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The map label for this gene is 213691872

Identifier: 213691872

GI number: 213691872

Start: 1168252

End: 1169595

Strand: Reverse

Name: 213691872

Synonym: Blon_0983

Alternate gene names: NA

Gene position: 1169595-1168252 (Counterclockwise)

Preceding gene: 213691873

Following gene: 213691870

Centisome position: 41.29

GC content: 62.72

Gene sequence:

>1344_bases
ATGTCCAATGGAGACAGGAAAAGACGGAAATGGGGATGCGTCGTCGCCTGCAAGGACGCGGACGGAAGGATCGTCTCCTG
GCAGGCCCGATACCAGAGTCCCGTCAATCCCAGGCAAAGAATCTACCGCCGATTCGGATTGGAATTCCAGACCGAGGCGT
ACCGCTGGCTCGACGAGGAGCACGCGCTCGTCATCGACCATAAAAAGGGAATCCGCAGGTGGACGCACCCGTCTGCAAGG
ACGATGCACGGCAGGGTCCTGTTCTCCTCATACGCGACGCGTTTCGTCGCCAACCTGCGGAAGAAGGACGGGTCGGAGCT
GAGCGGCAGAAGCAAGCGGATCCAGAAGGCGGCGTTGGACAAACTGCTCCCCTGGTTCGGCGAGACGCCCATGTGCGACA
TCACCGAGGAATTCGTCAACGAATGGTACGCGAAGGCATGCGACGAGGTGCGTCCCTCCGCGCTCGAGCACGCGGTCTGG
CTGCTCAAGCGCCTGATGAGGGCCGCGACCGAGCGGCAGCCGGACGGAGGTCCGCCGCTATTGTTCTCGAATCCATGCAA
TCTCGTCACGAGGAAGAGACCGTCCAAAAGACGCGAGCAGGCGCCGATGACCAGGCAGGAGATCGACACGCTGGTCGAGG
GCTTCCCGGAATACTACCGCCTGTCGATCCATCTCGCGCTGCTGGTGGGCGGGCTGCGCATCGGAGAGGTCTGCGGACTG
CAACTCAGGGACATCGACCTCGACCACAGACTGCTGTACGTGCGGCATTCCGTGACGCAAGGTCCGGACGATCTGGGCGA
ATACCGGCTCGACGAGACGAAGACCCCGGAAAGCCACCGAGTCGTACCCATCCCCGCACCGGTCTGCCGTCTCATCAGGG
AACATATCGACAGGTTCTGTCCCGACAGGGATCCCGACACGATGCTCTTCCACGCGATCAGGCACCCGGAACGGGTCCTG
AACCCGACGACGATCCAACGGCAGTTCCGCACCGCGAGGAAAAGAATCAACCGCGAGGACGTGACGTTCCACTCCCTGCG
CGCGACACACGCGACGATGTTCATGATCCAGGGCGGCACACTGCGCGAGACCATGGACGAGCTCGGCCATGTGGACGTCG
ACGTGGCCGTCCGATGCTACCAACGCGTGGTGCCGAGACACAGGCGCGACGTCGCCGAACGACTGGCGCTCGAATATCTC
CCCGCCGGGGATCCGGCCGGCATCAAGGCGCAGATAGCCCAGAAGGAAGAGGAAATCGACCAGCTGCGACAGACCGTCGC
CGGACTCCGAAGAAGACTGGAAGAGCTCGAAGACGACGGAGACGGGCGGAGCCAGTCCGGATAA

Upstream 100 bases:

>100_bases
CCCACGGTCGAAGGATAGCACCTTATTCAAAATCACCGGCGTAGGCAATTACTCTTTCTTCTAATGGTTTTTCAAGAAGT
AGAGAAAGACAAAACAACCG

Downstream 100 bases:

>100_bases
GCATACCCAAAACCGAAAAACCGAAAAACCGAAATAATGAAAAACCAAAACCGGTGGAGACCGGCATCAAACGGAACAGG
CCCACGCATCTAAGCGTTGC

Product: phage integrase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 447; Mature: 446

Protein sequence:

>447_residues
MSNGDRKRRKWGCVVACKDADGRIVSWQARYQSPVNPRQRIYRRFGLEFQTEAYRWLDEEHALVIDHKKGIRRWTHPSAR
TMHGRVLFSSYATRFVANLRKKDGSELSGRSKRIQKAALDKLLPWFGETPMCDITEEFVNEWYAKACDEVRPSALEHAVW
LLKRLMRAATERQPDGGPPLLFSNPCNLVTRKRPSKRREQAPMTRQEIDTLVEGFPEYYRLSIHLALLVGGLRIGEVCGL
QLRDIDLDHRLLYVRHSVTQGPDDLGEYRLDETKTPESHRVVPIPAPVCRLIREHIDRFCPDRDPDTMLFHAIRHPERVL
NPTTIQRQFRTARKRINREDVTFHSLRATHATMFMIQGGTLRETMDELGHVDVDVAVRCYQRVVPRHRRDVAERLALEYL
PAGDPAGIKAQIAQKEEEIDQLRQTVAGLRRRLEELEDDGDGRSQSG

Sequences:

>Translated_447_residues
MSNGDRKRRKWGCVVACKDADGRIVSWQARYQSPVNPRQRIYRRFGLEFQTEAYRWLDEEHALVIDHKKGIRRWTHPSAR
TMHGRVLFSSYATRFVANLRKKDGSELSGRSKRIQKAALDKLLPWFGETPMCDITEEFVNEWYAKACDEVRPSALEHAVW
LLKRLMRAATERQPDGGPPLLFSNPCNLVTRKRPSKRREQAPMTRQEIDTLVEGFPEYYRLSIHLALLVGGLRIGEVCGL
QLRDIDLDHRLLYVRHSVTQGPDDLGEYRLDETKTPESHRVVPIPAPVCRLIREHIDRFCPDRDPDTMLFHAIRHPERVL
NPTTIQRQFRTARKRINREDVTFHSLRATHATMFMIQGGTLRETMDELGHVDVDVAVRCYQRVVPRHRRDVAERLALEYL
PAGDPAGIKAQIAQKEEEIDQLRQTVAGLRRRLEELEDDGDGRSQSG
>Mature_446_residues
SNGDRKRRKWGCVVACKDADGRIVSWQARYQSPVNPRQRIYRRFGLEFQTEAYRWLDEEHALVIDHKKGIRRWTHPSART
MHGRVLFSSYATRFVANLRKKDGSELSGRSKRIQKAALDKLLPWFGETPMCDITEEFVNEWYAKACDEVRPSALEHAVWL
LKRLMRAATERQPDGGPPLLFSNPCNLVTRKRPSKRREQAPMTRQEIDTLVEGFPEYYRLSIHLALLVGGLRIGEVCGLQ
LRDIDLDHRLLYVRHSVTQGPDDLGEYRLDETKTPESHRVVPIPAPVCRLIREHIDRFCPDRDPDTMLFHAIRHPERVLN
PTTIQRQFRTARKRINREDVTFHSLRATHATMFMIQGGTLRETMDELGHVDVDVAVRCYQRVVPRHRRDVAERLALEYLP
AGDPAGIKAQIAQKEEEIDQLRQTVAGLRRRLEELEDDGDGRSQSG

Specific function: Integrase is necessary for integration of the phage into the host genome by site-specific recombination. In conjunction with excisionase, integrase is also necessary for excision of the prophage from the host genome [H]

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR023109 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 51831; Mature: 51700

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNGDRKRRKWGCVVACKDADGRIVSWQARYQSPVNPRQRIYRRFGLEFQTEAYRWLDEE
CCCCCHHHHHCCEEEEEECCCCCEEEEHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHCCC
HALVIDHKKGIRRWTHPSARTMHGRVLFSSYATRFVANLRKKDGSELSGRSKRIQKAALD
CEEEEECHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
KLLPWFGETPMCDITEEFVNEWYAKACDEVRPSALEHAVWLLKRLMRAATERQPDGGPPL
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCE
LFSNPCNLVTRKRPSKRREQAPMTRQEIDTLVEGFPEYYRLSIHLALLVGGLRIGEVCGL
EECCCCCHHHCCCCHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHCC
QLRDIDLDHRLLYVRHSVTQGPDDLGEYRLDETKTPESHRVVPIPAPVCRLIREHIDRFC
EEECCCCCHHEEEEEHHCCCCCHHHHHCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHC
PDRDPDTMLFHAIRHPERVLNPTTIQRQFRTARKRINREDVTFHSLRATHATMFMIQGGT
CCCCCHHHHHHHHHCHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHEEEEECCCC
LRETMDELGHVDVDVAVRCYQRVVPRHRRDVAERLALEYLPAGDPAGIKAQIAQKEEEID
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
QLRQTVAGLRRRLEELEDDGDGRSQSG
HHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
SNGDRKRRKWGCVVACKDADGRIVSWQARYQSPVNPRQRIYRRFGLEFQTEAYRWLDEE
CCCCHHHHHCCEEEEEECCCCCEEEEHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHCCC
HALVIDHKKGIRRWTHPSARTMHGRVLFSSYATRFVANLRKKDGSELSGRSKRIQKAALD
CEEEEECHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
KLLPWFGETPMCDITEEFVNEWYAKACDEVRPSALEHAVWLLKRLMRAATERQPDGGPPL
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCE
LFSNPCNLVTRKRPSKRREQAPMTRQEIDTLVEGFPEYYRLSIHLALLVGGLRIGEVCGL
EECCCCCHHHCCCCHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHCC
QLRDIDLDHRLLYVRHSVTQGPDDLGEYRLDETKTPESHRVVPIPAPVCRLIREHIDRFC
EEECCCCCHHEEEEEHHCCCCCHHHHHCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHC
PDRDPDTMLFHAIRHPERVLNPTTIQRQFRTARKRINREDVTFHSLRATHATMFMIQGGT
CCCCCHHHHHHHHHCHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHEEEEECCCC
LRETMDELGHVDVDVAVRCYQRVVPRHRRDVAERLALEYLPAGDPAGIKAQIAQKEEEID
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
QLRQTVAGLRRRLEELEDDGDGRSQSG
HHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]