| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691853
Identifier: 213691853
GI number: 213691853
Start: 1138419
End: 1139645
Strand: Direct
Name: 213691853
Synonym: Blon_0962
Alternate gene names: NA
Gene position: 1138419-1139645 (Clockwise)
Preceding gene: 213691852
Following gene: 213691854
Centisome position: 40.19
GC content: 60.72
Gene sequence:
>1227_bases ATGGCCATTCTGTTGCTTGCCGTCATCTATGTGGCGTTTATCAGTCTGGGGTTGCCGGATTCGCTACTCGGGTCCGCGTG GCCCACCATGAGCCAGAATCTGAACGTGCCGGTGGCGTGGGCTGGCGGCATCTCCGCAGTGATTTCCATGTTCACGATTG TTTCGGCGCTGCTTTCGGACCGAATGACATTGAAATTCGGGGCCGGTAAGGTCACCGCCGTTTCGGTGGCGTTGACTGCG GCGGCCTTGGCCGGTTTCTCCATTGCCCCGAATTACTGGGTGCTGTTGGCCATCGCCATACCGTACGGCCTTGGCGCGGG CGGCGTGGATGCGGCGCTCAATAACTACGTAGCCATTCACTACGAAAGCCGGCATATGAGCTGGCTGCACTGCATGTGGG GCGTCGGCGCATCGGTCGGCCCCTATATCATGGGCTATGCGCTCTCTCAAGGCCAAGGCTGGCCGTGGGGCTATCGGTAC ATCGCGATTCTGCAGGTGATGCTGACCGTCATTCTGGTGCTGAGCCTGCCGCTGTGGAAGAAACGTGGCACGACTGGGGG TGGCGAATCGACCGATGGCGCCGCATCATCTGACGGCAATGCCGAGGGATGTGGTAATGCTGAAGGGGCGTCTGTTGCTG AACGCAAACCGCTCGGCGTGGCCGGCGTGCTCGCCATTCGCGGTGCCAAGGAAATCCTCGTGATGTTCTTCTGCTACTGC GCCATCGAATCCACGGCGGGCCTGTGGGCCTCCAGCTACATGGTGATGCACAGCGGCATCGACAAGATCACCGCCGCCAG CTGGGCCGGTCTATTCTACGTAGGCATCACCGTGGGGCGTGCGCTTTCCGGCTTTCTGAGCATGCGATTCAAGGACCCGG TCATGATTCGCCTCGGCCAAGTGCTGGTGCTCGCCGGCATCCTCACCATGTTCGTGCCATTGCCTCACCACCTTGGCGTG GTCGTTGGGCTGGTGGTCATCGGCTTCGGGTGCGCGCCGATTTATCCGTGCGTCATCCACTCGACGCCGGCCTACTTCGG CGAAGACAAATCGCAGGCCGTCGTCGGCGTGCAGATGGCCTGTGCCTATGTGGGCTCACTGCTCATGCCGCCACTGTTCG GCATCATCGCGCAATATGTGACAATCAGTCTCTACCCGTGGTATTTGCTGGTGCTCTTGGTGCTGATGGTGGCCATGCAC GAGCGTCTTCGTAAGTTGCGCGGCTGA
Upstream 100 bases:
>100_bases CACGTTGTCATATGTTTTATTCGTGTTGCCCATGAGTTATTCGATAGACTGATGACATCGTTATCACAACCGATGCCGTA CTGTGAATGGGAGATGGAAC
Downstream 100 bases:
>100_bases TCATGCGCGCATTTGGGCCCGCCGCCTACTATGCTTGGAGCCCATGGTGATAAGTGAAGAAGAACATAAACAGATGCCCG AGCCCGTACGGGAACGATTG
Product: major facilitator superfamily MFS_1
Products: NA
Alternate protein names: Facilitator Superfamily Protein; Transporter Fucose Permease; MFS Family Facilitator Transporter; Transporter Facilitator Family; Fucose Permease; Multidrug Resistance Protein; Facilitator Superfamily Transporter; Transporter Facilitator Family Protein
Number of amino acids: Translated: 408; Mature: 407
Protein sequence:
>408_residues MAILLLAVIYVAFISLGLPDSLLGSAWPTMSQNLNVPVAWAGGISAVISMFTIVSALLSDRMTLKFGAGKVTAVSVALTA AALAGFSIAPNYWVLLAIAIPYGLGAGGVDAALNNYVAIHYESRHMSWLHCMWGVGASVGPYIMGYALSQGQGWPWGYRY IAILQVMLTVILVLSLPLWKKRGTTGGGESTDGAASSDGNAEGCGNAEGASVAERKPLGVAGVLAIRGAKEILVMFFCYC AIESTAGLWASSYMVMHSGIDKITAASWAGLFYVGITVGRALSGFLSMRFKDPVMIRLGQVLVLAGILTMFVPLPHHLGV VVGLVVIGFGCAPIYPCVIHSTPAYFGEDKSQAVVGVQMACAYVGSLLMPPLFGIIAQYVTISLYPWYLLVLLVLMVAMH ERLRKLRG
Sequences:
>Translated_408_residues MAILLLAVIYVAFISLGLPDSLLGSAWPTMSQNLNVPVAWAGGISAVISMFTIVSALLSDRMTLKFGAGKVTAVSVALTA AALAGFSIAPNYWVLLAIAIPYGLGAGGVDAALNNYVAIHYESRHMSWLHCMWGVGASVGPYIMGYALSQGQGWPWGYRY IAILQVMLTVILVLSLPLWKKRGTTGGGESTDGAASSDGNAEGCGNAEGASVAERKPLGVAGVLAIRGAKEILVMFFCYC AIESTAGLWASSYMVMHSGIDKITAASWAGLFYVGITVGRALSGFLSMRFKDPVMIRLGQVLVLAGILTMFVPLPHHLGV VVGLVVIGFGCAPIYPCVIHSTPAYFGEDKSQAVVGVQMACAYVGSLLMPPLFGIIAQYVTISLYPWYLLVLLVLMVAMH ERLRKLRG >Mature_407_residues AILLLAVIYVAFISLGLPDSLLGSAWPTMSQNLNVPVAWAGGISAVISMFTIVSALLSDRMTLKFGAGKVTAVSVALTAA ALAGFSIAPNYWVLLAIAIPYGLGAGGVDAALNNYVAIHYESRHMSWLHCMWGVGASVGPYIMGYALSQGQGWPWGYRYI AILQVMLTVILVLSLPLWKKRGTTGGGESTDGAASSDGNAEGCGNAEGASVAERKPLGVAGVLAIRGAKEILVMFFCYCA IESTAGLWASSYMVMHSGIDKITAASWAGLFYVGITVGRALSGFLSMRFKDPVMIRLGQVLVLAGILTMFVPLPHHLGVV VGLVVIGFGCAPIYPCVIHSTPAYFGEDKSQAVVGVQMACAYVGSLLMPPLFGIIAQYVTISLYPWYLLVLLVLMVAMHE RLRKLRG
Specific function: Unknown
COG id: COG0738
COG function: function code G; Fucose permease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43192; Mature: 43061
Theoretical pI: Translated: 8.61; Mature: 8.61
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAILLLAVIYVAFISLGLPDSLLGSAWPTMSQNLNVPVAWAGGISAVISMFTIVSALLSD CHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHCC RMTLKFGAGKVTAVSVALTAAALAGFSIAPNYWVLLAIAIPYGLGAGGVDAALNNYVAIH CCEEEECCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCHHHHHCCEEEEE YESRHMSWLHCMWGVGASVGPYIMGYALSQGQGWPWGYRYIAILQVMLTVILVLSLPLWK ECCCCHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHH KRGTTGGGESTDGAASSDGNAEGCGNAEGASVAERKPLGVAGVLAIRGAKEILVMFFCYC CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHCCHHHHHHHHHHHH AIESTAGLWASSYMVMHSGIDKITAASWAGLFYVGITVGRALSGFLSMRFKDPVMIRLGQ HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH VLVLAGILTMFVPLPHHLGVVVGLVVIGFGCAPIYPCVIHSTPAYFGEDKSQAVVGVQMA HHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH CAYVGSLLMPPLFGIIAQYVTISLYPWYLLVLLVLMVAMHERLRKLRG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AILLLAVIYVAFISLGLPDSLLGSAWPTMSQNLNVPVAWAGGISAVISMFTIVSALLSD HHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHCC RMTLKFGAGKVTAVSVALTAAALAGFSIAPNYWVLLAIAIPYGLGAGGVDAALNNYVAIH CCEEEECCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCHHHHHCCEEEEE YESRHMSWLHCMWGVGASVGPYIMGYALSQGQGWPWGYRYIAILQVMLTVILVLSLPLWK ECCCCHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHH KRGTTGGGESTDGAASSDGNAEGCGNAEGASVAERKPLGVAGVLAIRGAKEILVMFFCYC CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHCCHHHHHHHHHHHH AIESTAGLWASSYMVMHSGIDKITAASWAGLFYVGITVGRALSGFLSMRFKDPVMIRLGQ HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH VLVLAGILTMFVPLPHHLGVVVGLVVIGFGCAPIYPCVIHSTPAYFGEDKSQAVVGVQMA HHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH CAYVGSLLMPPLFGIIAQYVTISLYPWYLLVLLVLMVAMHERLRKLRG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA