAGAACCGCAACGGGCGCATCCGCCGCTACCTGCCCAAGAGAACCA
GCTTCGACGACCTCACGGACGAGGATCTGCAGGCCATCGTCGATGAGATCAACGACACCCCCATGAAGGTCCTGGACTGG
GAAACGCCCAACGAGGTTTGGTACCGCGAGCTCGGCAAGGTAATGTCGAAGACAAGCCACCCAAAGACGGGTGTTGCACT
TATAAATTGA

Upstream 100 bases:

>100_bases
AAAGCTTATTCCCACCTGTCGGCAGAGGAACGGATCCGAATCGACGAATTGCGCAACAGGGACGGGCTCGGCGTGCGTCA
GATCGCGCAGGCCCCTGCGC

Downstream 100 bases:

>100_bases
ATCCGGGGGGCCGGAACGCCCCGGGAAGTCAACGGCGACGACAGGGAGACGACGATGGAGCAGCCGACCACGATCATCGC
CGGGGTGGACACGCACACCG

Product: Integrase, catalytic region

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 269; Mature: 268

Protein sequence:

>269_residues
MSYSPLLAWVMDALRKGWTPERIEGRLKVEWPDDPRMRISHECLYRWIYAKPQRALDLRQYLPRGKRHRTRSKGRRSKGP
RIPMRVPITDRPKKVDSRHEFGHFESDTVVGASPSKRCIDTQVERKSRRLFARLIPDKGALATARAEYDIYKDIPAPARI
DRTWDNGTESSCHVLVDEALGMLTYYADPYSSYQRGTNENRNGRIRRYLPKRTSFDDLTDEDLQAIVDEINDTPMKVLDW
ETPNEVWYRELGKVMSKTSHPKTGVALIN

Sequences:

>Translated_269_residues
MSYSPLLAWVMDALRKGWTPERIEGRLKVEWPDDPRMRISHECLYRWIYAKPQRALDLRQYLPRGKRHRTRSKGRRSKGP
RIPMRVPITDRPKKVDSRHEFGHFESDTVVGASPSKRCIDTQVERKSRRLFARLIPDKGALATARAEYDIYKDIPAPARI
DRTWDNGTESSCHVLVDEALGMLTYYADPYSSYQRGTNENRNGRIRRYLPKRTSFDDLTDEDLQAIVDEINDTPMKVLDW
ETPNEVWYRELGKVMSKTSHPKTGVALIN
>Mature_268_residues
SYSPLLAWVMDALRKGWTPERIEGRLKVEWPDDPRMRISHECLYRWIYAKPQRALDLRQYLPRGKRHRTRSKGRRSKGPR
IPMRVPITDRPKKVDSRHEFGHFESDTVVGASPSKRCIDTQVERKSRRLFARLIPDKGALATARAEYDIYKDIPAPARID
RTWDNGTESSCHVLVDEALGMLTYYADPYSSYQRGTNENRNGRIRRYLPKRTSFDDLTDEDLQAIVDEINDTPMKVLDWE
TPNEVWYRELGKVMSKTSHPKTGVALIN

Specific function: Required for the transposition of the insertion element (Potential) [H]

COG id: COG2826

COG function: function code L; Transposase and inactivated derivatives, IS30 family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Escherichia coli, GI1790736, Length=251, Percent_Identity=34.6613545816733, Blast_Score=143, Evalue=1e-35,
Organism=Escherichia coli, GI1787671, Length=251, Percent_Identity=34.6613545816733, Blast_Score=143, Evalue=1e-35,
Organism=Escherichia coli, GI1786450, Length=251, Percent_Identity=34.6613545816733, Blast_Score=142, Evalue=2e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337
- InterPro:   IPR001598 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 31404; Mature: 31273

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYSPLLAWVMDALRKGWTPERIEGRLKVEWPDDPRMRISHECLYRWIYAKPQRALDLRQ
CCCCHHHHHHHHHHHCCCCHHHHCCEEEEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHH
YLPRGKRHRTRSKGRRSKGPRIPMRVPITDRPKKVDSRHEFGHFESDTVVGASPSKRCID
HCCCCHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCHHHCCCCCCCEEECCCCCCHHHH
TQVERKSRRLFARLIPDKGALATARAEYDIYKDIPAPARIDRTWDNGTESSCHVLVDEAL
HHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHH
GMLTYYADPYSSYQRGTNENRNGRIRRYLPKRTSFDDLTDEDLQAIVDEINDTPMKVLDW
HHHHHHCCCHHHHHCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCEEECC
ETPNEVWYRELGKVMSKTSHPKTGVALIN
CCCHHHHHHHHHHHHHHCCCCCCCEEECC
>Mature Secondary Structure 
SYSPLLAWVMDALRKGWTPERIEGRLKVEWPDDPRMRISHECLYRWIYAKPQRALDLRQ
CCCHHHHHHHHHHHCCCCHHHHCCEEEEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHH
YLPRGKRHRTRSKGRRSKGPRIPMRVPITDRPKKVDSRHEFGHFESDTVVGASPSKRCID
HCCCCHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCHHHCCCCCCCEEECCCCCCHHHH
TQVERKSRRLFARLIPDKGALATARAEYDIYKDIPAPARIDRTWDNGTESSCHVLVDEAL
HHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHH
GMLTYYADPYSSYQRGTNENRNGRIRRYLPKRTSFDDLTDEDLQAIVDEINDTPMKVLDW
HHHHHHCCCHHHHHCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCEEECC
ETPNEVWYRELGKVMSKTSHPKTGVALIN
CCCHHHHHHHHHHHHHHCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1334071 [H]