| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691856
Identifier: 213691856
GI number: 213691856
Start: 1145441
End: 1146229
Strand: Reverse
Name: 213691856
Synonym: Blon_0965
Alternate gene names: NA
Gene position: 1146229-1145441 (Counterclockwise)
Preceding gene: 213691857
Following gene: 213691849
Centisome position: 40.46
GC content: 57.79
Gene sequence:
>789_bases ATGAGACTACTGGTTGCCGTATCCAATGAACCGTTGGCCCGCGCCATTCGTGGTGCCCTACTTGCCGGTCGTCATGAAGT GTCTTTGGCAAGCACCGGTAGTATCGCGCTCGCCGCTGTCGCCAAGGAGTCATTTGACGCAGTGATTCTTGATGAATCCC TGCTCGGCAGTTCCACCAAGCAGCTCATCGAATCCCTACGCAATGCCCGTGCCTCCGTCAAGATTCTGCTGCTGACTTCG ACGCCACTCAGCAAAACCATTGGCGAAGGCAGCCGCTGGCGAGCGCTGCCTGACGAGTACGCCCCTATCGAAGAGACGCC CTACAGCTCCTTCAGCGCGGATTCACGCGCAAACAACTCAGATGCCGAAGCCGAACAACGCTCGGACAATGCCGCCGCTA GCGCACAAGCTAACGTACGACGCCCGGATGCCGCGCTGAGCAAACCATTCTCCGATGGCGAACTGCTCTCATACGTCGGC TCGCTTGCCACCGACTCCCCCGCCATGATCATTCGTGGCAATCTCACGTTGGACACCACGAATCACAAGGCCTACTACGC ATCCACGCGCAGCGCAATCTCACTGTCCCGTCTGGAATACAGTTTGCTTGAAGCACTGGTCAAGGCTGATGGTCAGTTCG TCAACACCAGCGAATTGGTCAAGCTCGTCGGTGGCCCATTCTTCGAGCAACAAGGGCTCCTCAAGAACGCCCTCTACACA CTGGATAAGAAGCTCACCCGCGCCGGCCTCATCATGACCCAACGCGGCTCCAACTACCGCATTCGATAG
Upstream 100 bases:
>100_bases CCCCAGTGGGGTGTTTGTAGGCGAGGAACGAACGACAGTGAGCCAAACAATAGAGAAGAGACCCTAAACCCGACCTACAC TAAGCATCAAGGAGGTGGCG
Downstream 100 bases:
>100_bases TTGGGCTCAATCAGTACAGCCGCATGCCTCGGGGAACGGGGGTGAAGCCGGACTGGTGGAGGATGCGGGCGAAGGGGTGA CGCGCGTTGAGGGGTTCGCC
Product: two component transcriptional regulator, winged helix family
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 262; Mature: 262
Protein sequence:
>262_residues MRLLVAVSNEPLARAIRGALLAGRHEVSLASTGSIALAAVAKESFDAVILDESLLGSSTKQLIESLRNARASVKILLLTS TPLSKTIGEGSRWRALPDEYAPIEETPYSSFSADSRANNSDAEAEQRSDNAAASAQANVRRPDAALSKPFSDGELLSYVG SLATDSPAMIIRGNLTLDTTNHKAYYASTRSAISLSRLEYSLLEALVKADGQFVNTSELVKLVGGPFFEQQGLLKNALYT LDKKLTRAGLIMTQRGSNYRIR
Sequences:
>Translated_262_residues MRLLVAVSNEPLARAIRGALLAGRHEVSLASTGSIALAAVAKESFDAVILDESLLGSSTKQLIESLRNARASVKILLLTS TPLSKTIGEGSRWRALPDEYAPIEETPYSSFSADSRANNSDAEAEQRSDNAAASAQANVRRPDAALSKPFSDGELLSYVG SLATDSPAMIIRGNLTLDTTNHKAYYASTRSAISLSRLEYSLLEALVKADGQFVNTSELVKLVGGPFFEQQGLLKNALYT LDKKLTRAGLIMTQRGSNYRIR >Mature_262_residues MRLLVAVSNEPLARAIRGALLAGRHEVSLASTGSIALAAVAKESFDAVILDESLLGSSTKQLIESLRNARASVKILLLTS TPLSKTIGEGSRWRALPDEYAPIEETPYSSFSADSRANNSDAEAEQRSDNAAASAQANVRRPDAALSKPFSDGELLSYVG SLATDSPAMIIRGNLTLDTTNHKAYYASTRSAISLSRLEYSLLEALVKADGQFVNTSELVKLVGGPFFEQQGLLKNALYT LDKKLTRAGLIMTQRGSNYRIR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28179; Mature: 28179
Theoretical pI: Translated: 9.21; Mature: 9.21
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLLVAVSNEPLARAIRGALLAGRHEVSLASTGSIALAAVAKESFDAVILDESLLGSSTK CEEEEEECCCHHHHHHHHHHHCCCCEEEEECCCCEEEEEHHHHCCCEEEECHHHHCHHHH QLIESLRNARASVKILLLTSTPLSKTIGEGSRWRALPDEYAPIEETPYSSFSADSRANNS HHHHHHHCCCCEEEEEEEECCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DAEAEQRSDNAAASAQANVRRPDAALSKPFSDGELLSYVGSLATDSPAMIIRGNLTLDTT CHHHHHHCCCHHHHCCCCCCCCCHHHCCCCCCCHHHHHHHHHCCCCCCEEEECCEEEECC NHKAYYASTRSAISLSRLEYSLLEALVKADGQFVNTSELVKLVGGPFFEQQGLLKNALYT CCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCEECHHHHHHHHCCCCHHHHHHHHHHHHH LDKKLTRAGLIMTQRGSNYRIR HHHHHHHHCEEEEECCCCCCCC >Mature Secondary Structure MRLLVAVSNEPLARAIRGALLAGRHEVSLASTGSIALAAVAKESFDAVILDESLLGSSTK CEEEEEECCCHHHHHHHHHHHCCCCEEEEECCCCEEEEEHHHHCCCEEEECHHHHCHHHH QLIESLRNARASVKILLLTSTPLSKTIGEGSRWRALPDEYAPIEETPYSSFSADSRANNS HHHHHHHCCCCEEEEEEEECCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DAEAEQRSDNAAASAQANVRRPDAALSKPFSDGELLSYVGSLATDSPAMIIRGNLTLDTT CHHHHHHCCCHHHHCCCCCCCCCHHHCCCCCCCHHHHHHHHHCCCCCCEEEECCEEEECC NHKAYYASTRSAISLSRLEYSLLEALVKADGQFVNTSELVKLVGGPFFEQQGLLKNALYT CCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCEECHHHHHHHHCCCCHHHHHHHHHHHHH LDKKLTRAGLIMTQRGSNYRIR HHHHHHHHCEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA