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The map label for this gene is recO

Identifier: 213691677

GI number: 213691677

Start: 907076

End: 907795

Strand: Direct

Name: recO

Synonym: Blon_0782

Alternate gene names: 213691677

Gene position: 907076-907795 (Clockwise)

Preceding gene: 213691676

Following gene: 213691678

Centisome position: 32.02

GC content: 64.86

Gene sequence:

>720_bases
ATGTCACTGTACCGAGATGAAGGCGTGGTGTTACGCACGTCCAAGCTGGCGGAGGCCGATCGCATCATCACCGTCCTGAC
GCGCGACCATGGCAAGATCCGGGCGGTAGCCAAGGGCGTGCGCCGCACCAAATCGCGCTTCGGCGCCCGGCTTGAGCCGT
TCATGCGCGTCGATCTGCTGATCGCCGAAGGCCGATCGTTGGATACGGTTTCCCAGGCCGAGTCGATCGCCGCGTACGGT
GCCGCGATCGTCGGGGACTATGCGGCGTATGAGGCCGCGAACGTCATCGTCGAAACCATCGACAAGCTCGTCGGCACGGA
ACGTGAGCGCATGACGGACCAGTATCGGCTCCTGATCGGCGCGTTGAACGCGCTCGCCAAACGCGCCCACGCCCCGCAGG
CCATAGGCTGCTCCTATGTGATGCGCGCCCTGGCACTGGCCGGTTGGACGCCGCGTCTGGGCACATGCGTGGTGTGCGGT
GCGGCGGCGCCGGCGTATCTGTCGATCGCATCCGGCGGCGTGATGTGCGAGGCCGACCACACCACGGACGCGCGTCGCAT
CGCGCCGTCCGCATTGGGTCAGTTCGATGCGCTGGTCCATGGTGATTGGACGGTGCTTGACGCCGCACCGGTGGAGCGGG
TCGTACGGGAGTTGGTTGAAGATTGGGGGGAGTATTACCTTGAACGGCCGATTCGTTCGCTGCGCTTGATAGATTCGTAG

Upstream 100 bases:

>100_bases
TGTGCATACTCCTGGTGTTCGCCTTCTGGGGACTGTTCGTCTACTGATCGACGACGCCGGGTGCCCGCCGTTCACCGGGT
CCCGCCGCAAGGGGAACGAA

Downstream 100 bases:

>100_bases
GTATGGCTTTTGAGAACGTTGATTACACCTCGCTGAACATCCCCGCGGCCCCATTCAGCGACCCCGCCCGTATTCCCGAC
TTCCCCAAGAACAAAGTGCC

Product: DNA repair protein RecO

Products: NA

Alternate protein names: Recombination protein O

Number of amino acids: Translated: 239; Mature: 238

Protein sequence:

>239_residues
MSLYRDEGVVLRTSKLAEADRIITVLTRDHGKIRAVAKGVRRTKSRFGARLEPFMRVDLLIAEGRSLDTVSQAESIAAYG
AAIVGDYAAYEAANVIVETIDKLVGTERERMTDQYRLLIGALNALAKRAHAPQAIGCSYVMRALALAGWTPRLGTCVVCG
AAAPAYLSIASGGVMCEADHTTDARRIAPSALGQFDALVHGDWTVLDAAPVERVVRELVEDWGEYYLERPIRSLRLIDS

Sequences:

>Translated_239_residues
MSLYRDEGVVLRTSKLAEADRIITVLTRDHGKIRAVAKGVRRTKSRFGARLEPFMRVDLLIAEGRSLDTVSQAESIAAYG
AAIVGDYAAYEAANVIVETIDKLVGTERERMTDQYRLLIGALNALAKRAHAPQAIGCSYVMRALALAGWTPRLGTCVVCG
AAAPAYLSIASGGVMCEADHTTDARRIAPSALGQFDALVHGDWTVLDAAPVERVVRELVEDWGEYYLERPIRSLRLIDS
>Mature_238_residues
SLYRDEGVVLRTSKLAEADRIITVLTRDHGKIRAVAKGVRRTKSRFGARLEPFMRVDLLIAEGRSLDTVSQAESIAAYGA
AIVGDYAAYEAANVIVETIDKLVGTERERMTDQYRLLIGALNALAKRAHAPQAIGCSYVMRALALAGWTPRLGTCVVCGA
AAPAYLSIASGGVMCEADHTTDARRIAPSALGQFDALVHGDWTVLDAAPVERVVRELVEDWGEYYLERPIRSLRLIDS

Specific function: Involved in DNA repair and recF pathway recombination

COG id: COG1381

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recO family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RECO_BIFLI (B7GQ05)

Other databases:

- EMBL:   CP001095
- RefSeq:   YP_002322263.1
- GeneID:   7054813
- GenomeReviews:   CP001095_GR
- KEGG:   bln:Blon_0782
- HOGENOM:   HBG634481
- ProtClustDB:   PRK00085
- HAMAP:   MF_00201
- InterPro:   IPR001164
- InterPro:   IPR022572
- InterPro:   IPR016027
- InterPro:   IPR003717
- TIGRFAMs:   TIGR00613

Pfam domain/function: PF02565 RecO; PF11967 RecO_N; SSF57863 ArfGAP; SSF50249 Nucleic_acid_OB

EC number: NA

Molecular weight: Translated: 26032; Mature: 25901

Theoretical pI: Translated: 7.45; Mature: 7.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLYRDEGVVLRTSKLAEADRIITVLTRDHGKIRAVAKGVRRTKSRFGARLEPFMRVDLL
CCCCCCCCEEEEHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
IAEGRSLDTVSQAESIAAYGAAIVGDYAAYEAANVIVETIDKLVGTERERMTDQYRLLIG
EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
ALNALAKRAHAPQAIGCSYVMRALALAGWTPRLGTCVVCGAAAPAYLSIASGGVMCEADH
HHHHHHHHHCCCHHCCHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHEECCCCEEEECCC
TTDARRIAPSALGQFDALVHGDWTVLDAAPVERVVRELVEDWGEYYLERPIRSLRLIDS
CCCHHHHCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SLYRDEGVVLRTSKLAEADRIITVLTRDHGKIRAVAKGVRRTKSRFGARLEPFMRVDLL
CCCCCCCEEEEHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
IAEGRSLDTVSQAESIAAYGAAIVGDYAAYEAANVIVETIDKLVGTERERMTDQYRLLIG
EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
ALNALAKRAHAPQAIGCSYVMRALALAGWTPRLGTCVVCGAAAPAYLSIASGGVMCEADH
HHHHHHHHHCCCHHCCHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHEECCCCEEEECCC
TTDARRIAPSALGQFDALVHGDWTVLDAAPVERVVRELVEDWGEYYLERPIRSLRLIDS
CCCHHHHCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA