| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691688
Identifier: 213691688
GI number: 213691688
Start: 919474
End: 919851
Strand: Reverse
Name: 213691688
Synonym: Blon_0793
Alternate gene names: NA
Gene position: 919851-919474 (Counterclockwise)
Preceding gene: 213691689
Following gene: 213691686
Centisome position: 32.47
GC content: 61.9
Gene sequence:
>378_bases ATGGTTCTTGACCGTAATGCCGTTACCCAGGAAGTGCCGATCGACCCGGAAACCGGCAAACCGTACCTCAATACCGTGGC CGCCATCCAGGTGTCGGCCAATGGCGTGGGCTCCGAGGTCTCGCCATACGTGGCTCAGGCCGTCGAAGTGATTCGCGAAT CCGGCCTGCCGCAGGAAACCAACGCCCTGTTCACCAACGTGGAAGGCAATCTGGACGACGTGCTCAAGGTGGCCGGTGAG GCCGCCAAGAAGCTCGCCGAGCAGGGCTACCGCACTTCTCTGGTGCTGCACATGGATATCCGTCCCGGTTTCACCGGCCA GCTGACCGAAAAGCCCAAGCTGGTGGACGAGATCCTCGCCGACAAGCGGGCGAAGTAG
Upstream 100 bases:
>100_bases CTCCGGCCCGATGGATCATCTCTGGAAGTATCGCTGACATAAGTGTGGTTGTTAAGCTCCCCCTGTCAGGGGAGCTTAAC ACTACTGAAAAAGGAGAATC
Downstream 100 bases:
>100_bases CAAAGCATTGCTTCCACCAGCAAGGGCATGCTTTGTTATTACACGTTTCATGGGGCGGTAGCTCACCCATGGGGCGGTAA ATATCTCATGGGGCGGTAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 125; Mature: 125
Protein sequence:
>125_residues MVLDRNAVTQEVPIDPETGKPYLNTVAAIQVSANGVGSEVSPYVAQAVEVIRESGLPQETNALFTNVEGNLDDVLKVAGE AAKKLAEQGYRTSLVLHMDIRPGFTGQLTEKPKLVDEILADKRAK
Sequences:
>Translated_125_residues MVLDRNAVTQEVPIDPETGKPYLNTVAAIQVSANGVGSEVSPYVAQAVEVIRESGLPQETNALFTNVEGNLDDVLKVAGE AAKKLAEQGYRTSLVLHMDIRPGFTGQLTEKPKLVDEILADKRAK >Mature_125_residues MVLDRNAVTQEVPIDPETGKPYLNTVAAIQVSANGVGSEVSPYVAQAVEVIRESGLPQETNALFTNVEGNLDDVLKVAGE AAKKLAEQGYRTSLVLHMDIRPGFTGQLTEKPKLVDEILADKRAK
Specific function: Unknown
COG id: COG0011
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13459; Mature: 13459
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLDRNAVTQEVPIDPETGKPYLNTVAAIQVSANGVGSEVSPYVAQAVEVIRESGLPQET CCCCCCCCCCCCCCCCCCCCHHHHHEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCC NALFTNVEGNLDDVLKVAGEAAKKLAEQGYRTSLVLHMDIRPGFTGQLTEKPKLVDEILA CCEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHH DKRAK HCCCC >Mature Secondary Structure MVLDRNAVTQEVPIDPETGKPYLNTVAAIQVSANGVGSEVSPYVAQAVEVIRESGLPQET CCCCCCCCCCCCCCCCCCCCHHHHHEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCC NALFTNVEGNLDDVLKVAGEAAKKLAEQGYRTSLVLHMDIRPGFTGQLTEKPKLVDEILA CCEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHH DKRAK HCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA