| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691874
Identifier: 213691874
GI number: 213691874
Start: 1171510
End: 1172463
Strand: Direct
Name: 213691874
Synonym: Blon_0985
Alternate gene names: NA
Gene position: 1171510-1172463 (Clockwise)
Preceding gene: 213691871
Following gene: 213691875
Centisome position: 41.36
GC content: 58.91
Gene sequence:
>954_bases ATGTCGTTGCGCAAACCCTACAGGAGTGTGAACGAACAGCTGCGCATTCTGCGCTCCCGTGGCATGGCCGTCGATGCCGG TGCGGGTCATGTGCTCAGGCGCGAGGGCTATTATCCGATCGTCAATGGCTATAAGGATTTGTTCCTCGACCGAAAGGCAT GCCTGACCGCTGGTGATGACCGGTACGGAACGGGCGCGCGTTTCGATGATCTGTACGCCCTGTTCCTGTTCGACCGTGAG TTGCGTGAACTGTTGTTTTCCTCCATCACACGGGCGGAGGCCGCGCTCAAGGCAGTGTGCGCGCATGAGTTCACCGGGCT GCACCCCGACGAGGTCAACCCGTATCTCAATCCCGACTATTATGATTCCAGGTGCCGTCCGAGCGCCATGGCATTGATCG ACAAGGTCTTCAAGCGGATACTTGAGTTGGACGGCAACCCGCGCAACAGGGGCGACTATGGCGGCAAGGCGTATATCCGC CATTGCATGGAAGACCACAACGGCCAGGTCCCGTTGTGGGTGCTGGCCAACGATCTTTCCTTCGGCCAGACGGTATGGTT CTTCCAAGTCCAGTCCCCGGCCGTCCGATTGGCGGTCGCCGAAAGTTTCACCGGTTTGTATGCGGACACGCACGACAGGC CACGGCGCATCACCATCAAGCGGCTGGACAGCATCTTCAACAGACTGGTGTTCTACCGCAACCTGTGCGCGCATGACGAG CGCTGCTATTGTGCCCGGTACGATGGGCGCGCTAACGAGAACGTGTATCAGGCCATCGGGGATCTTGGTTATTTGCTTGA CAAGGACGATTACTTGGAATTGTTCGGTCGCTTCTCCGCATTGGTCGCACGGGTGACCTCCACCATGCCATCGCGGAGCC AAGCGATCCTGTCTGCCATGGGTGTGCGCGAACGGGAACTGGCCGACAGGGCGGAAATCATACTGCGCAGCTGA
Upstream 100 bases:
>100_bases ACAGCGAAATAAGCTGGACTTCGTTCGGTTCGCTGAGGCCATTCCGTGGACGCGGGGTGGCCTCAGTGCTTTCATCGCTG GATTGGGGGAGGTCGGACCC
Downstream 100 bases:
>100_bases CCGTTCCTGCTATTGGGACGGTGGCGTCGCAGGCGGCTTTGGACCATGAGCCAGCTGATCTGGGCTGTCTGCAATGGGCC TGTGGGATTCGGGATGGATT
Product: Abi family protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 317; Mature: 316
Protein sequence:
>317_residues MSLRKPYRSVNEQLRILRSRGMAVDAGAGHVLRREGYYPIVNGYKDLFLDRKACLTAGDDRYGTGARFDDLYALFLFDRE LRELLFSSITRAEAALKAVCAHEFTGLHPDEVNPYLNPDYYDSRCRPSAMALIDKVFKRILELDGNPRNRGDYGGKAYIR HCMEDHNGQVPLWVLANDLSFGQTVWFFQVQSPAVRLAVAESFTGLYADTHDRPRRITIKRLDSIFNRLVFYRNLCAHDE RCYCARYDGRANENVYQAIGDLGYLLDKDDYLELFGRFSALVARVTSTMPSRSQAILSAMGVRERELADRAEIILRS
Sequences:
>Translated_317_residues MSLRKPYRSVNEQLRILRSRGMAVDAGAGHVLRREGYYPIVNGYKDLFLDRKACLTAGDDRYGTGARFDDLYALFLFDRE LRELLFSSITRAEAALKAVCAHEFTGLHPDEVNPYLNPDYYDSRCRPSAMALIDKVFKRILELDGNPRNRGDYGGKAYIR HCMEDHNGQVPLWVLANDLSFGQTVWFFQVQSPAVRLAVAESFTGLYADTHDRPRRITIKRLDSIFNRLVFYRNLCAHDE RCYCARYDGRANENVYQAIGDLGYLLDKDDYLELFGRFSALVARVTSTMPSRSQAILSAMGVRERELADRAEIILRS >Mature_316_residues SLRKPYRSVNEQLRILRSRGMAVDAGAGHVLRREGYYPIVNGYKDLFLDRKACLTAGDDRYGTGARFDDLYALFLFDREL RELLFSSITRAEAALKAVCAHEFTGLHPDEVNPYLNPDYYDSRCRPSAMALIDKVFKRILELDGNPRNRGDYGGKAYIRH CMEDHNGQVPLWVLANDLSFGQTVWFFQVQSPAVRLAVAESFTGLYADTHDRPRRITIKRLDSIFNRLVFYRNLCAHDER CYCARYDGRANENVYQAIGDLGYLLDKDDYLELFGRFSALVARVTSTMPSRSQAILSAMGVRERELADRAEIILRS
Specific function: Unknown
COG id: COG4823
COG function: function code V; Abortive infection bacteriophage resistance protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36325; Mature: 36194
Theoretical pI: Translated: 8.25; Mature: 8.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLRKPYRSVNEQLRILRSRGMAVDAGAGHVLRREGYYPIVNGYKDLFLDRKACLTAGDD CCCCCHHHHHHHHHHHHHHCCCEEECCCCCHHHCCCCCCHHCCHHHHHHCHHHHHCCCCC RYGTGARFDDLYALFLFDRELRELLFSSITRAEAALKAVCAHEFTGLHPDEVNPYLNPDY CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC YDSRCRPSAMALIDKVFKRILELDGNPRNRGDYGGKAYIRHCMEDHNGQVPLWVLANDLS CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCC FGQTVWFFQVQSPAVRLAVAESFTGLYADTHDRPRRITIKRLDSIFNRLVFYRNLCAHDE CCCEEEEEEECCCCEEEHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC RCYCARYDGRANENVYQAIGDLGYLLDKDDYLELFGRFSALVARVTSTMPSRSQAILSAM CEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH GVRERELADRAEIILRS CCHHHHHHHHHHHHCCC >Mature Secondary Structure SLRKPYRSVNEQLRILRSRGMAVDAGAGHVLRREGYYPIVNGYKDLFLDRKACLTAGDD CCCCHHHHHHHHHHHHHHCCCEEECCCCCHHHCCCCCCHHCCHHHHHHCHHHHHCCCCC RYGTGARFDDLYALFLFDRELRELLFSSITRAEAALKAVCAHEFTGLHPDEVNPYLNPDY CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC YDSRCRPSAMALIDKVFKRILELDGNPRNRGDYGGKAYIRHCMEDHNGQVPLWVLANDLS CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCC FGQTVWFFQVQSPAVRLAVAESFTGLYADTHDRPRRITIKRLDSIFNRLVFYRNLCAHDE CCCEEEEEEECCCCEEEHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC RCYCARYDGRANENVYQAIGDLGYLLDKDDYLELFGRFSALVARVTSTMPSRSQAILSAM CEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH GVRERELADRAEIILRS CCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA