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The map label for this gene is idsA [H]

Identifier: 213691849

GI number: 213691849

Start: 1132328

End: 1133410

Strand: Reverse

Name: idsA [H]

Synonym: Blon_0958

Alternate gene names: 213691849

Gene position: 1133410-1132328 (Counterclockwise)

Preceding gene: 213691856

Following gene: 213691848

Centisome position: 40.01

GC content: 60.2

Gene sequence:

>1083_bases
ATGTGCACAACTGCTAACAACCGCGAAATCATCGAGCCACGCATCATTCAGTTGGTGCGGGAACTGACTGCCGCCCCCGC
CACCGACGAGGTTACCGACGCCCTGAAACCGGTGATGGAACAGGTTGTGGACCAAGCCGCCTCCTCCAGCGAAGGCGGCA
AACGACTGCGTGCGCTGCTCGCATTGGACGCCTTCGATATTCTTGCCGGCGACGTGACGCCTGATCGGCGTGACGCCATG
ATCGACCTGGCCTGCGCCATTGAAGTGTTTCAGACGGCCGCACTGGTGCATGACGACATCATTGACGAATCCGATCTGCG
CCGGGGCAGGCCTTCCGCACATCGTGCCTTGGAACAGGCCGTACACAGCGGTGCCATAGGCCGTGGCTTGGGCCTGATGC
TCGGCGACATTCTGGCCACTGCCTGCATTGAAATCACACGCCGGTCCGCCAGCCGTCTTCCCAACACCGATGCCCTGAAC
GAGGCGTTTCTTACCATGCAGCGTGAGGTGGAAATCGGCCAGGTACTGGACTTGGCCGTCGAGATGACCCCACTGTCTAA
TCCCGAAGCTCTGGCGAACGCCTCATTGAACGTATTCCGCTGGAAGACAGCCAGTTACACCACCATCGCTCCACTGCTGC
TTGCACTGCTGGCCGCAGGAGAGAGCCCGGATCAGGCCAGGCATTGCGCGTTGGCCGTCGGCCGGCCGCTCGGACTGGCG
TTCCAACTGGCGGATGACCTGTTGGATGTCGTCGGATCAAGCCGCAATACCGGAAAACCAGTTGGCGGAGACATCCGAGA
AGGCAAACGCACAGTGCTGTTGGCTGATGCTCTGTCTGCGGCAGATACGGCGGATAAGGCCGATCTGATTGCCATCTTCG
AAGAAGATTGTCGCAATGACAACCAGGTGGCCCGCACCATTGAACTGTTCACGTCGACCGGTGCTCTTGATCGATCCCGC
GAGCGCATCGCTGCCCTATGGGGTGAGTCCCGTAAGGCGATTGCCGGTCTTGAGCTGAATTCCGAAGCGCAACGCCGTCT
GACCGAGGCTTGTGCGCGATTCGTCCCCGAATCCTTGCGATAG

Upstream 100 bases:

>100_bases
CGTATGACGCAGGAAAAAACGACCATTGTGGTTCTAGCTTCAAAACCCTTGATTCCCAACGTTCTTGTGTTCTTCAAACC
CTGTGGATAAGTTATTAGGC

Downstream 100 bases:

>100_bases
TCCACAATGCGAGCCGCCGGACCATGAGACCATAAACACCGGTGAAAACCCGTGAAAGCTATGCGCTGATGCTCCGGCCG
CGTAACCGGGGCCATGTACA

Product: Polyprenyl synthetase

Products: NA

Alternate protein names: (2E,6E)-farnesyl diphosphate synthase; Dimethylallyltranstransferase; Farnesyl diphosphate synthase; Farnesyl pyrophosphate synthase; FPP synthase; Geranyltranstransferase [H]

Number of amino acids: Translated: 360; Mature: 360

Protein sequence:

>360_residues
MCTTANNREIIEPRIIQLVRELTAAPATDEVTDALKPVMEQVVDQAASSSEGGKRLRALLALDAFDILAGDVTPDRRDAM
IDLACAIEVFQTAALVHDDIIDESDLRRGRPSAHRALEQAVHSGAIGRGLGLMLGDILATACIEITRRSASRLPNTDALN
EAFLTMQREVEIGQVLDLAVEMTPLSNPEALANASLNVFRWKTASYTTIAPLLLALLAAGESPDQARHCALAVGRPLGLA
FQLADDLLDVVGSSRNTGKPVGGDIREGKRTVLLADALSAADTADKADLIAIFEEDCRNDNQVARTIELFTSTGALDRSR
ERIAALWGESRKAIAGLELNSEAQRRLTEACARFVPESLR

Sequences:

>Translated_360_residues
MCTTANNREIIEPRIIQLVRELTAAPATDEVTDALKPVMEQVVDQAASSSEGGKRLRALLALDAFDILAGDVTPDRRDAM
IDLACAIEVFQTAALVHDDIIDESDLRRGRPSAHRALEQAVHSGAIGRGLGLMLGDILATACIEITRRSASRLPNTDALN
EAFLTMQREVEIGQVLDLAVEMTPLSNPEALANASLNVFRWKTASYTTIAPLLLALLAAGESPDQARHCALAVGRPLGLA
FQLADDLLDVVGSSRNTGKPVGGDIREGKRTVLLADALSAADTADKADLIAIFEEDCRNDNQVARTIELFTSTGALDRSR
ERIAALWGESRKAIAGLELNSEAQRRLTEACARFVPESLR
>Mature_360_residues
MCTTANNREIIEPRIIQLVRELTAAPATDEVTDALKPVMEQVVDQAASSSEGGKRLRALLALDAFDILAGDVTPDRRDAM
IDLACAIEVFQTAALVHDDIIDESDLRRGRPSAHRALEQAVHSGAIGRGLGLMLGDILATACIEITRRSASRLPNTDALN
EAFLTMQREVEIGQVLDLAVEMTPLSNPEALANASLNVFRWKTASYTTIAPLLLALLAAGESPDQARHCALAVGRPLGLA
FQLADDLLDVVGSSRNTGKPVGGDIREGKRTVLLADALSAADTADKADLIAIFEEDCRNDNQVARTIELFTSTGALDRSR
ERIAALWGESRKAIAGLELNSEAQRRLTEACARFVPESLR

Specific function: Supplies Octaprenyl Diphosphate, The Precursor For The Side Chain Of The Isoprenoid Quinones Ubiquinone And Menaquinone. [C]

COG id: COG0142

COG function: function code H; Geranylgeranyl pyrophosphate synthase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FPP/GGPP synthase family [H]

Homologues:

Organism=Homo sapiens, GI209571584, Length=278, Percent_Identity=29.4964028776978, Blast_Score=79, Evalue=5e-15,
Organism=Homo sapiens, GI209571582, Length=278, Percent_Identity=29.8561151079137, Blast_Score=79, Evalue=7e-15,
Organism=Homo sapiens, GI4503685, Length=278, Percent_Identity=29.8561151079137, Blast_Score=79, Evalue=7e-15,
Organism=Escherichia coli, GI1789578, Length=301, Percent_Identity=30.2325581395349, Blast_Score=105, Evalue=4e-24,
Organism=Caenorhabditis elegans, GI17508563, Length=312, Percent_Identity=29.1666666666667, Blast_Score=86, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI17505681, Length=248, Percent_Identity=27.8225806451613, Blast_Score=76, Evalue=2e-14,
Organism=Saccharomyces cerevisiae, GI6322294, Length=241, Percent_Identity=29.4605809128631, Blast_Score=84, Evalue=3e-17,
Organism=Drosophila melanogaster, GI17137582, Length=307, Percent_Identity=27.6872964169381, Blast_Score=86, Evalue=3e-17,
Organism=Drosophila melanogaster, GI24651612, Length=241, Percent_Identity=31.1203319502075, Blast_Score=79, Evalue=6e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000092
- InterPro:   IPR017446
- InterPro:   IPR008949 [H]

Pfam domain/function: PF00348 polyprenyl_synt [H]

EC number: =2.5.1.1; =2.5.1.10 [H]

Molecular weight: Translated: 38725; Mature: 38725

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: PS00723 POLYPRENYL_SYNTHET_1 ; PS00444 POLYPRENYL_SYNTHET_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCTTANNREIIEPRIIQLVRELTAAPATDEVTDALKPVMEQVVDQAASSSEGGKRLRALL
CCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
ALDAFDILAGDVTPDRRDAMIDLACAIEVFQTAALVHDDIIDESDLRRGRPSAHRALEQA
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHH
VHSGAIGRGLGLMLGDILATACIEITRRSASRLPNTDALNEAFLTMQREVEIGQVLDLAV
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
EMTPLSNPEALANASLNVFRWKTASYTTIAPLLLALLAAGESPDQARHCALAVGRPLGLA
HCCCCCCCHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHH
FQLADDLLDVVGSSRNTGKPVGGDIREGKRTVLLADALSAADTADKADLIAIFEEDCRND
HHHHHHHHHHHCCCCCCCCCCCCCHHCCCEEEEEEHHHHHCCCCCCHHHHHHHHHHCCCC
NQVARTIELFTSTGALDRSRERIAALWGESRKAIAGLELNSEAQRRLTEACARFVPESLR
HHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MCTTANNREIIEPRIIQLVRELTAAPATDEVTDALKPVMEQVVDQAASSSEGGKRLRALL
CCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
ALDAFDILAGDVTPDRRDAMIDLACAIEVFQTAALVHDDIIDESDLRRGRPSAHRALEQA
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHH
VHSGAIGRGLGLMLGDILATACIEITRRSASRLPNTDALNEAFLTMQREVEIGQVLDLAV
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
EMTPLSNPEALANASLNVFRWKTASYTTIAPLLLALLAAGESPDQARHCALAVGRPLGLA
HCCCCCCCHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHH
FQLADDLLDVVGSSRNTGKPVGGDIREGKRTVLLADALSAADTADKADLIAIFEEDCRND
HHHHHHHHHHHCCCCCCCCCCCCCHHCCCEEEEEEHHHHHCCCCCCHHHHHHHHHHCCCC
NQVARTIELFTSTGALDRSRERIAALWGESRKAIAGLELNSEAQRRLTEACARFVPESLR
HHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]