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The map label for this gene is oppA [H]

Identifier: 213691762

GI number: 213691762

Start: 1025935

End: 1027560

Strand: Direct

Name: oppA [H]

Synonym: Blon_0870

Alternate gene names: 213691762

Gene position: 1025935-1027560 (Clockwise)

Preceding gene: 213691761

Following gene: 213691763

Centisome position: 36.22

GC content: 62.48

Gene sequence:

>1626_bases
GTGCATTCCAAGAAGATTCTGGCCGCCATCGCTTCCGTGGCCGCCATCGCGTCCCTCGCCGCATGCGGCGGCGTGAAGGA
TGATGCCGCCACGGCCGGCGGCAGCTCCGCCGTCACCATCGGCACCACCGACAAGATCACCAGCCTCGATCCGGCCGGAT
CCTACGACAACGGCTCCTACGCCGTGCAGATTCAGGTGTTCCCGTTCCTGTACGCCCAGAACTACAACACCTCCGAACTG
TCTGCCGACATCGCCGCCGACAACGGCACCTGGAACGCGGACGGCACCCAGTTCACCGTCAAACTCAAGAAGGGTCTGAA
ATTCGCCAACGGCAATGACCTGACCGCCTCCGACGTGAAGTTCTCCTACGATCGCGTCAAGAAGATCAACGACGAGAACG
GGCCGAGTTCGCTGCTGGCCAACATCACCGACGTCAAGGCCGTGGACGACACCACCGTGGTGTTCACCGACGCCGTGCCT
TTCGACGTGACCCTGAAGCAGGTCATGAGCTCCCCGGCCGGTCCGATCGTCGACGAGGACTCCTTCGCCGCCGACAAGCT
GACCGACGCCGACACCATCGTGTCCAAGAAGGCCTTCGCCGGCCCCTACTCGTTGACCTCCTTCAAACTCAACGAGACGG
CCGCCTACGAGAAGAACGCCGACTATCAAGGCCTGACCCCCGCCAAGAACGCCGCGGTGCAGGTCAAGTACTTCGCCGAC
GCCTCCAACCTGAAGATGGCCGTGCAGCAGGGGCAGGTCGATGTCGCCTACCGCTCCCTGACCCCGACCGACATCGAGGA
CCTGTCCAAGGACTCCAAGCTGCAGGTCATCAAGGGACCGGGCGGCGAGGAGCGTCTGCTCGTCTTCAACATGAAGATCC
AGCCCTTCGGCGAATCCCAGCCCAACGCCGACGCCAACAAGGCCAAGGCGGTGCGCCAGGCCGTCGCCAACCTGATCGAC
CGTGACGAACTGGCCACCAAGGTCTACAAGAAGACCTACACCCCGATGTACTCCTACATCCCCGATGGCCTTGCCGGCCA
CGAGGACACGTTGAAGGCCGCCTACGGCGAGAACGGCAAGCCCTCCGTCGACAAGGCCAGGAAGGCGCTCAAGGACGCCG
GCGTGACCACTCCGGTCGACCTGAAACTGCAGTACAACGGCGACCATTACGGTTCCTCCTCCGCTGACGAGTACGCCGCG
ATCAAGTCCCAGCTCGAGGAGGGCGGCCTATTCTCCGTCGACTTGCAGCAGACCGAATGGACTCAGTACAACAAGGACCG
TGTGGTCACCAAGGATTCCGACGGCGCATACCCGGTCTACCAGCTCGGCTGGTTCCCGGACTACTCCGATCCGGACAACT
ACCTTTCCCCGTTCTTCCGCGACGGCAACTTCGTGAACAACGGATACTCCAACAAGGAGATCAACGACCTCATCGTCAAG
CAGGCCGTCCAAACCGACGAGAACGCCCGAGCCGAGACCCTGAAGCAGATTCAGCGGCTCGAAACCGACGATCTGTCCAC
CATCCCGCTGCTGCAGGGTGCTCAGACCGCCGTCGCCGGCTCGAACGTGAAGGGCGTCGTGCTTGACGCATCCTTCCGCT
TCCGCTACTCCTCCGTCACCAAGTGA

Upstream 100 bases:

>100_bases
CGATTCGGAAACGCACGGTTAACAAACCGGGGCGATAGTCGGCGGAAAGGCCGTGTCCACAGCACAGGCGCGGCGATGCC
ATTACAGAGAGAGGACTCCC

Downstream 100 bases:

>100_bases
CCTGCATGCTCCCCGACGGGAGCCATCCGCCGCAAGGCGGGAGAAGGGAGAGCGCGCGTAACGGGCATTCGCCCGGCGCG
TCTCTCCCTTCCGGCGTTGC

Product: extracellular solute-binding protein, family 5

Products: NA

Alternate protein names: Stage 0 sporulation protein KA [H]

Number of amino acids: Translated: 541; Mature: 541

Protein sequence:

>541_residues
MHSKKILAAIASVAAIASLAACGGVKDDAATAGGSSAVTIGTTDKITSLDPAGSYDNGSYAVQIQVFPFLYAQNYNTSEL
SADIAADNGTWNADGTQFTVKLKKGLKFANGNDLTASDVKFSYDRVKKINDENGPSSLLANITDVKAVDDTTVVFTDAVP
FDVTLKQVMSSPAGPIVDEDSFAADKLTDADTIVSKKAFAGPYSLTSFKLNETAAYEKNADYQGLTPAKNAAVQVKYFAD
ASNLKMAVQQGQVDVAYRSLTPTDIEDLSKDSKLQVIKGPGGEERLLVFNMKIQPFGESQPNADANKAKAVRQAVANLID
RDELATKVYKKTYTPMYSYIPDGLAGHEDTLKAAYGENGKPSVDKARKALKDAGVTTPVDLKLQYNGDHYGSSSADEYAA
IKSQLEEGGLFSVDLQQTEWTQYNKDRVVTKDSDGAYPVYQLGWFPDYSDPDNYLSPFFRDGNFVNNGYSNKEINDLIVK
QAVQTDENARAETLKQIQRLETDDLSTIPLLQGAQTAVAGSNVKGVVLDASFRFRYSSVTK

Sequences:

>Translated_541_residues
MHSKKILAAIASVAAIASLAACGGVKDDAATAGGSSAVTIGTTDKITSLDPAGSYDNGSYAVQIQVFPFLYAQNYNTSEL
SADIAADNGTWNADGTQFTVKLKKGLKFANGNDLTASDVKFSYDRVKKINDENGPSSLLANITDVKAVDDTTVVFTDAVP
FDVTLKQVMSSPAGPIVDEDSFAADKLTDADTIVSKKAFAGPYSLTSFKLNETAAYEKNADYQGLTPAKNAAVQVKYFAD
ASNLKMAVQQGQVDVAYRSLTPTDIEDLSKDSKLQVIKGPGGEERLLVFNMKIQPFGESQPNADANKAKAVRQAVANLID
RDELATKVYKKTYTPMYSYIPDGLAGHEDTLKAAYGENGKPSVDKARKALKDAGVTTPVDLKLQYNGDHYGSSSADEYAA
IKSQLEEGGLFSVDLQQTEWTQYNKDRVVTKDSDGAYPVYQLGWFPDYSDPDNYLSPFFRDGNFVNNGYSNKEINDLIVK
QAVQTDENARAETLKQIQRLETDDLSTIPLLQGAQTAVAGSNVKGVVLDASFRFRYSSVTK
>Mature_541_residues
MHSKKILAAIASVAAIASLAACGGVKDDAATAGGSSAVTIGTTDKITSLDPAGSYDNGSYAVQIQVFPFLYAQNYNTSEL
SADIAADNGTWNADGTQFTVKLKKGLKFANGNDLTASDVKFSYDRVKKINDENGPSSLLANITDVKAVDDTTVVFTDAVP
FDVTLKQVMSSPAGPIVDEDSFAADKLTDADTIVSKKAFAGPYSLTSFKLNETAAYEKNADYQGLTPAKNAAVQVKYFAD
ASNLKMAVQQGQVDVAYRSLTPTDIEDLSKDSKLQVIKGPGGEERLLVFNMKIQPFGESQPNADANKAKAVRQAVANLID
RDELATKVYKKTYTPMYSYIPDGLAGHEDTLKAAYGENGKPSVDKARKALKDAGVTTPVDLKLQYNGDHYGSSSADEYAA
IKSQLEEGGLFSVDLQQTEWTQYNKDRVVTKDSDGAYPVYQLGWFPDYSDPDNYLSPFFRDGNFVNNGYSNKEINDLIVK
QAVQTDENARAETLKQIQRLETDDLSTIPLLQGAQTAVAGSNVKGVVLDASFRFRYSSVTK

Specific function: This protein is a component of the oligopeptide permease, a binding protein-dependent transport system, It binds peptides up to five amino acids long with high affinity. Also required for sporulation and competence [H]

COG id: COG0747

COG function: function code E; ABC-type dipeptide transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI1787762, Length=502, Percent_Identity=23.9043824701195, Blast_Score=104, Evalue=2e-23,
Organism=Escherichia coli, GI1787052, Length=536, Percent_Identity=24.0671641791045, Blast_Score=101, Evalue=2e-22,
Organism=Escherichia coli, GI1789966, Length=490, Percent_Identity=23.6734693877551, Blast_Score=94, Evalue=2e-20,
Organism=Escherichia coli, GI1787495, Length=443, Percent_Identity=24.3792325056433, Blast_Score=87, Evalue=3e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 58396; Mature: 58396

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHSKKILAAIASVAAIASLAACGGVKDDAATAGGSSAVTIGTTDKITSLDPAGSYDNGSY
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCE
AVQIQVFPFLYAQNYNTSELSADIAADNGTWNADGTQFTVKLKKGLKFANGNDLTASDVK
EEEEEEEEEEEECCCCHHHCEEEEECCCCCCCCCCCEEEEEEECCCEECCCCCCCCCCCE
FSYDRVKKINDENGPSSLLANITDVKAVDDTTVVFTDAVPFDVTLKQVMSSPAGPIVDED
ECHHHHHHCCCCCCHHHHHHHHHHCEECCCCEEEEECCCCCHHHHHHHHCCCCCCCCCCC
SFAADKLTDADTIVSKKAFAGPYSLTSFKLNETAAYEKNADYQGLTPAKNAAVQVKYFAD
CCCHHCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECC
ASNLKMAVQQGQVDVAYRSLTPTDIEDLSKDSKLQVIKGPGGEERLLVFNMKIQPFGESQ
CCCHHHHHHCCCEEEEEECCCCCCHHHCCCCCCEEEEECCCCCCEEEEEEEEECCCCCCC
PNADANKAKAVRQAVANLIDRDELATKVYKKTYTPMYSYIPDGLAGHEDTLKAAYGENGK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCHHHHHHHCCCCCC
PSVDKARKALKDAGVTTPVDLKLQYNGDHYGSSSADEYAAIKSQLEEGGLFSVDLQQTEW
CCHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCC
TQYNKDRVVTKDSDGAYPVYQLGWFPDYSDPDNYLSPFFRDGNFVNNGYSNKEINDLIVK
CCCCCCEEEEECCCCCCCEEEECCCCCCCCCHHHHCHHHCCCCEECCCCCCCHHHHHHHH
QAVQTDENARAETLKQIQRLETDDLSTIPLLQGAQTAVAGSNVKGVVLDASFRFRYSSVT
HHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCCCEEEEECEEEEEECCCC
K
C
>Mature Secondary Structure
MHSKKILAAIASVAAIASLAACGGVKDDAATAGGSSAVTIGTTDKITSLDPAGSYDNGSY
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCE
AVQIQVFPFLYAQNYNTSELSADIAADNGTWNADGTQFTVKLKKGLKFANGNDLTASDVK
EEEEEEEEEEEECCCCHHHCEEEEECCCCCCCCCCCEEEEEEECCCEECCCCCCCCCCCE
FSYDRVKKINDENGPSSLLANITDVKAVDDTTVVFTDAVPFDVTLKQVMSSPAGPIVDED
ECHHHHHHCCCCCCHHHHHHHHHHCEECCCCEEEEECCCCCHHHHHHHHCCCCCCCCCCC
SFAADKLTDADTIVSKKAFAGPYSLTSFKLNETAAYEKNADYQGLTPAKNAAVQVKYFAD
CCCHHCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECC
ASNLKMAVQQGQVDVAYRSLTPTDIEDLSKDSKLQVIKGPGGEERLLVFNMKIQPFGESQ
CCCHHHHHHCCCEEEEEECCCCCCHHHCCCCCCEEEEECCCCCCEEEEEEEEECCCCCCC
PNADANKAKAVRQAVANLIDRDELATKVYKKTYTPMYSYIPDGLAGHEDTLKAAYGENGK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCHHHHHHHCCCCCC
PSVDKARKALKDAGVTTPVDLKLQYNGDHYGSSSADEYAAIKSQLEEGGLFSVDLQQTEW
CCHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCC
TQYNKDRVVTKDSDGAYPVYQLGWFPDYSDPDNYLSPFFRDGNFVNNGYSNKEINDLIVK
CCCCCCEEEEECCCCCCCEEEECCCCCCCCCHHHHCHHHCCCCEECCCCCCCHHHHHHHH
QAVQTDENARAETLKQIQRLETDDLSTIPLLQGAQTAVAGSNVKGVVLDASFRFRYSSVT
HHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCCCEEEEECEEEEEECCCC
K
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1901616; 1899858; 9384377 [H]